Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq213 91.5 2e-13 >seq213 Length=107296 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 118183 CACCATTGAAAATCTAAACCTTTAGCAACAGAAAACGCAATTCCAGAATAAGAATATCTA 118242 ||||| | ||||||||||||||||||| | | | || | |||||||| ||||||| | Sbjct 8973 CACCAATCAAAATCTAAACCTTTAGCACTGGTATAGGCTACACCAGAATATGAATATCGA 8914 Query 118243 TCAATAATGACTGTAATACC-ATTAAGAATATTTGTTTTAATTGTATCGATAATTTCCCA 118301 ||||||| | |||| |||| | | |||| | | | ||| ||| | ||||||| Sbjct 8913 TCAATAACTAATGTAGTACCGGCTTTTATCATTTCTATCATTTG-ATCAAATTTTTCCCA 8855 Query 118302 TCTATTTTTAGAAAATAAAATGTGAATATCTTCATCAGACAAATAAATTTTTCCTTTTAA 118361 || ||| || ||||| | |||||| | | |||| || | | ||| ||| |||| Sbjct 8854 TCGATTAGCAGTGAATAACAAATGAATAACATGATCATTTAATTTAGTTTGTCCACTTAA 8795 Query 118362 ATATTGATCTATTAATTTTCCTGT 118385 |||||||| |||| ||||| || Sbjct 8794 ATATTGATTGATTAGATTTCCAGT 8771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679803166067040