Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 7e-37
seq391 120 3e-22
>seq1
Length=3593316
Score = 168 bits (186), Expect = 7e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || ||||||||||| || ||||| | || |||||||||||||| || ||||| |
Sbjct 1033027 CCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGAC 1033086
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||||||||||||||||||| |||||| ||||||||||| || ||
Sbjct 1033087 AATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033146
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| |||||||| || ||||| ||| | | ||| | ||||||| ||||| |||
Sbjct 1033147 ATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACT 1033206
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || ||||| ||||| ||||||||||| |||||||||
Sbjct 1033207 TCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCATA 1033254
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || |||| |||||| || ||||| | ||| ||||| ||||| || || |||||| |
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | ||||||||||||| |||||| ||||||||||| || ||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
||||||||||| || |||||| ||| | | ||| | ||||||| ||||| |||
Sbjct 1033375 ATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACT 1033434
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | || || || ||||||||||||||||| ||||||||
Sbjct 1033435 TCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
Score = 152 bits (168), Expect = 5e-32
Identities = 165/217 (76%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA- 143028
||||| || ||||| | ||| ||||||||||| ||||| |||||| || ||| ||||
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGT--TCGAC 1031669
Query 143029 -GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087
||||| | |||||| || ||| |||||| ||| |||||||| || || || |||||||
Sbjct 1031670 CATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTT 1031729
Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147
|||| |||||| ||| | | ||| | || |||| ||||| ||||| | || |
Sbjct 1031730 TGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGA 1031789
Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || |||||||||||||||||||| ||||||||
Sbjct 1031790 TGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || ||||| ||||| || | ||||| ||| ||||||||||| ||||||||||| |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| || ||||| ||||| | |||| ||||||||| || || ||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||||| || | | ||| | || |||| |||||| |||
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | || || || ||||| ||||| || || || ||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCATA 1032739
Score = 123 bits (136), Expect = 3e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| ||||| ||||| | ||| ||||| ||||| |||||||||||| |
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| | ||| || || ||| |||||| ||||||||||| || ||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || |||||||| ||||| ||||| | ||| | ||| || | || || |||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACT 1032235
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | || || ||||| | ||||| ||||| |||||||||
Sbjct 1032236 TCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCATA 1032283
Score = 123 bits (136), Expect = 3e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || |||| |||||| || ||||| | || || |||||||| |||||||||||
Sbjct 1032284 CCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGAT 1032343
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||||| | ||||||||| ||| |||||| ||||||||| || || ||
Sbjct 1032344 AATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGA 1032403
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || ||||| || ||||||| || | | ||| | || || | ||||| ||
Sbjct 1032404 ATTCCCTCTTTATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACG 1032463
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | || || || ||||||||||| ||||| |||||||||
Sbjct 1032464 TCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCATA 1032511
Score = 120 bits (132), Expect = 3e-22
Identities = 414/640 (65%), Gaps = 12/640 (2%)
Strand=Plus/Plus
Query 50226 TTTTTACACATTTCAAGCGGCCATGGAAAATGTTCACACACAAATGTACGGAACGTTAAT 50285
|||||| ||||||| || || ||||||||||| || ||||||| | || ||
Sbjct 929485 TTTTTATGGATTTCAAATTGCTATCGAAAATGTTCATTCAGAAATGTATTCATTATTGAT 929544
Query 50286 TATTACATTGATTCCGGACAAAAAGCAACAAGACTTAATACTCAACGCTTTCGATAATAT 50345
|| ||| | | |||| || ||||||| || || |||| ||| | |||| |
Sbjct 929545 TAATACCTATGTATCGGATCGTAATGAACAAGATTTTCTATTCAATGCTATACGTAATCT 929604
Query 50346 TTCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGACTaaaaacaaaaaaCTTAC 50405
| ||||| ||||| | | ||||| | ||||| || | | ||||
Sbjct 929605 ACCTTGTGTAGAGAAAAAAGCTAAATGGGCTATACGTTGGACACAAGATGATTCGGTTAC 929664
Query 50406 TTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTT 50465
|| |||||||||||| | || ||||| |||||||| | |||||||||||| ||
Sbjct 929665 ATTTGCCGAACGTTTAATTGCATTTGCTGCTGTTGAAGGAATATTTTTTTCCGGTTCATT 929724
Query 50466 TGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGA 50525
|||||| || |||| | |||| ||| ||||||| || || || ||| || ||
Sbjct 929725 TGCAGCAATTTTTTGGCTAAAAAAACGTGGCCTAATGCCTGGTCTTACCTTTTCAAATGA 929784
Query 50526 GTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGT-TTGTACTACAATACGC 50584
