Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 513 1e-140 seq569 509 2e-139 seq1101 100 3e-16 >seq1 Length=3593316 Score = 513 bits (568), Expect = 1e-140 Identities = 978/1434 (68%), Gaps = 16/1434 (1%) Strand=Plus/Minus Query 37137 AACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAAT 37196 ||||||||| |||||||| | || | |||||| |||||||| | ||||| ||||| || Sbjct 3537859 AACCTGAAATTCTCCAGAAAGAACACGTCTTGTGTATATATTAGTTGTATAAGGTTCGAT 3537800 Query 37197 GGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAG 37256 |||||||| || | | ||||| | || || || || |||||||| || | || | Sbjct 3537799 AGACTCATTGTTGCCAAGAATTTGTGCAGTCGAAGCTGTTGGCATTGGAGCCACAAGCAA 3537740 Query 37257 GCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATC 37316 ||||||| | ||||| | || |||| ||| | |||||||||||||| | ||| Sbjct 3537739 ACTATTTCGTATTCCATATTTAGCGATTCGAGATTTCAAATCATTCCAATCCCAAAGATC 3537680 Query 37317 TGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTT 37376 |||||| || |||||||||| | |||||||| |||||| |||| || | | Sbjct 3537679 TGTTGGTTTTCGATTCCACATATCAAACTGTAGAATGCCTTTAGATACTGGTGATCCTTC 3537620 Query 37377 ATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATA 37436 ||| || ||||| | || | || |||| ||| ||||| | ||||| || |||| Sbjct 3537619 ATAAGTTTCATATTGACCTTTTTCTTGGGCTAATTCACAACTCGTTTCTAATGATCCATA 3537560 Query 37437 ATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATA 37496 ||| |||||||| ||||| || ||||| | | | |||||||| |||||||||| ||| Sbjct 3537559 ATAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTTCACTATCGAATGGATA 3537500 Query 37497 GCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTT 37556 | || || |||||| |||| || || || ||||||||||| || || |||| ||| Sbjct 3537499 ACGCATCAAAATAAACGCATCTGCTAATCCTTGAACACCGATTCCCATTGGTCGATGACG 3537440 Query 37557 CTTATTAGATC-TAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTA 37615 ||| || | | || | |||| || ||||| ||| | | || || | ||| | | Sbjct 3537439 AAGATTCGAACGTTGA-GCTTCTGGTACAGGATAGTAAGTCACGTCGATAACTTTGTCCA 3537381 Query 37616 GATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CATAAATACGTTATT 37673 |||| | || | || ||| | |||| || || || || | || |||| || Sbjct 3537380 GATTACGAGTTACAACCTTGACAATGGATTTCAATTTTTCAAAATCAAAGATTCGTTTTT 3537321 Query 37674 ----ATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTT 37729 || |||||||||| |||| | || || |||||||||| || || |||||||||| Sbjct 3537320 TTGGATCAACAAATTTATTCAATGCGATTGAAGCTAGATTACAGACGGCTACTTCATCTT 3537261 Query 37730 CGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGC 37789 | ||| | ||| || ||||| ||||| || | ||||| || | ||| Sbjct 3537260 TAGATGAATATTCCACAATTTCGGTACAAAGATTCGAACATTTGATTGTACCGAGATTTT 3537201 Query 37790 TTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTA 37849 |||||| |||||| ||||||| |||||| || | || || || ||||| ||| | Sbjct 3537200 GTTGATTTGATTTTCGATTACAATGATCTTTGTAAACCATGTATGGTGTTCCAGTTTCGA 3537141 Query 37850 TTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAAC----GATCGCTTTAAtt 37905 |||| | || | ||||| ||| | | | || | ||||| | | || Sbjct 3537140 TTTGTGATTCAAGAATAGCAAACCAAAGAACACGAGCACGACATTGTGATCGATATCGTT 3537081 Query 37906 tttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCAT 37965 ||| | || ||| || || ||| | ||| | ||| || | ||||| ||| || Sbjct 3537080 TTT--CATT--TTCATAACCTTCATAAAGTTTTTCAAATTCTTCACCCCAACAATCAAAT 3537025 Query 37966 AATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCC 38025 || || |||||||| |||||||| | ||||| | |||||| |||||||||| | Sbjct 3537024 AACCCGGGACATTCATGCGGACACATCAATGACCACATTCCATCTTGATCTACGCGTTTC 3536965 Query 38026 ATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTC 38085 || ||||||||||| | ||||| ||| ||||||||| | | ||| || Sbjct 3536964 ATGAATAAATCAGGAATCCATAGAGCATAAAATAAATCACGTGCACGTAGTTCCTCCGAA 3536905 Query 38086 CCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAA 