Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 7e-35
seq391 118 8e-22
>seq1
Length=3593316
Score = 161 bits (178), Expect = 7e-35
Identities = 175/230 (76%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| | |||| || || | |||||| || || |||||||| |||||||||||
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCG-- 1032569
Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| ||| ||| | ||||| | |||||||||||| | ||||||||||| ||||| ||
Sbjct 1032570 ACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTG 1032629
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||||||||||||||| ||||| ||| ||| |||| |||||||| ||| |
Sbjct 1032630 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCA 1032689
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
| || || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct 1032690 CTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCATA 1032739
Score = 136 bits (150), Expect = 3e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || ||||| | || || |||||||| ||||||||||| || | | | |||
Sbjct 1032299 AATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCT 1032358
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
||||||||||| || || | ||||||||||| ||||| ||||||||| ||||| ||
Sbjct 1032359 TCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCC 1032418
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
|||||| ||| ||| |||| || ||||| ||| || ||||| || ||||||
Sbjct 1032419 TGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTT 1032478
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| |||| ||||| || ||||||||||||
Sbjct 1032479 TTACCAGTCAATGTTTTCACGAAAATTTGCATA 1032511
Score = 131 bits (144), Expect = 1e-25
Identities = 163/216 (75%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGT 15209
|| || ||||| | || || |||||||| ||||| |||||| | ||| ||| | |
Sbjct 1031615 AATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGG--ACAATGTTCGACCAT 1031672
Query 15210 CTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGT 15269
|||| |||||||| || || | |||||||| || || || |||||| ||||||||||
Sbjct 1031673 CTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTGT 1031732
Query 15270 C-ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAAT 15327
| | ||||||| || ||| |||| || ||||| | || ||| || || ||||| ||
Sbjct 1031733 CTTGGATTTTTGCT-TTGACATTTTCGATAGTATC-CGATGGTTCCACTTCCAAGGTGAT 1031790
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||||||| |||| |||||||| |||||||||||
Sbjct 1031791 GGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 129 bits (142), Expect = 4e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210
|||||| ||||| | || || || ||||| |||||||||||| | | |||| | ||
Sbjct 1032070 TAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATC 1032129
Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270
||| ||||| || || || | ||||| ||||| || || |||||||| ||||||||
Sbjct 1032130 TTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTC 1032189
Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
|||||| |||||| |||| || ||||| || || || || ||||| ||
Sbjct 1032190 CTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGT 1032249
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||||| || |||||||| || ||||||||||||
Sbjct 1032250 TTTACCGGTAAGAGTTTTGACGAAAATTTGCATA 1032283
Score = 129 bits (142), Expect = 4e-25
Identities = 163/217 (75%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGT 15209
|| || ||||| | |||||| ||||||||||| || ||||| | ||| ||| | |
Sbjct 1033042 AATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCG--ACAATGTTCGGCCAT 1033099
Query 15210 CTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGT 15269
|||| | |||||| ||||| | ||||| ||||| || || |||||| |||||||| |
Sbjct 1033100 CTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTAT 1033159
Query 15270 CACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATT-TTCTACATCTAAGGTAAT 15327
| ||||| ||| || ||| |||| || || || | || ||| || || || |||||
Sbjct 1033160 CCTGGATTTTAGCT-TTCACATTTTCGATAGTGTC-CGATGGTTCGACTTCCAAAGTAAT 1033217
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||||| || |||| ||||||||| ||||||||||||
Sbjct 1033218 GGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCATA 1033254
Score = 125 bits (138), Expect = 5e-24
Identities = 156/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||| | |||||| |||||||| || ||||||||| || | | | |||||
Sbjct 1031846 ACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCC 1031905
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
|||||||| |||||| | ||||||||||| || || |||||| ||||| || || |
Sbjct 1031906 AATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGA 1031965
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGTTTT 15333
|| ||| |||||| |||| || ||||| | || || || || || || || |||||
Sbjct 1031966 ATCTTGGCTTTTACATTTTCGATTGTATC-CGATGGCTCGACTTCCAAAGTGATCGTTTT 1032024
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||| || || || || || ||||||||||||
Sbjct 1032025 ACCAGTTAGGGTCTTGACGAAAATTTGCATA 1032055
Score = 118 bits (130), Expect = 8e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || ||||| | || || || ||||| || || |||||| | | | | | |||
Sbjct 1033270 AATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCT 1033329
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| |||||||| ||||| | ||||| ||||| || || |||||| |||||||| ||
Sbjct 1033330 TCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCT 1033389
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATT-TTCTACATCTAAGGTAATGGT 15330
||||||| || ||| |||| ||||| || | || ||| || || || || |||||
Sbjct 1033390 TGAATTTTGGCTTTAACATTTTCGATGGTGTC-CGATGGTTCGACTTCCAAAGTGATGGT 1033448
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369
|||||| |||| |||||||| || |||||||| ||||
Sbjct 1033449 TTTACCAGTCAATGTTTTTACGAAGATTTGCATGATTGA 1033487
>seq391
Length=841353
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | || | ||||| || | ||||| ||||| || || ||||| ||
Sbjct 251162 CCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGAC 251221
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | |||||||| ||||| ||||| | || || || |||||||| |||
Sbjct 251222 AAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGA 251281
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||||||||| |||||| |||||||| | || || || ||| | ||| ||
Sbjct 251282 ATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGACT 251341
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || | || |||| ||||| | || |||||||||||||| |||
Sbjct 251342 TCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTATA 251389
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||||||| | || || | ||| | || || || ||||| ||||||||||| |
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATC--TG 250991
Query 15197 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| ||| |||| || || | ||| || ||||| | || || || ||||| || |
Sbjct 250992 ACAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCG 251051
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||| |||||||| || |||||| | || || |||| ||||||||| | ||||
Sbjct 251052 GAATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTA 251111
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
| || | | ||| |||| ||||||| ||||||||||||||||||||||
Sbjct 251112 CTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCATA 251161
Score = 111 bits (122), Expect = 1e-19
Identities = 165/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 15131 TGTCTGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAA 15190
||| | || ||||| | | || ||||| || | || || ||||| || || |||||
Sbjct 251384 TGTATACCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAG 251443
Query 15191 TCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCG 15250
|| | | |||| | |||||||||||||| ||||| | || || |||||||| ||
Sbjct 251444 TCTGACAAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCA 251503
Query 15251 TTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTT 15310
||||||||||| || || |||||| | || ||| |||| || || || | |
Sbjct 251504 GGCGGAATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGT 251563
Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| || | | ||| |||||||||| | ||||||||||| || ||||||
Sbjct 251564 TCTACCTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCATA 251617
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|||||||||| ||||| ||||| || |||||||| ||| || | | | ||| |||
Sbjct 730844 ACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTTGTCGTCT 730903
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| ||| || ||||| | || | | ||| || || |||||||||||||||||
Sbjct 730904 AGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCTTTGTCTTGG 730963
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|||||| | || | || || || || | ||| || || | ||||||| | ||
Sbjct 730964 ATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAATGTTCTTC 731023
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| | ||||| || ||||| |||||
Sbjct 731024 CCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362173364614002
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |