Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq458 188 6e-43
>seq458
Length=503182
Score = 188 bits (208), Expect = 6e-43
Identities = 283/399 (71%), Gaps = 5/399 (1%)
Strand=Plus/Minus
Query 19960 AATGGTGTACAAAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAA 20019
||||||| |||||| ||||| ||||| || || || |||| | || || | |||
Sbjct 281111 AATGGTGCCGAAAAAAATGATCGTACCGGTACGGGTACAATATCATTGTTCGGTACACAA 281052
Query 20020 TCTCGATATA-ACTTGAGAAATGAA---TTTCCCTTATTAACTACGAAACGGGTATTTTG 20075
||| ||| |||| | ||| || || || || | || || ||||| ||||||||
Sbjct 281051 AATCGTTATTCACTTC-GTAATCAAACATTACCATTGATCACAACAAAACGTGTATTTTG 280993
Query 20076 GAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCT 20135
| || ||||||||||| |||||||||||||| ||||| ||||| |||| | | |
Sbjct 280992 GCGTGGTGTTGTTGAAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATT 280933
Query 20136 TGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAA 20195
|||||||| || || |||||| ||| |||| || || ||||| | | ||
Sbjct 280932 ATCCGAAAAAGGTGTAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCT 280873
Query 20196 TGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACA 20255
||| ||| | |||||||| || ||| | |||||||| ||||| ||||||||||||||
Sbjct 280872 TGGTTTTATTGATCGTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACA 280813
Query 20256 TTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT 20315
|||||| || |||||| ||| | | || ||||| ||| ||||| | ||||||||
Sbjct 280812 TTTTGGTGCCGAATATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATT 280753
Query 20316 ACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGA 20354
| || | |||| || ||| ||||| || ||||| ||
Sbjct 280752 AAAACAGCTTATAAAAACAATCAAAACAAATCCAAATGA 280714
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/103 (80%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTA 20446
|||| | ||| ||||||||| || ||||||||| || | || |||||||| || ||
Sbjct 280623 AGATCTTCCTAAAATGGCTTTACCACCATGTCAT-TGTTTGGCACAATTTTATGTCTGTA 280565
Query 20447 ATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489
|| ||||| | || |||||| | ||||||||||||||||||||
Sbjct 280564 ATGATGAACTTTCCTGTCAACTTTATCAACGATCCGCTGATAT 280522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399177568397290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |