Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq213 91.5 2e-13
>seq213
Length=107296
Score = 91.5 bits (100), Expect = 2e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 118183 CACCATTGAAAATCTAAACCTTTAGCAACAGAAAACGCAATTCCAGAATAAGAATATCTA 118242
||||| | ||||||||||||||||||| | | | || | |||||||| ||||||| |
Sbjct 8973 CACCAATCAAAATCTAAACCTTTAGCACTGGTATAGGCTACACCAGAATATGAATATCGA 8914
Query 118243 TCAATAATGACTGTAATACC-ATTAAGAATATTTGTTTTAATTGTATCGATAATTTCCCA 118301
||||||| | |||| |||| | | |||| | | | ||| ||| | |||||||
Sbjct 8913 TCAATAACTAATGTAGTACCGGCTTTTATCATTTCTATCATTTG-ATCAAATTTTTCCCA 8855
Query 118302 TCTATTTTTAGAAAATAAAATGTGAATATCTTCATCAGACAAATAAATTTTTCCTTTTAA 118361
|| ||| || ||||| | |||||| | | |||| || | | ||| ||| ||||
Sbjct 8854 TCGATTAGCAGTGAATAACAAATGAATAACATGATCATTTAATTTAGTTTGTCCACTTAA 8795
Query 118362 ATATTGATCTATTAATTTTCCTGT 118385
|||||||| |||| ||||| ||
Sbjct 8794 ATATTGATTGATTAGATTTCCAGT 8771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679803166067040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |