Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq391 104 2e-17
>seq1
Length=3593316
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| |||||||||| || |||||||| || ||||||||| ||| || ||||
Sbjct 1031615 AATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCATCT 1031674
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|||||||||||||| ||||| ||||| || ||||| || | || | ||||||||| |||
Sbjct 1031675 TCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTGTCT 1031734
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|||||| |||||| | | | |||||| | || ||||| || | || || |||
Sbjct 1031735 TGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGATGGTT 1031794
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||||||| || || || || || ||||||||
Sbjct 1031795 TTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 127 bits (140), Expect = 1e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971
||||||||||| ||| |||||||||||||| |||||| ||| ||| |||| ||
Sbjct 1031845 CACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTC 1031904
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
||||||||| || || || ||||| |||||||| || | || | |||||| ||||||
Sbjct 1031905 CAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTG 1031964
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
||| || ||| || | | | ||||| | ||||| || || | || || |||||
Sbjct 1031965 AATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTT 1032024
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||| |||| ||||| || || ||||||||
Sbjct 1032025 ACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| |||||||| | || || |||||||||||||||||| || ||| ||||
Sbjct 1033270 AATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCT 1033329
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
||||||||||| || ||||| ||||| |||||||| || | || | ||||||||||||
Sbjct 1033330 TCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCT 1033389
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
|||||| ||| || | | | || || | || || || || | || || |||
Sbjct 1033390 TGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATGGTT 1033449
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
||||| || || || || || || |||||||||
Sbjct 1033450 TTACCAGTCAATGTTTTTACGAAGATTTGCATG 1033482
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| |||||||| | || ||||||||| || || ||||| |||| ||| ||||
Sbjct 1032299 AATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCT 1032358
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|| |||||||| || ||||| ||||| ||||||||||| | || | || ||||||||
Sbjct 1032359 TCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCC 1032418
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||||||| || || | | | ||||| | || || || || | || || |||
Sbjct 1032419 TGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTT 1032478
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||| || || || ||||| || ||||||||
Sbjct 1032479 TTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|| |||||||||| ||| |||||||| ||||||||||| ||| || ||||
Sbjct 1033042 AATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCATCT 1033101
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
|| | |||||| || ||||| ||||| |||||||| || | || | ||||||||||||
Sbjct 1033102 TCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTATCC 1033161
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||||| ||| || | | | ||| || | || || || || | ||||| |||
Sbjct 1033162 TGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTAATGGTT 1033221
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || ||||| || || || ||||||||
Sbjct 1033222 TTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
||||||||||| || ||||| ||| || |||| || | ||||| || || ||
Sbjct 1032548 TCTTTTTGAATGTTGTAATCCGACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAA 1032607
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
||||| ||||||||||| | || | |||||||| ||| ||||| ||||| |
Sbjct 1032608 ATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTT 1032667
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| ||||| | || ||||| || | ||||| |||||||| || ||||| || |||
Sbjct 1032668 TCAATGGTATCCGAGGGTTCCACTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACA 1032727
Query 44111 AATATTTGCAT 44121
|| || |||||
Sbjct 1032728 AAAATCTGCAT 1032738
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| | || || |||||||| || |||||| || | ||||
Sbjct 1032070 TAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATC 1032129
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||| ||||| ||||| ||||| |||||||| || | || | || ||||| ||
Sbjct 1032130 TTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTC 1032189
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
||||| ||| || | | | ||||| | ||||| || || | ||||| ||
Sbjct 1032190 CTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGT 1032249
Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||||||| | ||| || || || ||||||||
Sbjct 1032250 TTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
>seq391
Length=841353
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||||||| | ||||||| ||| | || || |||||||| || |||||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
||| ||| |||||| | ||| ||||| ||||| || ||||| || || || | ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| ||||||||||| |||||| ||| || | ||| ||||| ||||| ||
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACT 251113
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||| | ||| |||| || || ||||| || ||||| ||||||||
Sbjct 251114 TCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||||||||| | | || ||| || |||| ||| ||||| || ||||| || ||
Sbjct 251389 ACCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTGA 251448
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | ||| || ||||||||||| ||||| || || ||||| || || | ||
Sbjct 251449 CAAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGG 251508
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||| ||||| |||||| ||| || | ||| || || | || || ||
Sbjct 251509 AATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTAC 251568
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || ||| ||||||| ||||| || || |||||||| |||||
Sbjct 251569 CTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354771883867656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |