Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 8e-29
seq391 105 6e-18
>seq1
Length=3593316
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038
||||| || || | | ||| |||||||||| ||| ||||||||||| ||||| ||||||
Sbjct 1031597 TTTCCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCG 1031656
Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098
|| ||| | ||||||||||||||| || ||| | || | | ||| |||||
Sbjct 1031657 GACAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGT 1031716
Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158
|| | ||||||||||| |||||| ||| || | | | || ||| ||||||
Sbjct 1031717 GGAATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCC 1031776
Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
||||| ||| |||||||| |||||||| ||||| || ||||||||||||
Sbjct 1031777 ACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| || ||||| | ||| |||||||||| || |||||||||||||| || |||||
Sbjct 1033025 TTCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCG 1033084
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
|| ||| |||||| | |||||| || ||| | || | | || ||||| |
Sbjct 1033085 ACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTG 1033144
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||||| || ||||| |||||| | | | || || |||||
Sbjct 1033145 GAATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGA 1033204
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| |||||||||||||| ||||| ||||| || |||||||||||
Sbjct 1033205 CTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || ||||| | ||| || | ||| ||||| ||||||||||| ||||||||||| |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| |||||| | |||||||| || |||| | | || || || ||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||||| ||||| || || | ||| | ||| |||||| |
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| ||||||||||| || ||||| |||||||||||||| |||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
|| |||||||| | ||| ||||| ||||| |||||||||||| || |||| | ||||
Sbjct 1032071 AAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCT 1032130
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
|||||||| || || ||| | || | | || ||||| ||| | || ||||||||
Sbjct 1032131 TCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTCC 1032190
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
||||| ||| || | | | | ||| || || ||||| ||||| |||
Sbjct 1032191 TGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTT 1032250
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|| ||||| | |||||||| |||||||||||
Sbjct 1032251 TTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| || |||| | ||| |||||||| | ||| ||||| ||||| || || |||||| |
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| ||| | ||||||||||||||| || ||| | || | | || ||||| ||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||||||| || |||||| ||| || | | | | || ||||| |
Sbjct 1033375 ATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACT 1033434
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || |||||||| || ||||| ||||| || || ||||||||
Sbjct 1033435 TCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
>seq391
Length=841353
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040
|||||||| |||| |||||||| ||| | || ||||| ||||| |||||||||||
Sbjct 250933 TCCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGA 250992
Query 20041 CATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGG 20100
|| || ||||| || | ||| || || ||| |||| | || ||||||||| ||
Sbjct 250993 CAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGG 251052
Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160
| |||||||| || |||||| |||||| ||| | |||| || ||
Sbjct 251053 AATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTAC 251112
Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | | ||| |||| || ||||| ||||| ||||||||||||||
Sbjct 251113 TTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058
||| || |||| ||| |||||||| || || ||||| || || |||| ||||||||||
Sbjct 251179 CACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTC 251238
Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118
|| ||||| || ||| |||| | | |||||| || || | |||||||||||
Sbjct 251239 TAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCGGAATCCCTTCTTTGTCCTG 251298
Query 20119 AATTTT--TTGTTTCAC-CTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175
|||||| | || ||| || ||| || ||| ||||| ||||| | || |
Sbjct 251299 AATTTTCATCTTTACACTCT---CAATAGTGTCGTTGGGTTCGACTTCCAAAGATATATT 251355
Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| || || || || || ||||||||||| ||
Sbjct 251356 TTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419580439663482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |