Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 3e-25
>seq1
Length=3593316
Score = 131 bits (144), Expect = 3e-25
Identities = 296/439 (67%), Gaps = 7/439 (2%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
|||| |||||||| ||||||||||| || ||| ||| |||| ||| | ||||| |||
Sbjct 929682 TTGCATTTGCTGCTGTTGAAGGAATATTTTTTTCCGGTTCATTTGCAGCAATTTTTTGGC 929741
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| || || | || | |||||||||| |||| || ||||| || ||||| | || |
Sbjct 929742 TAAAAAAACGTGGCCTAATGCCTGGTCTTACCTTTTCAAATGAATTGATTTCACGTGATG 929801
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098
|||| | ||| | || ||||| || | |||| | | | || | || ||||
Sbjct 929802 AAGGATTACATTGTGATTTTGCCTGTCTTTTGTTTCATCA---TATTCGTAATCGTCCAT 929858
Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158
|| | || | ||| |||||||| | | ||| || || ||||||||||||||||| |
Sbjct 929859 CATCACAACGAATTGTTGAAATTATTATTGATGCTGTTAATATTGAACAAGAATTTCTTA 929918
Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGC-AAGTTGATGAGCCAGTACATT 102217
| | | | | || || ||| | || ||||| ||| || || ||| | | || |||
Sbjct 929919 CCGATGCATTACCAGTATCATTGATCGGTATGAA-TGCTAAATTAATGTCCGATTATATT 929977
Query 102218 GAAT-TTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276
|||| |||| || ||| ||||||||||| | | ||||| || ||||| ||
Sbjct 929978 GAATATTGT-GCCGATCGTTTATTGGTTGAATTAGATTGTGAAAAACATTATAAAACAAC 930036
Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336
|| || || || ||||| | || || | || ||| | || |||||||||||
Sbjct 930037 AAATCCATTTGATTTTATGGAACAAATATCATTAGAAGGTAAATCAAATTTTTTTGAAAA 930096
Query 102337 GAGAGTCGCCGAGTATCAA 102355
| || ||||| ||||||
Sbjct 930097 ACGTGTTGCCGAATATCAA 930115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989567238302510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |