Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 3e-32
seq657 136 3e-27
seq658 111 1e-19
seq471 109 4e-19
seq380 109 4e-19
seq391 107 1e-18
>seq1
Length=3593316
Score = 152 bits (168), Expect = 3e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||| |||||||| | ||| ||| ||||| || |||||||| |
Sbjct 1032282 TACCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCG 1032341
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || ||| | || ||||||||||| |||||||| || | ||||| || || | |
Sbjct 1032342 ATAATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTG 1032401
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||| ||| ||||||| ||||||||| | || ||||| |||||
Sbjct 1032402 GAATTCCCTCTTTATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAA 1032461
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| |||||||| || |||||||| ||||| ||||||||||| || |||||
Sbjct 1032462 CGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 129 bits (142), Expect = 4e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| || |||||||| | || ||||||||||| |||||||| |
Sbjct 1032054 TACCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGG 1032113
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||||| | | | || || ||||| ||||||||||| || | ||||| ||||| | ||
Sbjct 1032114 ACAAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGG 1032173
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||||||| ||||| || ||||| | || ||||| || |
Sbjct 1032174 GAATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGA 1032233
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| ||||||||||||||||| || | ||||| ||||| || |||||
Sbjct 1032234 CTTCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 127 bits (140), Expect = 1e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | | |||||| |||||||| | || |||||||||||||| ||||| |
Sbjct 1033253 TACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGG 1033312
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||||| ||| | || || |||||||| || ||||| || | ||||| ||||| | |
Sbjct 1033313 ACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTG 1033372
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||| || |||||| || ||||| | || || || ||| |
Sbjct 1033373 GAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGA 1033432
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321
|||| || || || |||||||| ||||| ||||| ||||| || |||||| ||
Sbjct 1033433 CTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATGATT 1033485
Score = 113 bits (124), Expect = 3e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162
||||| |||||||| | || || ||||| || || ||||| ||||| || |
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCA 1031671
Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222
|| || ||||||||||||||||| || | || || ||||| | || | |||||||||
Sbjct 1031672 TCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTG 1031731
Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282
|| |||||| || ||||| | || |||||| ||| ||||| || || ||
Sbjct 1031732 TCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGATG 1031791
Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||||| ||||| ||||| ||||| || |||||
Sbjct 1031792 GTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||||| || | |||||| || || |||||||| |||||||| |
Sbjct 1032510 TACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCG 1032569
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| || | || || | ||||| || || || || | ||||| || || | |
Sbjct 1032570 ACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTG 1032629
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||||| ||||| ||| ||||| | | ||||| ||| |
Sbjct 1032630 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCA 1032689
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| |||||||| |||||||| ||||| ||||| || || ||||||||
Sbjct 1032690 CTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | | ||| | ||||||||| | ||| || ||||||||||||||||
Sbjct 1031824 CATT-CCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAAT 1031882
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| || || ||| | || || |||||||| || || || || | ||||| ||||| |
Sbjct 1031883 CGGATAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTG 1031942
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|| | ||||| || || ||| || || ||||| | || ||||| |
Sbjct 1031943 GTGGAATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCT 1032002
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| || || || |||||||| || | ||| || ||||| || |||||
Sbjct 1032003 CGACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
>seq657
Length=2482312
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 7123 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGT 7064
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 7063 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 7029
Score = 111 bits (122), Expect = 1e-19
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 3961 CTCTCTCTTCAAAGTGCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGC 3902
Query 20007 GGTAATATTTAGCCTT 20022
|| |||||||| |||
Sbjct 3901 TGTGATATTTAGTCTT 3886
>seq658
Length=722326
Score = 111 bits (122), Expect = 1e-19
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 203714 CTCTCTCTTCAAAGTGCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCGC 203773
Query 20007 GGTAATATTTAGCCTT 20022
|| |||||||| |||
Sbjct 203774 TGTGATATTTAGTCTT 203789
>seq471
Length=29810
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||| |||| | ||| | ||||||||
Sbjct 20289 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGTTGGGGACAGTAGGAATCTCGT 20230
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||| |||||||| |||||
Sbjct 20229 TGATCCATTCATGCGCGTCATTAATTAGACGACGA 20195
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956
||||||||||||||||||||||||||||||||| | || | ||| | ||||||||
Sbjct 26690 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGCAGTTGGGGACAGTAGGAATCTCGT 26631
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||| |||||||| |||||
Sbjct 26630 TAATCCATTCATGCGCGTCATTAATTAGACGACGA 26596
Score = 86.0 bits (94), Expect = 4e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||| ||| |||| |||||||||||||| |||| ||||||||||||||||||||||
Sbjct 29408 CTCTCCTTTCGAAGTGCTTTTCAACTTTCCTTCACAGTACTTGTTCGCTATCGGTCTCTT 29349
Query 20007 GGTAATATTTAG 20018
||| |||||||
Sbjct 29348 AGTAGTATTTAG 29337
>seq380
Length=884649
Score = 109 bits (120), Expect = 4e-19
Identities = 81/95 (85%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||| |||| | ||| | ||||||||
Sbjct 20627 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGTTGGGGACAGTAGGAATCTCGT 20568
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||| |||||||| |||||
Sbjct 20567 TGATCCATTCATGCGCGTCATTAATTAGACGACGA 20533
>seq391
Length=841353
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| |||||||| |||||||||| ||| | ||| ||||||||||| |||||||| |||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
|| || ||||| | ||| ||||| ||||| |||| || |||||||| | ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||||| ||| |||||| ||||| | | | ||||| || |||
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACT 251113
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | | |||| |||| || ||||| ||||| || || || |||||
Sbjct 251114 TCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/233 (69%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| ||||| | || | ||| || || | || || || || |||||||| || |
Sbjct 251388 TACCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTG 251447
Query 38149 ACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
||||| |||| || |||||||||||||| ||||| |||| |||||||||||
Sbjct 251448 ACAAA----GTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCA 251503
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264
| || | ||||| || ||| |||||| |||||||| | | || || |
Sbjct 251504 GGCGGAATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGT 251563
Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || | | |||| ||||||| || || ||||| || |||||||||||
Sbjct 251564 TCTACCTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 89.7 bits (98), Expect = 3e-13
Identities = 160/233 (69%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | || | ||| || || | ||| || || || |||||||| || |
Sbjct 251160 TACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCTG 251219
Query 38149 ACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
||||| |||| || ||||| |||||||| ||||| |||| || ||||| ||
Sbjct 251220 ACAAA----GTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCT 251275
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264
| || | |||||||||||| |||||| ||| ||| ||| | ||| || |
Sbjct 251276 GGCGGAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGT 251335
Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||| || | ||| |||| || || ||||| || || || || || ||
Sbjct 251336 TCGACTTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334941803372582
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