Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq391 125 6e-24
seq1 113 4e-20
seq569 89.7 4e-13
>seq391
Length=841353
Score = 125 bits (138), Expect = 6e-24
Identities = 175/242 (72%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||||||||| || || |||||| ||| | ||||||| ||| | |||
Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || || ||| || ||| || |||||||| || || || ||||||
Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAAATTCAGGATAAAGAAGGGATTCCGCCTGATCAA 251041
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGA-AACGTCAGCGATTATA 24168
||| | | |||| | || |||||||| || || | | || | |||| ||||| |
Sbjct 251040 CAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGATTCGCGGACATTGTCA--GATTACA 250983
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGAT 24228
|||||||||| ||||| || | ||| | ||||| | |||||||||||| | |||| ||
Sbjct 250982 ACATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCGGTTGAGAGGAGGATTTTAATTAT 250923
Query 24229 TC 24230
||
Sbjct 250922 TC 250921
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || ||||||||||| || || |||||| | || || || | ||
Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || ||| ||||| || || ||||||||||| || || || |||||
Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAG 730933
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||||| |||| | || |||||||| || || || | | | ||| || |||
Sbjct 730932 CAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAAC 730873
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || |||||||| ||||||||||||||| | | | ||||||||
Sbjct 730872 ATCCAGAAAGAATCCACAATTCATTTAGTGCTTCGTCTTAGAGGAGG 730826
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|| ||| | |||||||| || ||||| |||||| || | | |||||||| |||||
Sbjct 251388 ATACAAATTTTTGTAAAGACCTTAACAGGAAAAAATATATCTTTGGAAGTCGAACCCAAC 251329
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || ||| || || || ||| ||||||||||| || || || || |||
Sbjct 251328 GACACTATTGAGAGTGTAAAGATGAAAATTCAGGACAAAGAAGGGATTCCGCCAGACCAA 251269
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTATA 24168
||| || | |||| | || || || | |||||| |||| |||| || || |
Sbjct 251268 CAGCGATTAATTTTTGCTGGAAAACAGTTAGAAGATTCTAGAACTTTGTCA--GACTACA 251211
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| || || |||||||| ||| | || |||||| | || | ||||| ||
Sbjct 251210 ATATCCAGAAAGAATCCACATTACACTTAGTGCTTCGACTTAGAGGTGG 251162
>seq1
Length=3593316
Score = 113 bits (124), Expect = 4e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || ||||||||||| || || ||| | || ||| | ||||| || |||
Sbjct 1031827 AATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAA-CCAT 1031769
Query 24050 CG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108
|| | || ||||| | |||||| ||| || ||||||||||| || || || ||||
Sbjct 1031768 CGGATACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATC 1031709
Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATA 24168
| ||| | |||| | | ||| || ||| | ||||||| ||| | ||||||||
Sbjct 1031708 AGCAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATA 1031649
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|||| ||||||||||| ||| | ||||| || ||
Sbjct 1031648 ACATCCAAAAAGAATCGACATTACATTTGGTATT 1031615
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || ||||||||||| ||||| ||| | || || | |||||||| ||| |
Sbjct 1033481 ATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAA-CCATC 1033423
Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
| |||||||||| | || ||| || ||| || ||||||||||| || || |||||
Sbjct 1033422 GGACACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCACCAGATCA 1033363
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|| || |||| | | || || ||| | ||||||| | | | |||||||||
Sbjct 1033362 GCAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTATAA 1033303
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|||||||| ||||| ||| | ||||| || ||
Sbjct 1033302 TATTCAAAAGGAATCAACATTGCATTTGGTATT 1033270
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || |||||||| || ||||| ||| | ||||| | |||||||| ||| |
Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAA-CCATC 1033195
Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
| |||| ||||| | || ||| || || || |||||||| || || || |||||
Sbjct 1033194 GGACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCA 1033135
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|| || |||| | | || || ||||||||||||| | ||| | ||||||||
Sbjct 1033134 GCAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAA 1033075
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| ||||||||||| || | ||||| || ||
Sbjct 1033074 TATACAAAAAGAATCCACCTTACATTTGGTATT 1033042
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || ||||| | || || ||| | ||||| | ||||||||| ||| |
Sbjct 1032282 ATGCAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAG-CCATC 1032224
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|| || ||||| | || ||| || || |||||||| || || || || |||||
Sbjct 1032223 TGATACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCA 1032164
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|| || |||| | | ||| |||||| | ||||||| |||| | |||||| ||
Sbjct 1032163 GCAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAA 1032104
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203
||||||||| ||||| ||| | ||||| || |||
Sbjct 1032103 CATTCAAAAGGAATCGACATTGCATTTGGTTTTA 1032070
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| || ||||| ||| | ||||| | ||||| || ||
Sbjct 1032738 ATGCAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCG 1032679
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| ||||| || | ||||| || || ||||||||||| || || || || ||
Sbjct 1032678 GATACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 1032619
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||||| || ||||| || || ||||||| | ||| | ||||| |||
Sbjct 1032618 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAAC 1032559
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATT 24208
|||||||||||||| ||| ||||| | || || ||||
Sbjct 1032558 ATTCAAAAAGAATCGACACTTCATCTCGTATTGCGATT 1032521
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || ||||||| ||| |||| || | ||||||||| ||| |
Sbjct 1032054 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAG-CCATC 1031996
Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
| | || ||||| | || ||| |||||| || || ||||| || || || |||||
Sbjct 1031995 GGATACAATCGAAAATGTAAAAGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCA 1031936
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|| | |||||| || || || ||| | ||||||| | | | | | |||||| ||
Sbjct 1031935 GCAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTACAA 1031876
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200
|||||||||||||| || | ||||| |||
Sbjct 1031875 TATTCAAAAAGAATCCACCTTACATTTGGTG 1031845
>seq569
Length=351751
Score = 89.7 bits (98), Expect = 4e-13
Identities = 183/266 (69%), Gaps = 7/266 (3%)
Strand=Plus/Minus
Query 133008 TTTCGTATAATCGCTCAAATTCTTCGCCATAGCAGTCGTTCAAACCGGGACACTCGTCAG 133067
|||| |||||| | ||||||||||| || | || || | | ||| ||||| || | |
Sbjct 123786 TTTCATATAATTGTTCAAATTCTTCACCCCAACAATCATGTAGACCAGGACATTCATTCG 123727
Query 133068 GACACATCAATGACCATTTTTC-TCCTGCGCTCACCCTTTTCATGAACAACGAAGGTGTC 133126
||||||| |||||||| || | ||| | || | |||||| || || ||| ||
Sbjct 123726 GACACATTAATGACCACATTGCATCCATTTC-AACACGTTTCATAAATAAATCCGGTATC 123668
Query 133127 CACATGGCAAAAAATAAATCGCGAGC-CTTCATATCTTCCGCGCCCATATTTCGTTTCAA 133185
|| | ||| | |||| ||| || || | | || ||||||| || |||| ||||||
Sbjct 123667 CATAATGCATAGAATAGATCACGTGCACGTAAT-TCTTCCGAACCAGTATTCTTTTTCAA 123609
Query 133186 GTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATATACGGCCAAAGCGCCTTT 133245
|| ||||| | ||| || |||| |||||| || || | ||| | || || || |||
Sbjct 123608 ATCTAAAAATGCAAATATATCTGAATGCCATGGTTCTAGATAGATAGCAAATGCACCTGG 123549
Query 133246 CCTTTT---ACCTCCCTGATCCACAT 133268
| ||| ||| || ||||| ||||
Sbjct 123548 ACGTTTTCCACCACCTTGATCAACAT 123523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429929072924910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |