Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 1e-32
seq391 116 3e-21
seq558 82.4 6e-11
>seq1
Length=3593316
Score = 154 bits (170), Expect = 1e-32
Identities = 175/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|||||||||||||| | ||| || ||||| | || ||||| |||||||| || ||||||
Sbjct 1033252 ATACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCG 1033311
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||||| |||||| | |||||||||||| |||| | || || || || ||
Sbjct 1033312 GACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGT 1033371
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
|||||||||||||| || ||| ||| | |||| | | ||| | |||||| | | |||
Sbjct 1033372 GGAATGCCTTCTTTATCTTGAAT-TTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTC 1033430
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||| |||| || | ||||| || |||| |||||||| || || ||||||
Sbjct 1033431 GACTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATG 1033482
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||||| || ||| || | ||| | || |||||||||||||||||||||||
Sbjct 1032509 ATACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCC 1032568
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||||||| ||||| |||||| | || | ||| || ||||| ||
Sbjct 1032569 GACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGT 1032628
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||||||||| || || || | | ||||| ||| || | || |||
Sbjct 1032629 GGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCC 1032688
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || |||| |||||| ||||||||||||||
Sbjct 1032689 ACTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| |||| ||| || ||||||| || ||||||||||| ||||| |||||| |
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || ||| |||||| | |||||| || || |||| | |||||| || || || |||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||||||||| || ||| ||| | | ||| | || || | | ||| ||
Sbjct 1031720 ATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACT 1031779
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| ||| | ||||| ||||||| |||||||| ||||| |||||
Sbjct 1031780 TCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||||| | ||| || ||||||| || ||||||||||| || || |||||
Sbjct 1033024 ATTCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCC 1033083
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| |||||||||||||| |||| | || || || || ||
Sbjct 1033084 GACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGT 1033143
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| |||||||| || || || ||| | | ||| | ||||| | | ||||
Sbjct 1033144 GGAATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCG 1033203
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | |||||||| |||| ||||||||| ||||| |||||
Sbjct 1033204 ACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 122 bits (134), Expect = 7e-23
Identities = 167/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT-C 114211
||||| |||||||| | ||| || ||||| | || || |||||||| |||||||||| |
Sbjct 1032281 ATACCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCC 1032340
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
| | || |||||| |||||| | ||||||||| || |||| | ||| || ||||| ||
Sbjct 1032341 GATAAT-GTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGG 1032399
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
||||| || ||||| || ||| ||| || | | ||| | || || | | |||
Sbjct 1032400 TGGAATTCCCTCTTTATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTC 1032459
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
||||| | || | ||||| || |||| ||||| || ||||| |||||
Sbjct 1032460 AACGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || ||||||| || |||||||||||||| |||||||||
Sbjct 1031825 ATTCCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCG 1031884
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| |||||| | ||||||||||||| | || | ||| || || || ||
Sbjct 1031885 GATAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGT 1031944
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| || || |||||| ||||| | ||| | || || | | |||
Sbjct 1031945 GGAATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCG 1032004
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | |||||| || || || || || || ||||| |||||
Sbjct 1032005 ACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||||| ||||| | || ||||| ||||||||||||||||||
Sbjct 1032053 ATACCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCG 1032112
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| | |||||| | ||| || || || |||| | || || || || ||
Sbjct 1032113 GACAAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGG 1032172
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || |||||||| || || ||||| | ||| | || || | | |||
Sbjct 1032173 GGAATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCG 1032232
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| ||||| |||||||| || ||||| |||||
Sbjct 1032233 ACTTCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
>seq391
Length=841353
Score = 116 bits (128), Expect = 3e-21
Identities = 157/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229
||| || | ||| | || ||||| ||||||||||||||||| || || || |||||
Sbjct 250948 CAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCGCGAATC 251007
Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289
|||||||| || ||||| | || | |||||||| || || ||||| |||||||| ||
Sbjct 251008 GTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCTTTATC 251067
Query 114290 GGCAATCTTTTGTTTT--AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
||| ||| ||||| ||| ||||| ||| ||| | | || || || | | |
Sbjct 251068 CTGAAT-TTTCGTTTTCACGCT-TTCAATGGTATCGTTTGGCTCTACTTCGAGAGAAATA 251125
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || |||| ||||||||||||||| |||||
Sbjct 251126 TTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
||||| |||| ||| |||||||| || || ||||| || || ||| | |||||||||
Sbjct 251408 ACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTCT 251467
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
| |||||| ||||| | || | || ||||| || || ||||| ||||| || || |
Sbjct 251468 AATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGGAATTCCTTCCTTATCCTGA 251527
Query 114294 ATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
|| ||| ||||| | | ||||| ||||| |||| ||| || || | | | ||||
Sbjct 251528 AT-TTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTACCTCAAGCGAAATATTTTT 251586
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||||||||||| ||||||||
Sbjct 251587 ACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | |||| | ||||| |||| || |||||||| || || ||||| ||
Sbjct 251159 ATACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCT 251218
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| | ||||||||| | ||||| ||||| | || | ||||||||||| ||
Sbjct 251219 GACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGC 251278
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||||||||| ||| || |||| |||| |||||| ||| ||||
Sbjct 251279 GGAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCG 251338
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| | | |||| || || | || ||||||||||| || ||
Sbjct 251339 ACTTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|||||||| || || |||||||| || |||||||| ||| | ||| || || ||
Sbjct 730844 ACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTTGTCGTCT 730903
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
||||| |||||||| | || || | || || ||||| ||||| |||||||||||
Sbjct 730904 AGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCTTTGTCTTGG 730963
Query 114294 ATCTTTTGTTTTAGCTG--TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTT 114351
| ||||| ||| | || |||| ||||| | | ||| || |||| ||| | | |
Sbjct 730964 A--TTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAATGTTCT 731021
Query 114352 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || || | ||||| || |||||||||||
Sbjct 731022 TCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
>seq558
Length=611125
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
|||||| || |||| || || || || || || || ||||| ||||||||||| ||
Sbjct 303941 ACCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGC 303882
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || || || || || || || || |||| | ||||| |||||||| ||
Sbjct 303881 GAGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGG 303822
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTA-GCTGTTCAACGGTGTCGGTGGATTCGA 114333
|||||| |||||||| ||||| ||| | ||| || | |||||| | | || |
Sbjct 303821 AATGCCCTCTTTGTCCTGGATCTTAGCTTTGACGCT-CTCGATCGTGTCGTTTGGGTCCA 303763
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || | || | | ||||| || || || || ||||| ||||||||
Sbjct 303762 CTTCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCAT 303714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420127630847064
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