|||||||| || || |||||| | || || ||||| ||| || | | || |
Sbjct 929785 ATTGATTTCACGTGATGAAGGATTACATTGTGATTTTGCCTGTCTTTTGTTTCATCATAT 929844
Query 50585 GCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACA 50644
||||| | ||||| || |||| | || || | | || || || | |
Sbjct 929845 TCGTAATCG----TCCATCATCACAACGAATTGTTGAAATTATTATTGATGCTGTTAATA 929900
Query 50645 TCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACA 50704
| ||| |||| ||| | || || || ||||| || ||||| | || ||||| || |
Sbjct 929901 TTGAACAAGAATTTCTTACCGATGCATTACCAGTATCATTGATCGGTATGAATGCTAAAT 929960
Query 50705 TGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTT-GTTGCAGCTG--GGACAAC 50761
| |||| ||| || ||||| | | ||| || | || || |||| | | | ||
Sbjct 929961 TAATGTCCGATTATATTGAATATTGTGCCGATCGTTTATTGGTTGAATTAGATTGTGAA- 930019
Query 50762 CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCA 50821
||| | ||||| || || || ||| |||||| | | ||||| || || || |
Sbjct 930020 --AAACATTATAAAACAACAAATCCATTTGATTTTATGGAACAAATATCATTAGAAGGTA 930077
Query 50822 AAACAAACTTTTTCGAAAGACGTGTAGGCGAATA-CAAAA 50860
|| |||| ||||| |||| |||||| | |||||| |||||
Sbjct 930078 AATCAAATTTTTTTGAAAAACGTGTTGCCGAATATCAAAA 930117
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | || ||||| | || ||||||||||| || |||||||||
Sbjct 1031828 CCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGAT 1031887
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| | |||||||||||| | |||| |||||||||||| || ||
Sbjct 1031888 AAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGA 1031947
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| || || ||| || ||||| | ||| | || |||| || || |||
Sbjct 1031948 ATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACT 1032007
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | ||| || || || | || || ||||| |||||||||
Sbjct 1032008 TCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCATA 1032055
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || ||||| || || || | ||||| ||||||||||||||| |||||||||||
Sbjct 1032740 CCACCACGTAATCGTAATACGAGATGAAGTGTAGATTCTTTTTGAATGTTGTAATCCGAT 1032799
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| ||||| | |||||||| ||| | |||| |||||||||||| || ||
Sbjct 1032800 AGGGTGCGACCATCTTCCAACTGTTTACCTGCAAAAATCAAACGTTGCTGATCTGGTGGG 1032859
Query 143078 ATGCCT 143083
||||||
Sbjct 1032860 ATGCCT 1032865
>seq391
Length=841353
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| | ||| | |||||||||||||| |||||||| || |||||||| |||
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| ||| || ||||| ||||||||| | || || | ||||||||| || ||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG--TTCCACCGTGTCCGTGGGTTCTA 143135
|| ||||||||||| | ||||| ||| | || || | ||||| | ||||| |
Sbjct 730946 ATTCCTTCTTTGTC--TTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCA 731003
Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
| || | || | |||| || || |||||||| ||||| || |||||
Sbjct 731004 CCTCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 113 bits (124), Expect = 5e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| || ||||| || | ||| | || ||||| ||||| ||||||||||| |
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| | ||| || || ||||| || |||||| | || | || || ||||| || ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTA-GCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| |||||||| || |||||| ||| | ||| ||| | || || | || |||||
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCT-TTCAATGGTATCGTTTGGCTCTAC 251112
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||| | || | | || || ||||| |||||||| || |||||||||
Sbjct 251113 TTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCATA 251161
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||||| | || | ||||| || | || |||||||| || || ||||| || |
Sbjct 251390 CCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTGAC 251449
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || || ||||| | |||||| |||||| | || | ||||| ||||| || ||
Sbjct 251450 AAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGGA 251509
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| || || |||||| ||| | | ||| | ||||| |||||||||||
Sbjct 251510 ATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTACC 251569
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|||| | | | || || || ||||||||||| ||||| |||||| ||
Sbjct 251570 TCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCATACCT 251620
Score = 82.4 bits (90), Expect = 8e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
||||| || | ||| |||||||| || || ||||| || || || || || |||||
Sbjct 251180 ACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTCT 251239
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
| ||||| |||||| | || | || || || || || || || ||||||||||| |
Sbjct 251240 AACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGAATCCCTTCTTTGTCCTGA 251299
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
||||| |||| || | ||||| ||||||| ||||| | || | | ||
Sbjct 251300 ATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGACTTCCAAAGATATATTTTTT 251359
Query 143156 CCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|| || || || ||||| || ||||| ||| ||
Sbjct 251360 CCTGTTAAGGTCTTTACAAAAATTTGTATACCT 251392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507006021587040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |