Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
seq391 100 2e-16
>seq1
Length=3593316
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||||||||| || ||||| | || || |||||||| ||| | ||| ||| |||
Sbjct 1031827 AATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAA-CCAT 1031769
Query 115345 CG-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|| | ||| | | | | || ||| |||||| || |||||||| | || ||||
Sbjct 1031768 CGGATACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATC 1031709
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| | | || | ||| || |||||||| ||||||| ||| || |||||||||
Sbjct 1031708 AGCAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATA 1031649
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
|||| |||||||| || || ||||| |||| ||| || | || || |||||
Sbjct 1031648 ACATCCAAAAAGAATCGACATTACATTTGGTATTGCGACTTCGTGGTGGAAA 1031597
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| || ||||| | || || ||||||||||| | ||| || ||| |
Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAA-CCATC 1033195
Query 115346 G-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
| ||||| | | | | || ||| ||||| ||||||||||| | || |||||
Sbjct 1033194 GGACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCA 1033135
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||| || | || | ||| || |||||| | ||||||| | ||| || | ||||||||
Sbjct 1033134 GCAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAA 1033075
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|| |||||||| || || ||||| |||| ||| | || || || ||||
Sbjct 1033074 TATACAAAAAGAATCCACCTTACATTTGGTATTGCGTTTACGTGGTGGAA 1033025
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| |||||||| || || || ||||| ||||| | ||| ||| ||| |
Sbjct 1032282 ATGCAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAG-CCATC 1032224
Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| || | | | | |||||| ||||| || ||||| || | ||| |||||
Sbjct 1032223 TGATACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCA 1032164
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||| || | || | ||| || || ||||| ||||||| | ||| || ||||||| ||
Sbjct 1032163 GCAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAA 1032104
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTT 115497
||||||||| || || || | ||| |||| ||
Sbjct 1032103 CATTCAAAAGGAATCGACATTGCATTTGGTTTT 1032071
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| ||||| || || || || ||||| || || | ||| ||| ||| |
Sbjct 1032054 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAG-CCATC 1031996
Query 115346 G-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
| | || | | | | |||||| || ||| ||||| ||||| | || |||||
Sbjct 1031995 GGATACAATCGAAAATGTAAAAGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCA 1031936
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||| | | |||| || || |||||||| ||||||| | ||| | ||||||| ||
Sbjct 1031935 GCAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTACAA 1031876
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495
||||||||||| || || ||||| |||||
Sbjct 1031875 TATTCAAAAAGAATCCACCTTACATTTGGTG 1031845
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| |||||||||||||| | || || ||||||||||| | ||| ||| ||
Sbjct 1032738 ATGCAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCG 1032679
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || ||| | | || || ||||| || |||||||| | || || |||
Sbjct 1032678 GATACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 1032619
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | | |||| || |||||||| | ||||||| | ||| || | ||||| |||
Sbjct 1032618 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAAC 1032559
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||||||||| || || | ||| | || ||| |||| || || ||
Sbjct 1032558 ATTCAAAAAGAATCGACACTTCATCTCGTATTGCGATTACGTGGTGG 1032512
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||| || || ||||| | || || |||||||| || | ||| || ||| |
Sbjct 1033481 ATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAA-CCATC 1033423
Query 115346 G-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
| |||| | | | | || ||| |||||| |||||||||||| | || |||||
Sbjct 1033422 GGACACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCACCAGATCA 1033363
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||| || | || | ||| || |||||||| ||||||| || || ||||||||||
Sbjct 1033362 GCAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTATAA 1033303
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||||||| || || || | ||| |||| |||
Sbjct 1033302 TATTCAAAAGGAATCAACATTGCATTTGGTATTG 1033269
>seq391
Length=841353
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| ||||| | || ||||||| ||| | ||||| ||| | | |
Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || ||| | || ||| |||||| ||||||||||| | || ||||||
Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAAATTCAGGATAAAGAAGGGATTCCGCCTGATCAA 251041
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | | |||| ||| || || ||| | || ||| || || | ||||| |||
Sbjct 251040 CAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGATTCGCGGACATTGTCAGATTACAAC 250981
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513
|||||||| || || ||| | ||| |||||||| | ||| ||||||||
Sbjct 250980 ATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCGGTTGAGAGGAGGA 250933
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| || ||||| | || || || | ||||||| | || ||| | |
Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993
Query 115346 GACACTGTTG-GACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| | | | ||||| |||| | || |||||||| | ||| |||||
Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAA-TCCAAGACAAAGAAGGAATTCCCCCGGATCA 730934
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||||||||||| ||| || || ||| |||| || || || | |||| || ||
Sbjct 730933 GCAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAA 730874
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495
||| || ||||| || || || ||| | |||
Sbjct 730873 CATCCAGAAAGAATCCACAATTCATTTAGTG 730843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425337146910640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |