Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq1212 196 8e-45
>seq1212
Length=1133891
Score = 196 bits (216), Expect = 8e-45
Identities = 428/633 (68%), Gaps = 26/633 (4%)
Strand=Plus/Plus
Query 193584 CATTATGGAGATCTAACTGATCCTGTAAATGTTATGG---GTGTCATTAGGGCAGTTGAA 193640
|||||||| ||| | |||||| ||| |||| ||| || | || | | || ||
Sbjct 1007675 CATTATGGTGATATGACTGATA--GTACCTGTT-TGGTTCGTTTAATACATGAAATTAAA 1007731
Query 193641 CCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCA 193700
|| | ||| || |||||| | | ||| ||||||||||| ||||| || || || |
Sbjct 1007732 CCAGATGAAATATATAATTTAGCTGCACAAAGTCATGTAAAAGTATCATTCGATTTAAGT 1007791
Query 193701 GAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA-- 193758
|| || ||| | ||||||||||| | ||||| | || || | || ||| ||||||
Sbjct 1007792 GAATACACTGCCAATGTTGATGCACTTGGAACATTACGATTATTGGATGCAATTCGTACA 1007851
Query 193759 -----TGT------TGGGAATGGAGAAAGATGTTCGCA--TCTATCAGGCATCTACCAGC 193805
| | || |||||| || | | | ||||||| ||| |||
Sbjct 1007852 GCAAATATAACAAATGAAAATGGAAAATTAAAAATGAAATTCTATCAAGCAAGTACTTCA 1007911
Query 193806 GAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGC 193865
||| |||||||| || | || || | | ||||| ||||||||| |||||||
Sbjct 1007912 GAATTGTATGGTAAAGTACAAGAAGTACCGCAACGTGAAACAACACCATTTTATCCACGA 1007971
Query 193866 TCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCA 193925
||||| || ||||| ||||| | | || |||||||| | ||||||||||| |
Sbjct 1007972 TCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATTGTTGTCAATTATCGTGAAGCT 1008031
Query 193926 TATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAG 193985
|||| | | || ||||||||| |||||||| ||||| || ||| | |||||
Sbjct 1008032 TATGAAATGTTTGCCGTCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTGAA 1008091
Query 193986 ACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAG 194045
|||||||| || ||||||||||||| ||| | | || || | || | | | |||
Sbjct 1008092 ACATTTGTCACACGTAAGATTACACGTGGTGTGGCAAAAATTGTTCTT--AATCGACAAG 1008149
Query 194046 A-TTCTTTATCTTGG-TAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATG 194103
| ||| | |||| |||| | || | || | |||||||| || ||| |||||||
Sbjct 1008150 AATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATTGGGGCCATGCACGTGATTATG 1008209
Query 194104 TTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAG 194163
||||||| |||||||||||||| ||||| || | || || |||| ||| ||||| || |
Sbjct 1008210 TTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGGAAGATTTTGTCATTGCAACCG 1008269
Query 194164 GTGAACAGTATTCTGTTAGAGACTTTGT-GAAT 194195
||||| |||| ||| | || ||||| ||||
Sbjct 1008270 GTGAAGCACATTCAGTTCGTGAATTTGTCGAAT 1008302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807541855150320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |