Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 9e-29
seq391 102 8e-17
>seq1
Length=3593316
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || ||||||||||| || || || | || || |||||||| || |||||||| |
Sbjct 1033027 CCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGAC 1033086
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | |||||||| |||||||||||| |||||| ||||||||||| || ||
Sbjct 1033087 AATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033146
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| |||||||| || |||||| ||| | | ||| | ||||| | || || ||
Sbjct 1033147 ATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACT 1033206
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || ||||| ||||| ||||||||||| |||||||||
Sbjct 1033207 TCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCATA 1033254
Score = 134 bits (148), Expect = 1e-26
Identities = 161/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA- 139608
||||| || || || | || || |||||||| |||||||||||| || ||| ||||
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGT--TCGAC 1031669
Query 139609 -GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 139667
||||| | ||||| || ||| |||||| ||| |||||||| || || || |||||||
Sbjct 1031670 CATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTT 1031729
Query 139668 TGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727
|||| ||||||| ||| | | ||| | || || | || ||||| || | ||| |
Sbjct 1031730 TGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGA 1031789
Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || |||||||| ||||||||||| ||||||||
Sbjct 1031790 TGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| |||| |||||| || || || | || || || |||||||| ||||||||| |
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| | |||||||||||| |||||| ||||||||||| || ||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||||||||| || ||| |||| | |||| | | ||| | ||||| | || || ||
Sbjct 1033375 ATGCCTTCTTTATC-TTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGAC 1033433
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || ||||| ||||||||||| ||||||||
Sbjct 1033434 TTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || ||||| ||||| || | |||| || || |||||||||||||| ||||| |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | ||||| |||||||| ||||| | |||| ||||||||| || || ||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||||||||| |||||| || | | ||| | || || | ||| |||||
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || || ||||| ||||| || || || ||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCATA 1032739
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| |||||| || || || | || ||||||||||| ||||| |||||
Sbjct 1032284 CCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGAT 1032343
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | ||||| | |||||||| ||| |||||| ||||||||| || || ||
Sbjct 1032344 AATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGA 1032403
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || ||||| || ||| |||||| || | | ||| | ||| || | || || ||
Sbjct 1032404 ATTCCCTCTTTATC-CTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAAC 1032462
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || || ||||| ||||| ||||| |||||||||
Sbjct 1032463 GTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCATA 1032511
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| ||||| || || | || || || ||||||||||| |||||| |
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | || || || ||| |||||| ||||||||||| || ||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || |||||||| |||||| ||||| | ||| | || || | ||||| ||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACT 1032235
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || ||||| | ||||| ||||| |||||||||
Sbjct 1032236 TCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCATA 1032283
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || ||||||||||| || |||||| | || | ||||| | |||||||||
Sbjct 1031858 GTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCCAATTGTTTACCA 1031917
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686
|| | |||| |||||||||||| || || || ||||| || || ||| | || | |||
Sbjct 1031918 GCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATC-TTGAATCTTGGCTTT 1031976
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
|| | ||| | ||| || | ||||| || || | || | ||| || || || | ||
Sbjct 1031977 TACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTTACCAGTTAGGGT 1032036
Query 139747 TTTTACGAATATTTGCATA 139765
|| ||||| |||||||||
Sbjct 1032037 CTTGACGAAAATTTGCATA 1032055
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || ||||| || || || | |||| ||||| |||||||||||||| |||||
Sbjct 1032740 CCACCACGTAATCGTAATACGAGATGAAGTGTAGATTCTTTTTGAATGTTGTAATCCGAT 1032799
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| | ||||||||| ||| | |||| |||||||||||| || ||
Sbjct 1032800 AGGGTGCGACCATCTTCCAACTGTTTACCTGCAAAAATCAAACGTTGCTGATCTGGTGGG 1032859
Query 139658 ATGCCT 139663
||||||
Sbjct 1032860 ATGCCT 1032865
>seq391
Length=841353
Score = 102 bits (112), Expect = 8e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| | ||| | ||||| ||||| || || ||||| || ||||| || |||
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| || || || ||||||||| | || || | ||||||||| || ||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG--TTCCACTGTGTCGGTGGGCTCCA 139715
|| ||||||||||| || ||||| ||| | || || | ||||| | || ||||
Sbjct 730946 ATTCCTTCTTTGTCTTGGA--TTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCA 731003
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| | ||| | |||| || || || ||||| ||||| || |||||
Sbjct 731004 CCTCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || ||||| || | || | || || || ||||||||||| ||||| |
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | ||| || || || || || |||||| | || | || || ||||| || ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCAC 139716
|| |||||||| || ||| |||| ||||| | || || | || ||| | ||||| ||
Sbjct 251054 ATCCCTTCTTTATC-CTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTAC 251112
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | | | | || || ||||| |||||||| || |||||||||
Sbjct 251113 TTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCATA 251161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496055802542400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |