Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq391 98.7 1e-15
>seq1
Length=3593316
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | || ||||||||||| || || ||| | |||||| | ||| | ||| ||
Sbjct 1031827 AATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATC 1031768
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|| || ||||| | |||||| ||| || ||||||||||| || || || |||||
Sbjct 1031767 GGATACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATCA 1031708
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| | | || | | ||| |||||| | ||||||| | ||| | ||| |||||
Sbjct 1031707 GCAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATAA 1031648
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
||| ||||||||||| || | ||| |||| || ||||| | || |||||
Sbjct 1031647 CATCCAAAAAGAATCGACATTACATTTGGTATTGCGACTTCGTGGTGGAAA 1031597
Score = 104 bits (114), Expect = 2e-17
Identities = 155/219 (71%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 26760 TCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT 26818
|||| ||| |||||| | || ||||||||||| ||||| ||| | ||||| | ||| |
Sbjct 1033491 TCAATCAATCATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGT 1033432
Query 26819 AGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACC 26878
||| || ||||||||||| | || ||| || ||| || |||||||| || ||
Sbjct 1033431 CGAACCATCGGACACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCC 1033372
Query 26879 TCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAG 26938
|| ||||| ||| || | || | | || |||||| | ||||||| | | | |
Sbjct 1033371 ACCAGATCAGCAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTC 1033312
Query 26939 CGACTATAACATTCAAAAAGAATCTACTATCCATCTGGT 26977
||| ||||| |||||||| ||||| || | ||| ||||
Sbjct 1033311 CGATTATAATATTCAAAAGGAATCAACATTGCATTTGGT 1033273
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 119646 TACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCATA 119705
|| ||| | |||||||||||||||||||| | || || || | ||||| | | ||||
Sbjct 930111 TATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTCTAATGATATTTGTTCCATA 930052
Query 119706 AACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCGA 119765
|| || || ||||||| || || |||| || || | | || || | ||| | |||
Sbjct 930051 AAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACAATCTAATTCAACCAATAAACGA 929992
Query 119766 TCTGCCACAA-ACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGAC 119824
|| | ||||| | || || || ||| |||| ||| | |||||| || | || | ||
Sbjct 929991 TC-GGCACAATATTCAATATAATCGGACATTAATTTAGCATTCATACCGATCAATGATAC 929933
Query 119825 CGGTAAAGCATTGGTAAAGAAATCCTT-TTCAAT 119857
||||| |||| ||| ||||||| ||| ||||||
Sbjct 929932 TGGTAATGCATCGGT-AAGAAATTCTTGTTCAAT 929900
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || |||||||| || ||||| ||| | || || | ||| | ||| ||
Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAACCATCG 1033194
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | || ||| || || || |||||||| || || || |||||
Sbjct 1033193 GACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCAG 1033134
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| || | || | | || |||||||||||||||| ||| | || |||||
Sbjct 1033133 CAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAAT 1033074
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
|| ||||||||||| || | ||| ||||
Sbjct 1033073 ATACAAAAAGAATCCACCTTACATTTGGT 1033045
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || ||||||| ||| ||||||| | ||| | || ||
Sbjct 1032054 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAGCCATCG 1031995
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | || ||| |||||| || || ||||| || || || |||||
Sbjct 1031994 GATACAATCGAAAATGTAAAAGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAG 1031935
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | | |||| || || |||||| | ||||||| | | | | ||| || ||
Sbjct 1031934 CAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTACAAT 1031875
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||||||||| || | ||| |||| ||
Sbjct 1031874 ATTCAAAAAGAATCCACCTTACATTTGGTGCT 1031843
>seq391
Length=841353
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||||||||| || || |||||| || | ||||| |||| |||||
Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| ||||| || || ||| || ||| || ||||||||||| || || ||||||
Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAAATTCAGGATAAAGAAGGGATTCCGCCTGATCAA 251041
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT--GATAGAAACGTCAGCGACTATA 26946
|| | | |||| | || || ||||| || ||| | | |||| || || |
Sbjct 251040 CAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGATTCGCGGACATTGTCA--GATTACA 250983
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996
|||||||||| ||||| ||| | |||||||| || | | |||||||||
Sbjct 250982 ACATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCGGTTGAGAGGAGGA 250933
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||||||||| || || || ||| | || | ||| ||||
Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || ||| ||||| || || ||||||||||| || || || |||||
Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAG 730933
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||||| |||| | || || ||||| || || | | | | |||||| |||
Sbjct 730932 CAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAAC 730873
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || |||||||| || || ||| | || || | |||||||||||
Sbjct 730872 ATCCAGAAAGAATCCACAATTCATTTAGTGCTTCGTCTTAGAGGAGG 730826
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|| ||| | |||||||| || ||||| |||||| || | | ||| | ||| | |||
Sbjct 251388 ATACAAATTTTTGTAAAGACCTTAACAGGAAAAAATATATCTTTGGAAGTCGAACCCAAC 251329
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || ||| || || || ||| |||||||||||||| || || || |||
Sbjct 251328 GACACTATTGAGAGTGTAAAGATGAAAATTCAGGACAAAGAAGGGATTCCGCCAGACCAA 251269
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGACTATA 26946
|| || | |||| | || ||||| | |||||| ||||| |||| ||||| |
Sbjct 251268 CAGCGATTAATTTTTGCTGGAAAACAGTTAGAAGATTCTAGAACTTTGTCA--GACTACA 251211
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| || || |||||||| || | || | || || |||||||||| ||
Sbjct 251210 ATATCCAGAAAGAATCCACATTACACTTAGTGCTTCGACTTAGAGGTGG 251162
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||||||||||||||| || ||| || | | || ||||| | |
Sbjct 251616 ATGCAGATATTTGTAAAAACATTAACAGGTAAAAATATTTCGCTTGAGGTAGAACCCACT 251557
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | || ||| || ||| || || ||||| || || || ||||||
Sbjct 251556 GACACAATTGAAAATGTGAAAACGAAAATTCAGGATAAGGAAGGAATTCCGCCTGATCAA 251497
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946
||| || | |||| | || |||||| | |||||| ||||| ||||| |||| |
Sbjct 251496 CAACGATTAATTTTTGCTGGAAAACAATTAGAAGATTCTAGAACTTTGTCAG--ACTACA 251439
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| || || |||||||| || | || | || || | |||||||||||
Sbjct 251438 ATATCCAGAAAGAATCGACGTTACACTTAGTGCTACGGCTTAGAGGAGG 251390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478654490103840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |