Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 3e-21
seq391 111 1e-19
seq768 89.7 4e-13
>seq1
Length=3593316
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | ||| |||||||| | || |||||||| | ||||||||||||
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | | || |||||||| || |||||||| |||||||| || ||||| | ||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || ||||| || ||| |||| || | | | || || | ||||||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACT 1032235
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || |||||||| ||||| |||||||| || |||||||||||
Sbjct 1032236 TCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| |||| || |||||||| | || || ||||| | || |||||||||
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
||||| || | || ||||||||||| |||||||| ||||| ||||| ||||| | ||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||||||| || ||| ||||||| | | | || || | || ||
Sbjct 1031720 ATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACT 1031779
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || || ||||| ||||| | ||||| || ||||||||||||
Sbjct 1031780 TCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | ||||||||| | ||| || ||||| | ||||||||||||
Sbjct 1031828 CCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGAT 1031887
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| ||||| | || ||||||||||| || || |||||||| || || ||||| | ||
Sbjct 1031888 AAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGA 1031947
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || ||| |||| || | | | ||| || | ||||||
Sbjct 1031948 ATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACT 1032007
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || ||||| || ||||| || || || |||||||||||
Sbjct 1032008 TCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 95.1 bits (104), Expect = 9e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
|| |||||||| | ||| || ||||| | ||| ||||| |||||||| || | ||
Sbjct 1033042 AATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCATCT 1033101
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | |||||| || ||||| |||||||| || ||||| | || | ||||||||| ||
Sbjct 1033102 TCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTATCC 1033161
Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077
||| |||| || | | | ||||| | ||||| || | || || |||
Sbjct 1033162 TGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTAATGGTT 1033221
Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| || || | |||||| || |||||||||||
Sbjct 1033222 TTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | || |||||||| | || |||||||| | ||| |||||||||
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| ||||| | || ||||||||||| || ||||| |||||||| || ||||| | ||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || || |||| || | | | ||||| | |||||
Sbjct 1033375 ATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACT 1033434
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || ||||| || || | ||||| || || ||||||||
Sbjct 1033435 TCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
>seq391
Length=841353
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957
||||||| ||| | ||| |||||||| | |||||||| |||||||| || |||
Sbjct 250949 AACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCGCGAATCG 251008
Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017
|| | ||| || || |||||||| || ||||||||||| | ||| | |||||||| ||
Sbjct 251009 TCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCTTTATC- 251067
Query 43018 CTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076
||| || | ||| || || ||| || ||| | ||| || || | | ||| |
Sbjct 251068 CTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGAAATATT 251127
Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||||| || | |||||| ||||||||||||||
Sbjct 251128 TTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 89.7 bits (98), Expect = 4e-13
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978
|| || || | |||||| || ||||| || | || || || ||||| || ||||||
Sbjct 251198 TCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAA 251257
Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA----TCAACTCTTTGAC 43034
|| ||||||||||| || | ||| | |||||||| || |||| ||| ||||| ||
Sbjct 251258 ATTAATCGCTGTTGGTCTGGCGGAATCCCTTCTTTGTC-CTGAATTTTCA--TCTTT-AC 251313
Query 43035 TCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTT 43094
|| ||| |||||| | ||||| || | | |||| ||||||| |||| || ||
Sbjct 251314 ACTCTCAATAGTGTCGTTGGGTTCGACTTCCAAAGATATATTTTTTCCTGTTAAGGTCTT 251373
Query 43095 CACAAAAATTTGCAT 43109
||||||||||| ||
Sbjct 251374 TACAAAAATTTGTAT 251388
>seq768
Length=1243675
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 42878 CGTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAAT 42937
|| |||| |||||||| | | |||||| ||||| || ||||||||| | ||||| |
Sbjct 1130691 CGCCGCCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGT 1130750
Query 42938 CGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGG 42997
| | | || || |||| ||||| || || ||||||||||||| ||||| || || |
Sbjct 1130751 CCGCGAGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCG 1130810
Query 42998 CCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT 43057
||| | || || || || |||| ||||||| || | | |||||| | |
Sbjct 1130811 GCGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGT 1130870
Query 43058 CGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || || | || || | || || || || || ||||| || ||||||||
Sbjct 1130871 CCACCTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381363455420676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |