Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 2e-29
seq391 120 3e-22
>seq1
Length=3593316
Score = 143 bits (158), Expect = 2e-29
Identities = 183/251 (73%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820
|||||| ||| ||| || || || | | ||||| ||||| ||||| || |||||||
Sbjct 1033235 TTTTTACGAAAATTTGCATACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCT 1033294
Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880
|||| | ||||||||| || ||| ||| |||| ||||| || ||||||| |
Sbjct 1033295 TTTGAATATTATAATCGGACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCA 1033354
Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940
||| |||||||||||| ||||| |||||||| || | |||||| || || || |||
Sbjct 1033355 ATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGA 1033414
Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000
||||| | | ||||| || | ||||||||||| ||||| | ||||| || ||||
Sbjct 1033415 TGGTGTCCGATGGTTCGACTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGA 1033474
Query 95001 TCTGCATGCTT 95011
| |||||| ||
Sbjct 1033475 TTTGCATGATT 1033485
Score = 140 bits (154), Expect = 3e-28
Identities = 163/218 (75%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|||||| ||||| || || || ||||| ||||| | |||||||||| || |||| ||
Sbjct 1031611 TCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAA--TGTTCGA 1031668
Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909
||| |||| ||||||||| ||||||| || | ||||||||||| ||||||||||||
Sbjct 1031669 CCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCT 1031728
Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969
||||| | |||||||| ||||| ||| ||| || | | || || || | |||
Sbjct 1031729 TTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTG 1031788
Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||||| || || | ||||| || || || |||||
Sbjct 1031789 ATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 136 bits (150), Expect = 4e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|| || ||||| ||||| || ||||||||||| | ||| |||||| || ||| | |
Sbjct 1032068 CGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCA 1032127
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| || |||||| ||||||| |||| |||||||||||| ||||| || ||||||
Sbjct 1032128 TCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTG 1032187
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||| || || || ||| || |||| | ||||| || | || ||
Sbjct 1032188 TCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATA 1032247
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || ||||||||||| || || || |||||
Sbjct 1032248 GTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 136 bits (150), Expect = 4e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||| || | || ||||| ||||| || || || ||||| ||||| |
Sbjct 1033014 AAAAATTTGCATTCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTAT 1033073
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||||| || || | ||| || || ||||| || ||||||| |||| |||
Sbjct 1033074 ATTATAATCCGACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTG 1033133
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||||||| |||||||||||||| || | ||||| || || || ||| ||||||
Sbjct 1033134 CTGATCTGGTGGAATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTC 1033193
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | ||||| || | || |||||||| ||||| | |||||| || || || |||||
Sbjct 1033194 CGATGGTTCGACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 129 bits (142), Expect = 5e-25
Identities = 160/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851
||||| ||||| |||||||| || || ||||| | ||| ||||| ||| ||| ||
Sbjct 1032296 CGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCG--ATAATGTACGAC 1032353
Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| || | ||||| ||| ||||||| || | |||||| ||||| ||||| || ||||
Sbjct 1032354 CATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTT 1032413
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
| || | |||||||||||| || ||| || |||| | || ||||| | ||||
Sbjct 1032414 TATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGA 1032473
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||| ||||| | |||||||| || || |||||
Sbjct 1032474 TGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 111 bits (122), Expect = 1e-19
Identities = 168/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || || | |||||||| || | || | || ||||| ||||| | |
Sbjct 1032500 AAAATTTGCATACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATG 1032559
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|| ||||| || || | ||| || |||||||| || | || || || | ||||
Sbjct 1032560 TTGTAATCCGACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGC 1032619
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
|| ||||| ||||| ||||||||||| | ||||| |||||||| | | || ||
Sbjct 1032620 TGGTCTGGTGGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCC 1032679
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | | || || || | || |||||||| ||||| | |||||| ||||| ||||||||
Sbjct 1032680 GAGGGTTCCACTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 91.5 bits (100), Expect = 1e-13
Identities = 169/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 94763 TTTTTA--AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820
|||||| ||| ||| || ||| || | | || | |||||| || || || ||||| |
Sbjct 1031808 TTTTTACGAAAATTTGCATTCCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTT 1031867
Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880
|||| | || |||||| | || | ||| |||| ||||| || | || || |
Sbjct 1031868 TTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCA 1031927
Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940
| | |||||||||||| ||||||||||| || || | ||| || || || || |||
Sbjct 1031928 AACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGA 1031987
Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000
|| || | | ||||| || | ||||| ||||| ||||| || || || || || |
Sbjct 1031988 TTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAA 1032047
Query 95001 TCTGCAT 95007
| |||||
Sbjct 1032048 TTTGCAT 1032054
>seq391
Length=841353
Score = 120 bits (132), Expect = 3e-22
Identities = 169/235 (72%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833
||| | |||||||||||| |||||||||| |||||||| ||||||||||| | ||| ||
Sbjct 250927 TTAAAATCCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTA 250986
Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893
||| || || ||||| || || || ||||| |||| ||||| | || |||||
Sbjct 250987 ATCTGACAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATC 251046
Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953
|| ||||| |||||||| || | |||||| | || ||| | | || || | ||
Sbjct 251047 AGGCGGAATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATC-GTTTG 251105
Query 94954 G-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | | || ||||||| || | |||||| ||||| || |||||
Sbjct 251106 GCTCTACTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 102 bits (112), Expect = 7e-17
Identities = 170/246 (69%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821
|||| |||| ||| || || ||||| | ||| | ||| ||||| || || ||||| ||
Sbjct 251143 TTTTACAAAAATTTGCATACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTT 251202
Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAA 94881
|| | || || || || ||| | ||||| || | ||||||||| |||| |||||
Sbjct 251203 CTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAA 251262
Query 94882 TCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGAC 94941
|| || || ||||| ||||| ||||||||||| | |||||| ||| || | |
Sbjct 251263 TCGCTGTTGGTCTGGCGGAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAAT 251322
Query 94942 AGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGAT 95001
|||||| | | ||||| || | | || ||||||| || | || || ||||| ||
Sbjct 251323 AGTGTCGTTGGGTTCGACTTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAAT 251382
Query 95002 CTGCAT 95007
|| ||
Sbjct 251383 TTGTAT 251388
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|||||||| | || | ||| || || | || ||||| || || | ||| || |||
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | || || || || || || |||| || | |||||||||||| || |||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||||||||| | ||||| | |||| || | | ||||||| | || ||
Sbjct 730946 ATTCCTTCTTTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACC 731005
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || ||| | || || || | |||||||| || ||||||||
Sbjct 731006 TCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448283791987920
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