Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 4e-13
seq768 87.8 1e-12
>seq1
Length=3593316
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || | || ||||| ||| | || || || ||||| ||||| || |||| |
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || ||||||||||| || ||| | || | ||||| || || ||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || |||||||| || |||||| || || | | | ||| || || |||
Sbjct 1031720 ATACCTTCTTTGTCTTGGATTTTTGCT--TTGACATTTTCGATAGTATCCGATGGTTCCA 1031777
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
||||| |||||||||||| ||||||| ||||| || ||||| ||||||
Sbjct 1031778 CTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
>seq768
Length=1243675
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || |||| ||| |||| || | ||| ||||||||||| ||||||||||| ||
Sbjct 1130696 CCGCCACGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 1130755
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || |||| ||||| || || || ||| |||| || ||||| |||||| ||
Sbjct 1130756 AGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGA 1130815
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| ||||| || || ||| || || | | |||||| || |||
Sbjct 1130816 ATGCCCTCCTTGTCCTGGATCTTAGCT--TTGACGCTCTCGATCGTGTCGTTTGGGTCCA 1130873
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||| | || || || ||||| || || || || |||||
Sbjct 1130874 CCTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTGCAT 1130922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405081473272780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |