Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq458 188 6e-43 >seq458 Length=503182 Score = 188 bits (208), Expect = 6e-43 Identities = 283/399 (71%), Gaps = 5/399 (1%) Strand=Plus/Minus Query 19960 AATGGTGTACAAAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAA 20019 ||||||| |||||| ||||| ||||| || || || |||| | || || | ||| Sbjct 281111 AATGGTGCCGAAAAAAATGATCGTACCGGTACGGGTACAATATCATTGTTCGGTACACAA 281052 Query 20020 TCTCGATATA-ACTTGAGAAATGAA---TTTCCCTTATTAACTACGAAACGGGTATTTTG 20075 ||| ||| |||| | ||| || || || || | || || ||||| |||||||| Sbjct 281051 AATCGTTATTCACTTC-GTAATCAAACATTACCATTGATCACAACAAAACGTGTATTTTG 280993 Query 20076 GAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCT 20135 | || ||||||||||| |||||||||||||| ||||| ||||| |||| | | | Sbjct 280992 GCGTGGTGTTGTTGAAGAATTATTATGGTTTATAAAAGGTTCAACTGATTCGAAAAAATT 280933 Query 20136 TGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAA 20195 |||||||| || || |||||| ||| |||| || || ||||| | | || Sbjct 280932 ATCCGAAAAAGGTGTAAAAATTTGGGATGCAAATGGTTCAAAAGAATTTCTTGATAGTCT 280873 Query 20196 TGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACA 20255 ||| ||| | |||||||| || ||| | |||||||| ||||| |||||||||||||| Sbjct 280872 TGGTTTTATTGATCGTCAAGAAGGTGATCTAGGTCCTGTTTATGGTTTTCAATGGAGACA 280813 Query 20256 TTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATT 20315 |||||| || |||||| ||| | | || ||||| ||| ||||| | |||||||| Sbjct 280812 TTTTGGTGCCGAATATCGTGATAATCAAACTGATTATAATGGTCAAGGTATTGATCAATT 280753 Query 20316 ACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGA 20354 | || | |||| || ||| ||||| || ||||| || Sbjct 280752 AAAACAGCTTATAAAAACAATCAAAACAAATCCAAATGA 280714 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTA 20446 |||| | ||| ||||||||| || ||||||||| || | || |||||||| || || Sbjct 280623 AGATCTTCCTAAAATGGCTTTACCACCATGTCAT-TGTTTGGCACAATTTTATGTCTGTA 280565 Query 20447 ATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489 || ||||| | || |||||| | |||||||||||||||||||| Sbjct 280564 ATGATGAACTTTCCTGTCAACTTTATCAACGATCCGCTGATAT 280522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399177568397290