Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 6e-18
seq391 91.5 1e-13
>seq1
Length=3593316
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || || | || || | ||||||||| || ||||||||||||||||| |
Sbjct 1032511 ACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGA 1032570
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|||| ||| | || || ||||| || || || |||| ||||| ||||| || ||
Sbjct 1032571 CAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGG 1032630
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||| ||||| ||||| ||||| | | |||||||| | | |||
Sbjct 1032631 AATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCAC 1032690
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | ||| ||||||||||| || | |||||| ||||||||||||||
Sbjct 1032691 TTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
>seq391
Length=841353
Score = 91.5 bits (100), Expect = 1e-13
Identities = 166/237 (70%), Gaps = 12/237 (5%)
Strand=Plus/Plus
Query 48496 AAAACCTCCGCGCAACCTTAACACTAAATG--AAGTGTGCTCTCCTTTTGAATGTTGTAA 48553
||| ||||| | ||||| ||||| | ||| |||| || | ||||||||||||||||||
Sbjct 250930 AAATCCTCCTCTCAACCGCAACACCAGATGCAAAGT-TGAT-TCCTTTTGAATGTTGTAA 250987
Query 48554 TCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCC 48613
|| | |||| ||| || || || ||||| || | ||||||| ||||| |||||
Sbjct 250988 TCTGACAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCA 251047
Query 48614 ACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCT----ATGGTATCGGT 48669
||| | | ||| || ||| ||||||| | | | ||||| ||||||||| |
Sbjct 251048 GGCGGAATCCCTTCTTTATCCTGAATTTTC-GTT---TTCACGCTTTCAATGGTATCGTT 251103
Query 48670 AGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||| |||| | || |||| || || | |||||| |||||||| |||||
Sbjct 251104 TGGCTCTACTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421244412853322
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |