Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq768 113 3e-20
seq558 105 4e-18
>seq768
Length=1243675
Score = 113 bits (124), Expect = 3e-20
Identities = 170/235 (72%), Gaps = 14/235 (6%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| ||||||| |||||||| ||| | || || || || ||||||||||| |
Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| || |||| ||||||||||| || || ||||| || ||||||||||| ||
Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCG-GTCGATTCGAC 34341
| || ||||||||| ||| || ||||| || ||| ||| |||| |||| || |
Sbjct 1130816 ATGCCCTCCTTGTCCTGGATC-TTAGCTTT-GA--CGCTCTCG-ATCGTGTCGTTTGG-- 1130868
Query 34342 GTCCACC------GTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||||| |||||| | || || ||||| || ||||| ||||| ||||||
Sbjct 1130869 GTCCACCTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCATC 1130923
>seq558
Length=611125
Score = 105 bits (116), Expect = 4e-18
Identities = 167/233 (72%), Gaps = 10/233 (4%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||||||||| | ||| |||| ||| | ||| |||||||| ||||||||||| |
Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| || ||||||| | |||||| || || || || | ||||||||||| ||
Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCG-GTCGAT----T 34337
| || ||| ||||| ||| || ||||| || ||| ||| |||| |||| | |
Sbjct 303820 ATGCCCTCTTTGTCCTGGATC-TTAGCTTT-GA--CGCTCTCG-ATCGTGTCGTTTGGGT 303766
Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
| || || | ||| ||| | ||||| ||||| || || ||||| |||||||||
Sbjct 303765 CCACTTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCATC 303713
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323066794704320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |