Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq558 149 1e-30
seq1 147 5e-30
seq768 116 9e-21
seq391 107 5e-18
>seq558
Length=611125
Score = 149 bits (164), Expect = 1e-30
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| |||| ||||| | ||||| ||| ||||| || || || ||||| |||
Sbjct 303940 CCGCCGCGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCG 303881
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||||||||| || | || || || || ||||||| ||||| || ||
Sbjct 303880 AGCGTGCGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGA 303821
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || ||||| |||||||| || ||||| ||| | || || | ||| | | || |||
Sbjct 303820 ATGCCCTCTTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACT 303761
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTC 288483
|||||||| || |||| || || || |||||||| ||||||||||| ||||| |||
Sbjct 303760 TCGAGCGTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTGCATCATGTTGTTC 303704
>seq1
Length=3593316
Score = 147 bits (162), Expect = 5e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || |||| | ||| | ||| | || |||||||||||| ||||| ||||
Sbjct 1031599 TCCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGA 1031658
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || ||||| ||||||||||| || ||||||| |||||| ||| |||
Sbjct 1031659 CAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGG 1031718
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| |||||||| || |||||||| ||||| || ||||| |||| ||| | ||| ||
Sbjct 1031719 AATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCAC 1031778
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| | ||||| || || ||||||| || || ||||| || ||||||
Sbjct 1031779 TTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 134 bits (148), Expect = 3e-26
Identities = 169/231 (73%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||| || | ||| | ||| ||||||||| ||||| || ||||
Sbjct 1031827 TCCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGA 1031886
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || ||||| |||||||| || ||||| |||| ||| || ||| |||
Sbjct 1031887 TAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGG 1031946
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT---TC 288422
|| ||||| ||||| || || || ||||| || ||||| || | ||| |||| ||
Sbjct 1031947 AATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATC---CGATGGCTC 1032003
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | |||||||| || || || || ||||||||||| || |||||
Sbjct 1032004 GACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 123 bits (136), Expect = 6e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || | | | ||| | ||| | ||| ||||||||| |||||||| || |
Sbjct 1033026 TCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGA 1033085
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || || ||||| | |||||| || || ||||||| || || ||| |||
Sbjct 1033086 CAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGG 1033145
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| |||||||||||||||||||| |||||||| ||||| |||| || | ||| ||
Sbjct 1033146 AATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGAC 1033205
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| | || || || || || |||| ||| || ||||| || |||||
Sbjct 1033206 TTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 114 bits (126), Expect = 3e-20
Identities = 143/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| || || || |||| | || | ||| ||||| ||||| ||||| || ||
Sbjct 1032091 TTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAA 1032150
Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398
||||| || || ||| |||||| ||||| ||||| ||||||||||| ||||| ||
Sbjct 1032151 GATCAATCGTTGCTGA---TCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCTTTTAC 1032207
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458
||||| || | ||| | || ||||| | || || || || ||||| ||||| ||
Sbjct 1032208 ATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTTTTACCGGTAAGAGTTTT 1032267
Query 288459 GACGAATATCTGCAT 288473
|||||| || |||||
Sbjct 1032268 GACGAAAATTTGCAT 1032282
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | || | ||||||||||| || ||||||||| || || || || |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || ||||| | ||||| || ||||| |||| ||| || || |||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||||||||| || |||||||| || || || ||||| || | ||| | ||| |||
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || || || || |||| ||| ||||| || ||||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||||||||| || || || | | || || || |||||||||||||| || || |||
Sbjct 1032320 TCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCTTCTAATTGTTTACCGGCAAAG 1032379
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| ||| || || ||| ||||| ||||||||||| ||||| || ||||| |||
Sbjct 1032380 ATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCCTGAATTTTTGCCTTCACATTT 1032439
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| | ||| || || | ||||| || || || |||| || || |||
Sbjct 1032440 TCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACG 1032499
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1032500 AAAATTTGCAT 1032510
Score = 109 bits (120), Expect = 1e-18
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| |||||||| |||| | || || || ||||| |||||||| || || ||
Sbjct 1033290 TTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAA 1033349
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||||| || || ||| ||| || ||||||||||| || ||||| ||||| || ||
Sbjct 1033350 GATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATT 1033409
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | || | ||| ||||| | ||||| || || || |||| || || ||
Sbjct 1033410 TTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTAC 1033469
Query 288462 GAATATCTGCATTAT 288476
||| || ||||| ||
Sbjct 1033470 GAAGATTTGCATGAT 1033484
>seq768
Length=1243675
Score = 116 bits (128), Expect = 9e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || ||||| ||||||||||| ||||| || || || || || || ||
Sbjct 1130732 TCCTTTTGGATGTTGTAGTCCGCGAGCGTGCGCCCGTCATCCAACTGCTTCCCGGCAAAA 1130791
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || || || || || || |||||||| || ||||| ||| |
Sbjct 1130792 ATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTGACGCTC 1130851
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| | | || || || || ||||| ||||||| || || ||||| |||
Sbjct 1130852 TCGATCGTGTCGTTTGGGTCCACCTCAAGGGTGATGTTCTTCCCCGTGAGCGTCTTCACG 1130911
Query 288463 AATATCTGCATTAT 288476
|| || ||||| ||
Sbjct 1130912 AAGATTTGCATCAT 1130925
>seq391
Length=841353
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||| |||||||| ||||| | | || | ||||||||||||||||| || ||
Sbjct 251425 TTCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAA 251484
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| | || |||||| | || |||||||| |||||||| ||||||| |||||| ||
Sbjct 251485 AATTAATCGTTGTTGATCAGGCGGAATTCCTTCCTTATCCTGAATTTTCGTTTTCACATT 251544
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| || | || | | |||||| || |||| || | || || || | || || ||
Sbjct 251545 TTCAATTGTGTCAGTGGGTTCTACCTCAAGCGAAATATTTTTACCTGTTAATGTTTTTAC 251604
Query 288462 GAATATCTGCAT 288473
|||||||||||
Sbjct 251605 AAATATCTGCAT 251616
Score = 95.1 bits (104), Expect = 3e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378
|| || | ||| ||||| || || || | ||||||||| | || || |||||||||
Sbjct 251006 TCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCTTTA 251065
Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438
||||| ||||||| ||||||| |||| || | |||| | | ||||||||||| | ||
Sbjct 251066 TCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGAAATA 251125
Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || |||| ||| || || || || |||||
Sbjct 251126 TTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Score = 93.3 bits (102), Expect = 1e-13
Identities = 151/216 (70%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320
||| || | |||||| ||| |||||| ||||| || ||||||| | ||||| |||
Sbjct 730840 AAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTTGTC 730899
Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTT 288377
|||| ||| || || || || || || | || ||| || ||| |||||||||||
Sbjct 730900 GTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGA---TCCGGGGGAATTCCTTCTTT 730956
Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437
|| |||||||| | ||| | | || |||| || | | ||| || || || || ||
Sbjct 730957 GTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAAT 731016
Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||| || | || || ||||| ||||||||
Sbjct 731017 GTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179634418866316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |