Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 2e-25
seq335 111 1e-19
seq391 104 2e-17
seq768 100 3e-16
seq558 98.7 9e-16
>seq1
Length=3593316
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || || |||| || | ||| | ||||| || ||||||||||||||||| |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || ||||| ||||| ||| | || ||||| |||||||| || ||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||||||||| |||||| ||||| | || | ||||| | || || |
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||||||||| || | |||||| || |||||||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||| || ||||||| ||||| || ||||| ||||| |||||| |
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | || || || || |||| ||||||||||| || || ||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| |||||| ||| |||| | || | |||||| | | || |
Sbjct 1031720 ATACCTTCTTTGTCTTGGATTTT-TGCTTTGACATTTTCGATAGTATCCGATGGTTCCAC 1031778
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | |||||||||||| | |||||||||||||| |||||
Sbjct 1031779 TTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| | || ||||| | ||||| ||||||||||||||||||||| |
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | || || | ||||| || || |||| || || ||||| || || ||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| |||||||| |||||| || | | || | ||||| | | |||||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACT 1032235
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||||||||||| |||||||| |||||||| |||||
Sbjct 1032236 TCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAAT-CGCT 131066
||||| || | ||||| || ||||| | || ||||| ||||| |||||||||| || |
Sbjct 1032284 CCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGAT 1032343
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || || || |||| || || || || |||| ||||| |||||||| || ||
Sbjct 1032344 AAT-GTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGG 1032402
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
||||| ||||| || ||| ||| || ||| | | || | ||||| | | || |
Sbjct 1032403 AATTCCCTCTTTATC-CTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAA 1032461
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||| | || | ||||||||| || | ||||| |||||||| |||||
Sbjct 1032462 CGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || ||||||| || ||||||| ||| || || ||||| || || ||||| |
Sbjct 1033027 CCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGAC 1033086
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || || || || || || |||| || || ||||| || || ||
Sbjct 1033087 AATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033146
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| |||||||| || |||||| || | | || | ||| || | | ||||
Sbjct 1033147 ATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACT 1033206
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| |||||| || || | ||||||||||||||| |||||
Sbjct 1033207 TCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
>seq335
Length=939964
Score = 111 bits (122), Expect = 1e-19
Identities = 602/939 (64%), Gaps = 25/939 (3%)
Strand=Plus/Minus
Query 145254 CGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGT 145313
||| ||||| |||| |||| || |||| ||||| ||||| ||||| ||| ||
Sbjct 179929 CGTTCCACAAGTCGAACTGGAATTTGCCTTCGCTCGCGGGCGAGCCTTCGAAGCTCGCGT 179870
Query 145314 AACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTC 145372
| | |||| | || ||||||||| ||||| || |||||||| || || |||
Sbjct 179869 A-CGGCCCGTGCTCCTTCGCGAGCTCGACGCTCGCGGTCACCGCGCCGAAGTAGATCGTC 179811
Query 145373 TCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGT 145432
||| || | | |||| | |||| || ||| ||| |||||| ||||||||
Sbjct 179810 TCGAAGATGTTCTTGTTCACTTCGTTCGCCTCGGGGCTGTCGAACGGCAGCCGCAGCAGC 179751
Query 145433 ACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTC 145492
| || || |||| || || | || | |||||| ||||| || || ||||||
Sbjct 179750 TGCAGCGCGTCCGCGAAGCCTTGCACGCCGATGCCGATCGGCCGGTGCCGCAGGTTGCTG 179691
Query 145493 ATCCTCGCCGACTCGATAGGATATC-GATTACGGTCGATAATTTTATTCAAGTTTCGCAC 145551
|| |||| |||| | || | ||| ||||| | || |||| ||| ||
Sbjct 179690 CGCCGCGCCTTCTCGGTCACGTAGAAGCCCACG-TCGATCACGTTGTTCAGGTTCTGCGT 179632
Query 145552 TACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCAC 145611
|| | ||| | | | || ||| || ||| || || || || ||| ||||
Sbjct 179631 CACGATCTTCGCGACCTCGAACAGCTTCTCGTAGTTGAAGCGCCGCTTCTCGACGTCCAC 179572
Query 145612 ACA-GCTATTGACGGCGAT--CGACGCCAAATTACAAACTGCCGTCTCCTCG-GCGTCGC 145667
| || | | |||| |||||| | || || || || |||||||| ||| ||
Sbjct 179571 GTACGCG---GGCAGCGACAGCGACGCGAGGTTGCACACCGCGATCTCCTCGCGCGACG- 179516
Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727
|||| || || | || | ||||| || | | |||||| || || || |||| |
Sbjct 179515 TGTACTGCACCACTTCCGTGCACAGGTTCGAGGACTGGATGGTGCCGAGGTTCCGCTGGT 179456
Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787
| || | |||||||||||||||||| | || |||||| ||| ||||| | |||||
Sbjct 179455 TCGACTTGCGGTTGCACGCGTCCTTGTACACCAAGTACGGATTGCCCGTCTCGATCTGCG 179396
Query 145788 TCTCCACGATAAAACGGTGCA-AG-TCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTC 145845
| | ||| || || || || || | |||| ||||||| || | |||| |||
Sbjct 179395 TGTTCACAAT--GACCGTCCAGAGCGCGCGCGCCTTCACCTGCCGCACGAAGCGCTGCTC 179338
Query 145846 TTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGG 145905
| ||||| | |||| ||| | || ||| | | || || ||| ||| ||| ||
Sbjct 179337 GGCCTCGTAGCGCGTGTACAGCGCGTCGAACTCCGCGCCCCAGACTTCGAACAAGCCCGG 179278
Query 145906 ACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAA 145965
||| |||||||||||| ||| ||||||| ||| ||||| ||| |||||
Sbjct 179277 CGACTGCGCGGGACACATCAGACTCCACACGCCGTCTTCGTCCACGCGGCGCATGAACAA 179218
Query 145966 ATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAA-TCCTCAGCACCCATGT 146024
|| | ||||| | | | ||| |||| | |||| || || || ||
Sbjct 179217 GTCGTTGATGTACAGCCCCAGGAAGAGGTCCCGCG-TGCGCAACTCTTCGTTGCCGTGGT 179159
Query 146025 TTCGCTTCAAAT-TAAGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCG 146083
| ||| || | | | || | | ||||||| ||||||||||| || | |||| |||
Sbjct 179158 TGCGCCGCAGCTCGATGAACTCGA-AGATGTCTGCGTGCCACGGCTCCAGGTAGATCGCG 179100
Query 146084 AGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACG 146140
| | | ||||| || || ||| |||||||| |||| || | | ||| || |||
Sbjct 179099 AAGCCGCCTTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAACACG 179040
Query 146141 CGCACCATGGGCTCGACGCCGCTGGCTACG-CCGTTCGT 146178
|||| ||| ||| ||| ||| | ||| || ||||||||
Sbjct 179039 CGCAGCATCGGCACGATCCCG-TTGCTGCGCCCGTTCGT 179002
>seq391
Length=841353
Score = 104 bits (114), Expect = 2e-17
Identities = 155/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078
||| ||||||||||| || || || || || || |||||||| ||| | |||||
Sbjct 730837 ACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTT 730896
Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138
||| ||||| ||||| || || | || | | ||||| ||||| || |||||||||||
Sbjct 730897 GTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCTTT 730956
Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198
||| |||||| |||| ||| | ||| || | | || | || | |||||
Sbjct 730957 GTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAAT 731016
Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
| | || || |||| ||||| |||||||||||||| |||
Sbjct 731017 GTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCATCACT 731056
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || | ||| |||| ||| | ||| | || || |||||||||||||||||||| |
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || ||||| || || || ||||| || || | ||||| ||||| || || || ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA-GCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| |||||||| || |||||| || | ||| || | |||||| | | ||| |
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCT-TTCAATGGTATCGTTTGGCTCTAC 251112
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| | || |||| || || | ||||||||| ||||| |||||
Sbjct 251113 TTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
>seq768
Length=1243675
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || |||| |||||||| || || || |||||||||||||| |||||||| ||
Sbjct 1130695 GCCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGC 1130754
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| ||| || | |||||| || || | || | ||||||||||||||| ||
Sbjct 1130755 GAGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGG 1130814
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGA-GCTGCTCCACAGTATCGGTGGACTCGA 131185
|| || || ||||| ||| || |||| ||| ||| | || ||| | | || |
Sbjct 1130815 AATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGCT-CTCGATCGTGTCGTTTGGGTCCA 1130873
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | | | || || || || || || ||||| || |||||
Sbjct 1130874 CCTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
>seq558
Length=611125
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||||| ||||| || || || || || ||||| || ||||||||||| ||
Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || |||||||| || || |||| || |||||||||||||| ||
Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGA-GCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || |||||||| ||| || |||| ||| ||| | || ||| | | || |
Sbjct 303820 ATGCCCTCTTTGTCCTGGATCTTAGCTTTGACGCT-CTCGATCGTGTCGTTTGGGTCCAC 303762
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | | | || || || || || || || || ||||||||
Sbjct 303761 TTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCAT 303714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472004999988480
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