Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1212 196 8e-45 >seq1212 Length=1133891 Score = 196 bits (216), Expect = 8e-45 Identities = 428/633 (68%), Gaps = 26/633 (4%) Strand=Plus/Plus Query 193584 CATTATGGAGATCTAACTGATCCTGTAAATGTTATGG---GTGTCATTAGGGCAGTTGAA 193640 |||||||| ||| | |||||| ||| |||| ||| || | || | | || || Sbjct 1007675 CATTATGGTGATATGACTGATA--GTACCTGTT-TGGTTCGTTTAATACATGAAATTAAA 1007731 Query 193641 CCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCA 193700 || | ||| || |||||| | | ||| ||||||||||| ||||| || || || | Sbjct 1007732 CCAGATGAAATATATAATTTAGCTGCACAAAGTCATGTAAAAGTATCATTCGATTTAAGT 1007791 Query 193701 GAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA-- 193758 || || ||| | ||||||||||| | ||||| | || || | || ||| |||||| Sbjct 1007792 GAATACACTGCCAATGTTGATGCACTTGGAACATTACGATTATTGGATGCAATTCGTACA 1007851 Query 193759 -----TGT------TGGGAATGGAGAAAGATGTTCGCA--TCTATCAGGCATCTACCAGC 193805 | | || |||||| || | | | ||||||| ||| ||| Sbjct 1007852 GCAAATATAACAAATGAAAATGGAAAATTAAAAATGAAATTCTATCAAGCAAGTACTTCA 1007911 Query 193806 GAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGC 193865 ||| |||||||| || | || || | | ||||| ||||||||| ||||||| Sbjct 1007912 GAATTGTATGGTAAAGTACAAGAAGTACCGCAACGTGAAACAACACCATTTTATCCACGA 1007971 Query 193866 TCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCA 193925 ||||| || ||||| ||||| | | || |||||||| | ||||||||||| | Sbjct 1007972 TCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATTGTTGTCAATTATCGTGAAGCT 1008031 Query 193926 TATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAG 193985 |||| | | || ||||||||| |||||||| ||||| || ||| | ||||| Sbjct 1008032 TATGAAATGTTTGCCGTCAATGGTATTCTATTCAATCATGAATCACCTAGACGTGGTGAA 1008091 Query 193986 ACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAG 194045 |||||||| || ||||||||||||| ||| | | || || | || | | | ||| Sbjct 1008092 ACATTTGTCACACGTAAGATTACACGTGGTGTGGCAAAAATTGTTCTT--AATCGACAAG 1008149 Query 194046 A-TTCTTTATCTTGG-TAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATG 194103 | ||| | |||| |||| | || | || | |||||||| || ||| ||||||| Sbjct 1008150 AATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATTGGGGCCATGCACGTGATTATG 1008209 Query 194104 TTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAG 194163 ||||||| |||||||||||||| ||||| || | || || |||| ||| ||||| || | Sbjct 1008210 TTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGGAAGATTTTGTCATTGCAACCG 1008269 Query 194164 GTGAACAGTATTCTGTTAGAGACTTTGT-GAAT 194195 ||||| |||| ||| | || ||||| |||| Sbjct 1008270 GTGAAGCACATTCAGTTCGTGAATTTGTCGAAT 1008302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807541855150320