Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 358 7e-94
>seq1
Length=3593316
Score = 358 bits (396), Expect = 7e-94
Identities = 637/910 (70%), Gaps = 16/910 (2%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||||| |||||| ||||| |||| ||||||||| ||||||| || |||||
Sbjct 930130 CATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTC 930071
Query 92850 CAAAGATATCGAATTCACTAGTG--ATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|| ||||| | || | | |||||| | | ||||||| ||||||| ||
Sbjct 930070 TAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACA-AT 930012
Query 92908 C-AACTCGTACAATAATCTATCAGCTACAA-ATTCTATGTACTGAGACATCAAATCACAA 92965
| || || |||||| | ||| || |||| |||| || || | ||||| || | | |
Sbjct 930011 CTAATTCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCA 929953
Query 92966 TTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAAT-CTTTCTCGATTACAAC 93024
||||| || | | ||| |||| || ||||| ||||||| ||| || || |||
Sbjct 929952 TTCATACCGATCAATGATACTGGTAATGCATCGGT-AAGAAATTCTTGTTCAATATTAAC 929894
Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGAC-ATAATTGT 93083
|| || | | ||||| | | || || ||| | ||||| || ||
Sbjct 929893 AGCATCAATAATAATTTCAACAATTCGTTGTGATGATGGACGAT-TACGAATATGATGAA 929835
Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143
||| | || ||||| || |||||| ||||| || ||||| ||||| ||||| |
Sbjct 929834 ACAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAA 929775
Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203
| || | ||| || | || || ||||| || |||||||| |||| ||||| ||| |
Sbjct 929774 AGGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGG 929715
Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263
|||||||||| ||||| || || |||||||| | | |||||||||||| | | ||||
Sbjct 929714 AAAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAAT 929655
Query 93264 TA-CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322
| || || |||| || |||||| | |||||||||| | ||||||||| || ||
Sbjct 929654 CATCTTGTG-TCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGA-TTACG 929597
Query 93323 -ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
||||| || ||||| ||||| | || | ||| || || |||| || || |
Sbjct 929596 TATAGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATAA 929537
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
||||||||||| ||||| ||||| || || |||||||| ||||| || ||||| | ||
Sbjct 929536 TGAATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTGC 929477
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | || || || || || ||| | || | | ||||||||| || ||||||||
Sbjct 929476 TTCTGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCATC 929417
Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCA-TCATCTTTAAGCT 93560
||| |||||||||||||||| ||| || |||||||| ||| || ||||| |
Sbjct 929416 ACTTGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAA-TT 929358
Query 93561 TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTT 93620
||| ||||| ||||| | ||||| |||||||| || |||||||| |||||||
Sbjct 929357 TATTCCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTT 929298
Query 93621 CTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGAT 93680
| |||||||||||||| ||| || || ||||||||||||||||| | ||||||||||
Sbjct 929297 CAGCTTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAAACGAT 929238
Query 93681 TAGGGTTATC 93690
| || || ||
Sbjct 929237 TTGGATTTTC 929228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556851597875280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |