Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 6e-37
seq391 138 1e-27
seq768 84.2 2e-11
>seq1
Length=3593316
Score = 168 bits (186), Expect = 6e-37
Identities = 167/214 (78%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || ||||| || |||||||||||| ||||||| | |||||||| | ||
Sbjct 1031827 AATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATC 1031768
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|| |||||||| |||| ||||||||| || ||||||||||| |||||||| |
Sbjct 1031767 GGATACTATCGAAAATGTCA---AAGCAAAAATCCAA-GACAAAGAAGGTATTCCACCAG 1031712
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
| || ||||| | || |||||||| |||||||| ||||||| ||| || || |||||
Sbjct 1031711 ATCAGCAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATT 1031652
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
| || || ||||||||||| || ||||||| ||
Sbjct 1031651 ATAACATCCAAAAAGAATCGACATTACATTTGGT 1031618
Score = 145 bits (160), Expect = 7e-30
Identities = 161/212 (76%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||| || ||||| |||||| ||||||| | ||||| || | ||
Sbjct 1033481 ATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAACCATCG 1033422
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| | || |||| |||| ||| || |||||||| |||||||| ||
Sbjct 1033421 GACACCATCGAA--AATGTTAAAGCCAAAATTCAA-GATAAAGAAGGCATTCCACCAGAT 1033365
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || || | || ||||| || |||||||| ||||||| ||| ||| || ||||||
Sbjct 1033364 CAGCAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTAT 1033305
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||||| ||||| || | ||||| ||
Sbjct 1033304 AATATTCAAAAGGAATCAACATTGCATTTGGT 1033273
Score = 138 bits (152), Expect = 1e-27
Identities = 158/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||| |||||| |||||||| | || || || | |||
Sbjct 1032510 ATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATCACATTAGACGTTGAACCATCT 1032451
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| ||||| |||||| ||| || ||||| || |||||||| |||||
Sbjct 1032450 GATACAATCGAAAATGTGAAGGCAAAAATTCAG-GATAAAGAGGGAATTCCACCAGACCA 1032392
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| || | || |||||||| |||||||||||||||| ||| || | ||||||||
Sbjct 1032391 GCAACGTTTGATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACATTATCGGATTACAA 1032332
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207
|| |||||||| || || | ||||| ||
Sbjct 1032331 CATCCAAAAAGAGTCAACTTTGCATTTGGT 1032302
Score = 134 bits (148), Expect = 1e-26
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || |||||||| |||||| |||| ||| | |||||||| | ||
Sbjct 1032738 ATGCAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCG 1032679
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || || || | ||| |||||| ||||||||||| |||||||| |||||
Sbjct 1032678 GATACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 1032619
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | ||||| || |||||||| | ||||||| || || || ||||||||
Sbjct 1032618 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAAC 1032559
Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202
|||||||||||||| || || |||
Sbjct 1032558 ATTCAAAAAGAATCGACACTTCAT 1032535
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || ||||| |||||||| || ||| |||| || | ||||| || | ||
Sbjct 1033253 ATGCAAATTTTCGTAAAAACTTTGACTGGCAAAACCATTACTTTGGAAGTCGAACCATCG 1033194
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| |||| |||||| || |||||||| |||||||| || ||
Sbjct 1033193 GACACTATCGAAAATGTGAAAGCTAAAATCCAGGATAAAGAAGGTATTCCACCAGATCAG 1033134
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | || ||||| || |||||| | ||||||| || || || ||||| |||
Sbjct 1033133 CAACGATTGATCTTTGCTGGTAAACAACTCGAAGATGGCCGAACATTGTCGGATTATAAT 1033074
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207
|| |||||||||||||| ||||||| ||
Sbjct 1033073 ATACAAAAAGAATCCACCTTACATTTGGT 1033045
Score = 132 bits (146), Expect = 4e-26
Identities = 160/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || |||||| | ||||| | ||||| ||| | ||
Sbjct 1032054 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAAACGATCACTTTGGAAGTCGAGCCATCG 1031995
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||| | || |||| || | ||| || || ||||| |||||||| ||
Sbjct 1031994 GATACAATCGAA--AATGTAAAAGCCAAGATTCAA-GATAAGGAAGGTATTCCACCAGAT 1031938
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| || || | ||||| || || |||||||| ||||||| || || | |||||||
Sbjct 1031937 CAGCAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGCCGTACCTTATCCGATTAC 1031878
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||||||||||||||| ||||||| |||||
Sbjct 1031877 AATATTCAAAAAGAATCCACCTTACATTTGGTGCT 1031843
>seq391
Length=841353
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| ||||||||||| || || || |||||| || | | || || || | ||
Sbjct 251616 ATGCAGATATTTGTAAAAACATTAACAGGTAAAAATATTTCGCTTGAGGTAGAACCCACT 251557
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || |||| | |||| ||| || || ||||| ||||| ||||| ||
Sbjct 251556 GACACAATTGAAAATGTGAAAACGAAAATTCAG-GATAAGGAAGGAATTCCGCCTGATCA 251498
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | |||||||| || ||||||||||||||| | | ||| || || |||||
Sbjct 251497 ACAACGATTAATTTTTGCTGGAAAACAATTAGAAGATTCTAGAACTTTGTCAGACTACAA 251438
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || |||||||| ||| |||| ||||||||| |||| ||||||||
Sbjct 251437 TATCCAGAAAGAATCGACGTTACACTTAGTGCTACGGCTTAGAGGAGG 251390
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|| ||||| ||||||||||| || || || ||| || | | ||||| || |
Sbjct 251388 ATACAAATTTTTGTAAAGACCTTAACAGGAAAAAATATATCTTTGGAAGTCGAACCCAAC 251329
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| ||| | ||| ||||| ||||||||||||||||| || ||||||
Sbjct 251328 GACACTATTGAGAGTGTAAAGATGAAAATTCAGGACAAAGAAGGGATTCCGCCAGACCAA 251269
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | |||||||| || ||||| ||||||||| | | ||| || || ||||||
Sbjct 251268 CAGCGATTAATTTTTGCTGGAAAACAGTTAGAAGATTCTAGAACTTTGTCAGACTACAAT 251209
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || ||||||||||| |||| |||||||| | || ||||| ||
Sbjct 251208 ATCCAGAAAGAATCCACATTACACTTAGTGCTTCGACTTAGAGGTGG 251162
Score = 125 bits (138), Expect = 6e-24
Identities = 183/255 (72%), Gaps = 3/255 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| |||||||| |||||||| || ||| || | ||||||| ||| |
Sbjct 251160 ATGCAAATTTTTGTAAAAACTTTGACAGGAAAAAATATTTCTCTCGAAGTAGAGCCAAAC 251101
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || |||| | |||| ||| || |||||||||||||| ||||| ||
Sbjct 251100 GATACCATTGAAAGCGTGAAAACGAAAATTCAG-GATAAAGAAGGGATTCCGCCTGATCA 251042
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||||| | |||||||| || || ||| | || ||| || || || ||||||||
Sbjct 251041 ACAGCGGTTAATTTTTGCTGGAAAGCAACTTGACGATTCGCGGACATTGTCAGATTACAA 250982
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT-ATTATA 25236
|||||||| ||||| || | ||| | ||| | || | ||||||||| || |||||
Sbjct 250981 CATTCAAAAGGAATCAACTTTGCATCTGGTGTTGCGGTTGAGAGGAGGATTTTAATTATT 250922
Query 25237 CTATTAACAAATAAA 25251
| | ||| | |||||
Sbjct 250921 CCAATAAAAGATAAA 250907
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || || || || || ||| || | || ||||| | |
Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| ||||| | || |||||| ||||||||||| ||||| || || ||
Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAG 730933
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | |||||||||| || || ||| |||| || | |||||| | ||| |||||
Sbjct 730932 CAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAAC 730873
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || ||||||||||| | ||||||||||| | || ||||||||
Sbjct 730872 ATCCAGAAAGAATCCACAATTCATTTAGTGCTTCGTCTTAGAGGAGG 730826
>seq768
Length=1243675
Score = 84.2 bits (92), Expect = 2e-11
Identities = 153/222 (69%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || || || |||||| | || ||||| |
Sbjct 1130922 ATGCAAATCTTCGTGAAGACGCTCACGGGGAAGAACATCACCCTTGAGGTGGACCCAAAC 1130863
Query 25059 GACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| |||||| ||| |||| || | || ||||| || || ||||| || ||
Sbjct 1130862 GACACGATCGAGAGCGTCA---AAGCTAAGATCCAG-GACAAGGAGGGCATTCCGCCGGA 1130807
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||| ||||| | ||||||||||| || || || || || | ||||| | | || ||
Sbjct 1130806 CCAGCAGCGTCTGATTTTTGCCGGGAAGCAGTTGGATGACGGGCGCACGCTCGCGGACTA 1130747
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216
||| || ||||| || || ||| | || || ||||| ||||
Sbjct 1130746 CAACATCCAAAAGGAGTCGACGATCCACTTGGTGCTGCGGCT 1130705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433321018273430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |