Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 131 3e-25 >seq1 Length=3593316 Score = 131 bits (144), Expect = 3e-25 Identities = 296/439 (67%), Gaps = 7/439 (2%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 |||| |||||||| ||||||||||| || ||| ||| |||| ||| | ||||| ||| Sbjct 929682 TTGCATTTGCTGCTGTTGAAGGAATATTTTTTTCCGGTTCATTTGCAGCAATTTTTTGGC 929741 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | || || | || | |||||||||| |||| || ||||| || ||||| | || | Sbjct 929742 TAAAAAAACGTGGCCTAATGCCTGGTCTTACCTTTTCAAATGAATTGATTTCACGTGATG 929801 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098 |||| | ||| | || ||||| || | |||| | | | || | || |||| Sbjct 929802 AAGGATTACATTGTGATTTTGCCTGTCTTTTGTTTCATCA---TATTCGTAATCGTCCAT 929858 Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158 || | || | ||| |||||||| | | ||| || || ||||||||||||||||| | Sbjct 929859 CATCACAACGAATTGTTGAAATTATTATTGATGCTGTTAATATTGAACAAGAATTTCTTA 929918 Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGC-AAGTTGATGAGCCAGTACATT 102217 | | | | | || || ||| | || ||||| ||| || || ||| | | || ||| Sbjct 929919 CCGATGCATTACCAGTATCATTGATCGGTATGAA-TGCTAAATTAATGTCCGATTATATT 929977 Query 102218 GAAT-TTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTAC 102276 |||| |||| || ||| ||||||||||| | | ||||| || ||||| || Sbjct 929978 GAATATTGT-GCCGATCGTTTATTGGTTGAATTAGATTGTGAAAAACATTATAAAACAAC 930036 Query 102277 CAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAA 102336 || || || || ||||| | || || | || ||| | || ||||||||||| Sbjct 930037 AAATCCATTTGATTTTATGGAACAAATATCATTAGAAGGTAAATCAAATTTTTTTGAAAA 930096 Query 102337 GAGAGTCGCCGAGTATCAA 102355 | || ||||| |||||| Sbjct 930097 ACGTGTTGCCGAATATCAA 930115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989567238302510