Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq335 154 3e-32
>seq335
Length=939964
Score = 154 bits (170), Expect = 3e-32
Identities = 619/961 (64%), Gaps = 28/961 (3%)
Strand=Plus/Plus
Query 248782 CTGGACGGCGCGATTGACTACGGCAAA-GATTTGGAGTACGATTTCTTTGCTTTCAAAAC 248840
||||||| ||||| | || |||| || || || |||| ||| | ||| | ||||| ||
Sbjct 178600 CTGGACGCGGCGATCGTCT-CGGCGAACGACTTCGAGTTCGACTACTTCGGCTTCAAGAC 178658
Query 248841 GCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACAT 248900
||| ||| ||||| || || || | |||||||| || || ||| ||||
Sbjct 178659 GCTCGAGCGCTCGTACCTGCTGAAGGCGAACAAAAAGATCGTCGAGCGGCCGCAGTACAT 178718
Query 248901 GTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTA 248960
||| ||||| ||| | |||| ||| ||| || ||| | | | | | ||||||||
Sbjct 178719 GTTCATGCGCGTGTCGGTCGCGATCCACTTGGGCGACTTGCCGCGGATTTTGGAGACGTA 178778
Query 248961 CACCGGAATGA-GTGAACGCTGGATGACA--CATGCCACACCGACGCTCTTCAACGCCGG 249017
| ||| ||| || | | | || || || || |||||||| |||||||||||
Sbjct 178779 C--CGGC-TGATGTCGAGCAAGTTTTTCATCCACGCGACGCCGACGCTGTTCAACGCCGG 178835
Query 249018 T----ACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTG 249073
| || ||||| ||| | |||||||| || ||| ||||||||
Sbjct 178836 GCTGAAGCGGCAACA----GCTCTCCAGCTGCTTTCTGCTGCAGATGGCCGACGACTCGA 178891
Query 249074 TCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAA 249133
|||| ||||||| |||||||| || || ||| ||| || | ||| ||||| |
Sbjct 178892 TCGAGGGCATTTTCGACACGCTGAAGGAGTGCGCGGTGATCAGCAAGTACGCTGGCGGGA 178951
Query 249134 TCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGG 249193
|||| ||| | || ||| ||||| |||| | |||||||| || || || |||
Sbjct 178952 TCGGGCTCGCGATCCACAAGATCCGCGCGACGAACGCGTACATCGCGGGCACGAACGGGC 179011
Query 249194 TCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACC 249253
||| | || ||||| || | || || || | | ||||| | | | || |||
Sbjct 179012 GCAGCAACGGGATCGTGCCGATGCTGCGCGTGTTCAACGCGACCGCGCGCTACGTCGACC 179071
Query 249254 AGGCCGGGCGC---CG-AAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGAT 249309
||| ||| || || ||||| | | ||||| || || |||| ||||||||| ||
Sbjct 179072 AGGGCGGCGGCAAGCGCAAAGGCGGC-TTCGCGATCTACCTGGAGCCGTGGCACGCAGAC 179130
Query 249310 ATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGAC 249369
|| || |||||| | || || ||| |||||||||| || | |||| |||
Sbjct 179131 ATCTTCGAGTTCATCGAGCTGCGGCGCAACCACGGCAACGAAGAGTTGCGCACGCGGGAC 179190
Query 249370 CTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGAT 249429
|||||| || |||| || ||||||||||||||||||||| | | |||||||
Sbjct 179191 CTCTTCCTGGGGCTGTACATCAACGACTTGTTCATGCGCCGCGTGGACGAAGACGGCGTG 179250
Query 249430 TGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTC 249489
|||| || | | ||| | | | |||| | | |||| | ||||| || |||
Sbjct 179251 TGGAGTCTGATGTGTCCCGCGCAGTCGCCGGGCTTGTTCGAAGTCTGGGGCGCGGAGTTC 179310
Query 249490 GACCAAGCCTATAAGAAATACGAATCCAACGGCATCG----GCAAGACA-ATCAAGGCTC 249544
||| || | | ||||| || | ||| || | | || | ||||| |
Sbjct 179311 GACGCGCTGTACACGCGCTACGAGGCCGA--GCAGCGCTTCGTGCGGCAGGTGAAGGCGC 179368
Query 249545 GGACCCTTTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTATTTGT 249604
| | || | || | ||| | | ||||| ||||| || ||||| | |||
Sbjct 179369 GCGCGCTCTGGACGGTCATTGTGAACACGCAGATCGAGACGGGCAATCCGTACTTGGTGT 179428
Query 249605 TCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAA 249664
||| |||||||||||| |||| ||||| ||| | || || ||||||| || || |
Sbjct 179429 ACAAGGACGCGTGCAACCGCAAGTCGAACCAGCGGAACCTCGGCACCATCCAGTCCTCGA 179488
Query 249665 ATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGG 249724
| || || | || ||| | || ||| |||| |||||||| || || |||||||| |
Sbjct 179489 ACCTGTGCACGGAAGTGGTGCAGTACACGTCGCGCGAGGAGATCGCGGTGTGCAACCTCG 179548
Query 249725 C 249725
|
Sbjct 179549 C 179549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073748212410496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |