Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 3e-26
seq391 131 1e-25
seq768 95.1 8e-15
>seq1
Length=3593316
Score = 132 bits (146), Expect = 3e-26
Identities = 163/219 (74%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
|| || ||||||||||||||||| || ||||| || |||||||| |||||| | |
Sbjct 1032068 CGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCA 1032127
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||||||||| ||| || || |||||||| || | ||| || || |||||
Sbjct 1032128 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTG 1032187
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTC-GTTGGGTTGAACGTCCAGAGT 33330
|| | | | || |||||| ||| ||||| || | ||| | | || |||| ||
Sbjct 1032188 TCCTGGATTTTGGC---TTTTACATTTTCGATCGTATCAGATGGCTCG-ACTTCCAATGT 1032243
Query 33331 TATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || ||||||||||| ||||||||||||||
Sbjct 1032244 AATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 131 bits (144), Expect = 1e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
|||||| | || ||||| |||||||||||||| || || ||||| ||||| ||||| ||
Sbjct 1033254 ACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGA 1033313
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|||| | | || |||||||| || ||| ||| || || |||||||| || | ||
Sbjct 1033314 CAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGG 1033373
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
||||||||||| || ||| ||| || ||| || ||||| |||| ||
Sbjct 1033374 AATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGAC 1033433
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373
|||| ||| || ||||| || || | ||||||||||| ||||||||| ||
Sbjct 1033434 TTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATGATT 1033485
Score = 114 bits (126), Expect = 8e-21
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| || | ||| ||||| |||||||| || || || |||||||||||||| ||||| |||
Sbjct 1033027 CCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGAC 1033086
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
|| | | || || | ||| || ||| ||| || || |||||||| || | ||
Sbjct 1033087 AATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033146
Query 33263 ATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGA 33319
|| |||||||| || | | | || ||| || ||| || ||||| ||||
Sbjct 1033147 ATACCTTCTTTATCCTGGATTTTAGC---TTTCACATTTTCGATAGTGTCCGATGGTTCG 1033203
Query 33320 ACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| ||| || ||||| || || | |||||||||||||||||||||
Sbjct 1033204 ACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 107 bits (118), Expect = 1e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219
||||||||| || || || |||||||| ||||||||||| || || | | || ||
Sbjct 1031845 CACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTC 1031904
Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279
|||||| || ||| || || ||||||||||| || | || || ||||| || ||
Sbjct 1031905 CAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTG 1031964
Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGT-CGTTGGGTTGAACGTCCAGAGTTATCGTTT 33338
|||| |||||| ||| || || | || ||| | | || |||| ||| |||||||
Sbjct 1031965 AATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCG-ACTTCCAAAGTGATCGTTT 1032023
Query 33339 TTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| || || || || || ||||||||||||||
Sbjct 1032024 TACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 105 bits (116), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| |||||||| |||||||| |||||||| || || ||||| ||||| | |
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCA 1031671
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||| ||||| ||| || ||||| ||||| || | || || ||||||||
Sbjct 1031672 TCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTG 1031731
Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | || ||| || ||| || || || |||| || |||| ||
Sbjct 1031732 TCTTGGATTTTTGC---TTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTG 1031788
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || | ||||||||||||||||||||
Sbjct 1031789 ATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 102 bits (112), Expect = 5e-17
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| || | || ||||| ||||||||||| || ||||||||||| || |||||||| ||
Sbjct 1032283 ACCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGA 1032342
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| | | || || ||||| || || ||| || |||||||||||||| | ||
Sbjct 1032343 TAATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGG 1032402
Query 33262 TATGCCTTCTTTTTCGCTAA---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| || ||||| || || | ||| || || ||| || || || ||||
Sbjct 1032403 AATTCCCTCTTTATCCTGAATTTTTGCC---TTCACATTTTCGATTGTATCAGATGGTTC 1032459
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|||||| | || || ||||| || || | ||||| ||||||||||||||
Sbjct 1032460 AACGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 95.1 bits (104), Expect = 8e-15
Identities = 164/234 (70%), Gaps = 12/234 (5%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| || | ||| ||||| || | ||| | |||||| |||||||| || |||||||| ||
Sbjct 1032511 ACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGA 1032570
Query 33202 CAAATTGAGTTGGTCATC--CAAT-TGCTTTCCACTAAATATTAAACGTTGCTGGTCCGT 33258
||| | | || |||| ||| || || ||| || || |||||||||||||| |
Sbjct 1032571 CAATGT---TCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGG 1032627
Query 33259 GGGTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGG 33315
|| || |||||||| || | | | ||| || || ||| ||| || || |||
Sbjct 1032628 TGGAATTCCTTCTTTGTCTTGGATTTTAGCC---TTGACATTTTCAATGGTATCCGAGGG 1032684
Query 33316 TTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || |||| || || ||||| || || | |||||| || ||||| |||||
Sbjct 1032685 TTCCACTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
>seq391
Length=841353
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
|| ||||| ||||||||||||| |||||| || || || ||||| || |||||||| |||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
|| | | || || | |||||||||| ||| ||||| || || || || | ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
|| |||||||| || ||| | ||| || ||| ||| || ||||| || | ||
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACT 251113
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||| || ||||||| || | ||||||||| |||||||||||
Sbjct 251114 TCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| | || | ||| || || ||||| || ||||| || |||||||| || ||
Sbjct 251161 ACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGA 251220
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|||| | || || || || |||||| ||| ||||| || || ||||| | ||
Sbjct 251221 CAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGG 251280
Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321
|| |||||||| || ||| | ||||| | | ||| ||||||||||||| ||
Sbjct 251281 AATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGAC 251340
Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|||| || ||| ||||||| || | || ||||| |||||||| ||
Sbjct 251341 TTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
>seq768
Length=1243675
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202
||||| | | ||||| |||||| || | |||||||| ||||| || ||||| || |
Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755
Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262
| || | ||||||||| ||||| || ||| || | ||| |||||||||| ||
Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815
Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322
||||| || || || ||| ||| || | | ||||||||||| || | ||
Sbjct 1130816 ATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACC 1130875
Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || | || ||||| || || || ||||| ||||||||
Sbjct 1130876 TCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318772463895156
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