38145 || ||| || | | ||||||||||| || ||||||| ||||||||||| | ||| Sbjct 3536904 CCGGTATTTTTGCGAAGACTTAGAAAATCAAAGATATCAGAATGCCATGGTTCCAGATAG 3536845 Query 38146 ATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTA 38205 || | | |||||| || | ||| | ||| || |||| || ||||| | | || ||||| Sbjct 3536844 ATGGCAAATGCTCCAGGACGTTTGTTACCACCTTGATCAACATATCGAGCAGTATTATTG 3536785 Query 38206 TATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTA 38265 |||| | || |||||| | | |||||||| | || ||| |||||| |||||| || Sbjct 3536784 TATACGCGTAGCATAGGAATCAAGCCATTAGAGATTCCATTTGTACCGGCAATATAACTA 3536725 Query 38266 CCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAA 38325 || || ||| ||| | || | || || ||||| || |||||| || | Sbjct 3536724 CCAGAAGATCGGATACAATGAATATTAAGACCAATGCCACCAGCTGATTTTGAGATGATG 3536665 Query 38326 GCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATA 38385 || |||||||| | ||||||| |||||||||| || || ||||| | || | || | | Sbjct 3536664 GCACATTGTTTAAGCGTATCATATATACCTTCAATGCTATCATCACTCATAGTGAGCAGA 3536605 Query 38386 AAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGT 38445 ||||| || | ||| ||| | |||||||| || || || ||||| ||||||||| Sbjct 3536604 AAACATGATGATAATTGCGGCCGTTTTGTTCCGGCATTGAACAACGTAGGTGATGCATGT 3536545 Query 38446 ATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCG 38505 | ||||| |||||||| | ||||||||||||| || || |||| |||||| | | Sbjct 3536544 GTAAACCAATTTTCCGATATCAAATTATATGTTTCAATGGCAGCATCAATATCATCACGA 3536485 Query 38506 TGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTA 38559 |||||||| | || | ||| | |||||| || |||||||||| | |||| Sbjct 3536484 TGAATACCAATAGCACAACGCATCAACATATGCTGAGGTCTTTCTACAACTTTA 3536431 Score = 392 bits (434), Expect = 3e-104 Identities = 626/884 (71%), Gaps = 21/884 (2%) Strand=Plus/Minus Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 ||||||||||| ||| ||| ||| |||||||| | |||||||||| |||||| | Sbjct 930117 TTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTCTAATGATATTTGT 930058 Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458 |||||||| ||| ||||| | || | |||||||||| |||| || ||| Sbjct 930057 TCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACAATCTAATTCAACCAAT 929998 Query 11459 AATCTATCTGCGACGA-ATTCTATATACTGAGACATTAAACAACAATTCATACCTATAA- 11516 || | ||| || || | |||| ||||| | |||||||| | ||||||||| || | Sbjct 929997 AAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCATTCATACCGATCAA 929939 Query 11517 -GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATT 11575 ||| || || | ||| | || | ||| || | ||| |||||||| |||||||| || Sbjct 929938 TGAT--ACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACAGCATCAATAATA 929881 Query 11576 ATCGACGTTATAACTTCCTTA-GATGGTGGATG--TAATAA-ATGTTTAAACATTAAACA 11631 || | | | ||| || |||| |||| | || || ||| | ||||| | ||| Sbjct 929880 ATT----TCAACAATTCGTTGTGATGATGGACGATTACGAATATGATGAAACAAAAGACA 929825 Query 11632 CGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCC 11691 ||||||||||||||||| ||||| || | || | |||||| ||||| || | || Sbjct 929824 GGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAAGGTAAGACC 929765 Query 11692 GGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATAT 11751 ||||| | || |||||||||| |||||| || || ||||||||||| ||||| ||||| Sbjct 929764 AGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGAAAAAAATAT 929705 Query 11752 TCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT---ACCTTGTTG-CTAGATA 11807 ||| || ||||| |||||||| | || | ||| || || ||| | || | | Sbjct 929704 TCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCATCTTG-TG 929646 Query 11808 TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAA 11867 |||| | | ||||| | |||||| || | ||| || | | |||||| || | Sbjct 929645 TCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGTATAGCATTGA 929586 Query 11868 ATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTT 11927 ||| | || ||| || ||| |||||| |||| || ||||| |||||||| Sbjct 929585 ATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATAATGAATACATTT 929526 Query 11928 CTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACT 11987 ||||||||| |||||| ||||| |||||||||||||| ||||| ||||| |||| | Sbjct 929525 CTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTGCTTCTGGTATTT 929466 Query 11988 GTACATC-CACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCA 12046 ||||||| | |||||| | ||| |||||||| ||||| |||||||||||||| | ||| Sbjct 929465 GTACATCACGAATAAAA-CGTTCAGCTAAATTTTCATTAACAATACCATCACTTGCAGCA 929407 Query 12047 AAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCA 12106 ||||| || | || |||| || || | |||||| | | ||||||||| ||||| Sbjct 929406 AAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATTTATTCCAATGT 929347 Query 12107 TCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTA 12166 | | ||| | || ||||||||||||||| |||||||| ||| | | || ||| Sbjct 929346 ACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTTCAGCTTTTTTG 929287 Query 12167 TACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210 |||||| |||| ||||||||||| | ||| || || | ||| || Sbjct 929286 TACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAA 929243 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| || |||| ||||| | | || | |||||| | | |||||||||||| ||| Sbjct 3538262 TCAACCGTAAATTGTATAGCTTGCGCAGCTGGTTTTGTACGTAGATAATACATTCCGGTT 3538203 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATT- 36908 || | || | | ||| || |||||||||| |||| ||||| | || || || Sbjct 3538202 TTCAATCCTGAACGCCAACCAAAAAAATGCATTGATGTCAATTTTGTG-ATACTGGTTTC 3538144 Query 36909 ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCAT 36968 | | | || || | | ||||||||||||||| ||||| ||||| | || | ||||| Sbjct 3538143 AGCAAAATGAATGTTTAATGATTGACTTTGATCGATAAAGGCACCACGATCAACAGCCAT 3538084 Query 36969 TTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATA 37010 | | ||| ||| || | ||| |||||||| ||||| || Sbjct 3538083 CTGGACAATCGTTTTCTGTGGTATTTCCCAAACAGTTTTGTA 3538042 >seq569 Length=351751 Score = 509 bits (564), Expect = 2e-139 Identities = 1106/1635 (68%), Gaps = 29/1635 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| || |||| ||| | | || ||||| |||||||| | |||||||||||| ||| Sbjct 124930 TCAACAGTAAATTGTATGGCTTGTGCTGCCGGTTTTGTTCGAAGATAATACATTCCTGTT 124871 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 |||| || | ||| || ||||||||||| || | |||||| | | || | | Sbjct 124870 TTTAATCCATTACGCCAACCATAAAAATGCATTGATGTAATTTTTGCTTTAGATGGTTCA 124811 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | |||| || | | ||||||||||||||| ||||| ||||| | || ||||| Sbjct 124810 GCCATATGTACATTTAATGATTGACTTTGATCGATAAATGCACCACGATCAATAGCCATA 124751 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 || | |||||||||||| | ||| ||||| || |||||||||| | ||| |||| ||| Sbjct 124750 TCGATAATACATTTTTGTGGTATTTCCCATACTGTTTTATATAATGATTTGATATCATCC 124691 Query 37030 GGTA---AATCTAAATGTTGAATAGAACCATTATGTAACAC-AATTGTATTCTTTATGTC 37085 |||| |||| | || || || |||||| || || || ||| | ||| || | || Sbjct 124690 GGTATTGAATCAATATCCTGTATTGAACCACGAT-TAGCAATAATAGAATTTTTCAATTC 124632 Query 37086 ATTATTCCACATATTTCTACTTA-TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAA 37144 || |||||| | | | | ||| ||| ||| | | || ||| |||| |||| | || Sbjct 124631 ATCATTCCAAAG-TCCCAAATTAATTAAATCTTTAAGTAAATGTTGATTAACAATATCAA 124573 Query 37145 AATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCAT 37204 || || || | || | ||| ||||| ||||| ||||||||||||| || |||| Sbjct 124572 AACTACCGGACATAACACGTCTAGTATAGATATTTGATGTATATGGTTCAAATGATTCAT 124513 Query 37205 TATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTC 37264 |||||| | ||||| | || ||||| || ||||||||||| | | | ||||||| Sbjct 124512 TATTACCAAGAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAACCAATAAACTATTTC 124453 Query 37265 TCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-G 37323 | |||| | | |||| | | ||| | |||| ||||| ||| | ||| ||||| | Sbjct 124452 GAATACCATATTTGGAAATTTTTTCTTTCAATTCAGACCAATTCCAAAGATCGGTTGGTG 124393 Query 37324 TTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTC 37383 | | | ||||||||||||||||||||||||||| |||| || | | ||| || Sbjct 124392 TACGATT-CCACATATCATATTGTAGAATACCTTTTGATACTGGTGATCCTTGATAAGTT 124334 Query 37384 TCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATT 37443 ||||| || || || || |||| ||| ||||| | ||| | ||| ||||||| ||| Sbjct 124333 TCATATGGACCATATTGTTCTGCTAATTCACAACTTGCTTCCAATGCACCATAATAAATT 124274 Query 37444 GTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAAT 37503 ||||| || ||||| ||||| | | |||||||||| || || ||| ||| | ||| Sbjct 124273 GTTTCAAATATTTGGATATTCATTTTTTTTGCTTCCAAACTTTCATATGGATAACGTAAT 124214 Query 37504 AATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTA 37563 | | || |||| || ||||| || ||||| | || || |||| ||| ||| Sbjct 124213 AGACTGAATGCATCGGCTAAACCTTGTACACCAAGTCCAATAGGTCGATGACGTAAATTT 124154 Query 37564 GA---TCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTT 37620 || ||| | | || | |||||||||||| ||| || ||||| |||| |||| Sbjct 124153 GAAAGTCTTGTC---TCCGGTAATGGATAATAATTACCATCAATAATTTTGTTTAAATTT 124097 Query 37621 TTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAAT--AC---GTTATT-A 37674 || | || ||| |||| || | | || || | |||| || ||| || | Sbjct 124096 TTTGTCATTACTTTAACAATTTTTTTAAGTTTTTCATAATCAAATTGACCGAGTTTTTGA 124037 Query 37675 TTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTA 37734 | |||||| || ||||| ||| ||| ||||||||| || |||||||| | || | Sbjct 124036 TCAACAAAACGTGGTAATGAAATCGATGCTAAATTACATACGGCCACTTCATC-TGGTGA 123978 Query 37735 CTAA-ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTG 37793 || ||| | ||| |||||||| ||||| || ||||||| || | ||| ||| Sbjct 123977 TGAATATTCAACAATTTCTGTACAAAGATTTGAACATTTAATTGTACCAAGATTTTGTTG 123918 Query 37794 ATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTG 37853 ||| ||||| ||||||| |||||| |||| ||||| || || || ||| ||||| Sbjct 123917 ATTTGATTTACGATTACAATGATCTTTGTATAACATATATGGAGTACCGGTTTCAATTTG 123858 Query 37854 AGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAAC--GATCGCTTTAAtttttttC 37911 || || | || | |||||| |||||| || | | || ||| ||| Sbjct 123857 TGCATCTAATATTGCAAACCATAATTGATGTGCTTTTACCTGTTGCCTATAACGACCTTC 123798 Query 37912 TTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTC-CCCCATACATCGCATAATCC 37970 ||| |||| | |||||| ||||| |||| ||| ||||| ||| || || Sbjct 123797 --ACGTTCATATTTTTCATATAA-TTGTTCAAATTCTTCACCCCAACAATCATGTAGACC 123741 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 |||||||| |||||||||| ||||| | |||| |||| || |||| |||||| Sbjct 123740 AGGACATTCATTCGGACACATTAATGACCACATTGCATCCATTTCAACACGTTTCATAAA 123681 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 |||||| |||| |||||||||| |||| ||| | | ||||||| || Sbjct 123680 TAAATCCGGTATCCATAATGCATAGAATAGATCACGTGCACGTAATTCTTCCGAACCAGT 123621 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 ||||||| | || || ||| | |||||||| | ||||||||||||| ||| || | Sbjct 123620 ATTCTTTTTCAAATCTAAAAATGCAAATATATCTGAATGCCATGGTTCTAGATAGATAGC 123561 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | ||| ||||| | ||| |||| || |||| || ||| | |||| |||||| ||| Sbjct 123560 AAATGCACCTGGACGTTTTCCACCACCTTGATCAACATAACGTGCTGTATTATTAAATAC 123501 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | |||||| || || | ||||| || || || |||| | ||||| | || | Sbjct 123500 ACGTAACATTGGAACGAGTCCATTTGAAAAACCATTAGTACCAGCAATATATGATCCTTG 123441 Query 38271 AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCA 38330 | || ||| | || || || || ||||| ||| |||||| | | || || Sbjct 123440 TGAACGAATACAATGTACATTTAAACCAATACCACCAGCAGATTTTGAAACAATTGCACA 123381 Query 38331 TTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACA 38390 ||||||| |||||| |||| ||||| ||||| ||||| |||| || | ||||| Sbjct 123380 ACGTTTTAATGTATCATATATTCCTTCAATACTATCATCGGACATTGTTAACAGGAAACA 123321 Query 38391 ACTAGACATTTGAGG 38405 |||||||| || Sbjct 123320 GGATGACATTTGTGG 123306 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 38416 CCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATAT 38475 || || || |||||||| || ||||||||| | |||||| ||| |||| | |||||| Sbjct 123222 CCAGCATTGAATAATGTTGGTGATGCATGTGTAAACCATCCTTCAGACATAAGATTATAA 123163 Query 38476 GTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATA 38535 ||||| ||| | ||| |||||| | || ||||| | || || | ||| | |||| Sbjct 123162 GTTTCGATTGCCGAATCAATATCATCTTTATGTATACCAACAGCAACACGCATCAACATA 123103 Query 38536 TGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTT 38595 |||||||||| ||| | | ||| ||| ||| | || ||| | | |||||| Sbjct 123102 TGTTGTGGTCGTTCAACAACATTACCATTAATTTTCAATAAATATGCACGATACAATGTT 123043 Query 38596 TTTATTCCAAAATAACTATATGAATAATCTCTATCGTA 38633 || | ||||||||| || | |||||| | ||| || Sbjct 123042 TTGAAACCAAAATAATTAAAACGATAATCACGATCATA 123005 >seq1101 Length=1082900 Score = 100 bits (110), Expect = 3e-16 Identities = 428/669 (64%), Gaps = 12/669 (2%) Strand=Plus/Minus Query 37948 TTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCA 38007 |||||||| || ||| || || || ||| | |||||||| || ||| | Sbjct 175525 TTCCCCCAAACCTCGTGTAGACCGGGTGATTGGTGCGGACACATGAGGCTCCAGTAGCTG 175466 Query 38008 TCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTT 38066 |||| ||||| | || |||||| |||||||| | ||| ||||| ||| || ||||| Sbjct 175465 TCTTGGTCTACTCTTTTCATAAACAAATCAGGAATCCACAATGC-GTAGAACAAATCCCG 175407 Query 38067 GGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGC 38126 | | | |||||| | || ||| ||| ||| || || ||||| ||||| Sbjct 175406 AGCACGAGCTTCTTCATGTCCGTGATTTTTTTTTAGTTCTAAGAATTCGAAAATATCCAA 175347 Query 38127 GTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAAT 38186 |||||||| || | ||| | | | | || || | | |||| || || | | Sbjct 175346 ATGCCATGGCTCCAGATATACTGCAAAGCCGCCCTTTCGTCTTCCACCACCTTGGTCGAC 175287 Query 38187 ATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTT 38246 ||| | | || | ||| | | | | | |||||||| | ||| || | || || Sbjct 175286 ATAACGGGCGGTTTCATTGAAAACTTTGAGCATAGGTATAACACCGTTGCTAATACCATT 175227 Query 38247 TATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACC 38306 | |||| || | ||| || | || ||||| ||| ||| | | || | |||||| Sbjct 175226 TGTACCTTGAATTTCAGTCCCGTGTGCCCGTATTTTATGTATAGCTAGCCCAACTCCACC 175167 Query 38307 TGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTC 38366 ||| | ||| || | ||||||||||| ||||||| | | || || || || || Sbjct 175166 TGCGTATTTACTAATAATTGCGCATTGTTTCAACGTATTATAAATTCCGTCAAT--TG-A 175110 Query 38367 ATCC---TTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTT 38423 |||| | ||| | | | | |||| ||| ||||||||| || ||||| |||| || Sbjct 175109 ATCCGATTGCATTTGCAACAAATAACAGCTACTCATTTGAGGAAAGCGAGTTGCGGCATT 175050 Query 38424 AAATAATGTAGGAGATGCATGTATGAACCATTTTT--CCGACAAATAATTATATGTTTCT 38481 ||| | ||| |||| ||| || ||||| |||| | | || | |||| ||||| || Sbjct 175049 AAACAGTGTGGGAGTTGCGTGAATGAAGTATTTCTGGCTGAGTA--AATTGTATGTCTCA 174992 Query 38482 ATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGT 38541 || | | || | ||||| ||| || | || || | ||| | ||| | ||| Sbjct 174991 ATAATCTTGTCAAGGTCACCAATGTGGATTTGCACAGCAACTCGCATGAACATGTATTGA 174932 Query 38542 GGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATT 38601 ||| |||||| ||||| ||| ||| | | ||| |||||||| | ||| || | Sbjct 174931 GGTGTTTCTACAATTTTCTTACCAGATTTCAACAAATAAGATTTTTCCATTGTCTTGAAA 174872 Query 38602 CCAAAATAA 38610 ||||| ||| Sbjct 174871 CCAAAGTAA 174863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468517057627680