Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq335 217 1e-51 >seq335 Length=939964 Score = 217 bits (240), Expect = 1e-51 Identities = 994/1568 (63%), Gaps = 64/1568 (4%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || || ||||| ||||||||||| ||| | || |||| | || || || ||| Sbjct 178810 GCGACGCCGACGCTGTTCAACGCCGGGCTGAAGCGGCAACAGCTCTCCAGCTGCTTTCTG 178869 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || || | |||||| ||| || |||||||||| || ||||| || ||| Sbjct 178870 CTGCAGATGGCCGACGACTCGATCGAGGGCATTTTCGACACGCTGAAGGAGTGCGCGGTG 178929 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || ||||| || || |||||| || ||||| | | || || | | | Sbjct 178930 ATCAGCAAGTACGCTGGCGGGATCGGGCTCGCGATCCACAAGATCCGCGCGACGAACGCG 178989 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| || || || || | |||||| |||| || ||||| || || |||||| Sbjct 178990 TACATCGCGGGCACGAACGGGCGCAGCAACGGGATCGTGCCGATGCTGCGCGTGTTCAAC 179049 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | ||||||||||| |||||||| || || | | | || || |||||| |||| Sbjct 179050 GCGACCGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAAGGCGGCTTCGCGATCTAC 179109 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| |||||||| ||| | | |||||||| ||||| |||||||||||| Sbjct 179110 CTGGAGCCGTGGCACGCAGACATCTTCGAGTTCATCGAGCTGCGGCGCAACCACGGCAAC 179169 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | | | | ||||||||| | || | | ||| | || ||| Sbjct 179170 GAAGAGTTGCGCACGCGGGACCTCTTCCTGGGGCTGTACATCAACGACTTGTTCATGCGC 179229 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 ||||| || || || || |||||||| | |||||| | | || || ||| | Sbjct 179230 CGCGTGGACGAAGACGGCGTGTGGAGTCTGATGTGTCCCGCGCAGTCGCCGGGCTTGTTC 179289 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATC---GCAGGGCAAG 94428 || || || || || || || | |||| | || ||||| | |||| || Sbjct 179290 GAAGTCTGGGGCGCGGAGTTCGACGCGCTGTACACGCGCTACGAGGCCGAGCAGCGCTTC 179349 Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGG--GATCAGATCGTGGACGTACAGGTGG 94486 | || ||| || | || | ||| ||| | || || ||| || ||| | | Sbjct 179350 GTGCGGCAGG---TGAAGGCGCGCGCGCTCTGGACGGTC--ATTGTGAACACGCAGATCG 179404 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 ||||||| | || ||| | ||| ||||||| | |||| |||||| ||||||| | Sbjct 179405 AGACGGGCAATCCGTACTTGGTGTACAAGGACGCGTGCAACCGCAAGTCGAACCAGCGGA 179464 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 ||||||| ||| || |||||| |||||||| || | || |||| || || | | Sbjct 179465 ACCTCGGCACCATCCAGTCCTCGAACCTGTGCACGGAAGTGGTGCAGTACACGTCGCGCG 179524 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||||| || ||||| ||||| | || | ||| || | | |||| || | | Sbjct 179525 AGGAGATCGCGGTGTGCAACCTCGCGTCGCTGTCGCTGCCCGCGTACGTG---GACGTCG 179581 Query 94667 ACACGTCTACTGCTTCGTTCGATCT-GGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT- 94724 | | | | | ||||| | || ||| |||| | | ||||| | ||| || Sbjct 179582 AGAAG-CGGC-GCTTC-----AACTACGAGAAGCTGTTCGAGGTCGCG---AAGATCGTG 179631 Query 94725 --CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782 ||||||||||| || |||||| | ||||||| | | ||||| | | Sbjct 179632 ACGCAGAACCTGAACAACGTGATCGACGTGGGCTTCTACGTGACCGAGAAGGCGCGGCGC 179691 Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 |||||| ||| ||||| |||||||||||||| || || ||||||||||||||| | Sbjct 179692 AGCAACCTGCGGCACCGGCCGATCGGCATCGGCGTGCAAGGCTTCGCGGACGCGCTGCAG 179751 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902 || |||| ||||| | |||| ||| ||| | |||| |||||| ||||| Sbjct 179752 CTGCTGCGGCTGCCGTTCGACAGCCCCGAGGCGAACGAAGTGAACAAGAACATCTTCGAG 179811 Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962 | || || | ||| || ||| |||| | | || | ||| |||||| Sbjct 179812 ACGATCTACTTCGGCGCGGTGACCGCGAGCGTCGAGCTCGCGA---AGGAGCACGGGCCG 179868 Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGG--- 95019 ||| ||| || |||||| | | |||| || ||||||||| | ||| Sbjct 179869 TACGCGAGCTTCGAAGGCTCGCCCGCGAGCGAAGGCAAATTCCAGTTCGACTTGTGGAAC 179928 Query 95020 -------GGTGTGA--------------------AGCCCTCGGGTCTGTACGACTGGGAA 95052 || | || ||| |||||| ||| |||||||| Sbjct 179929 GAAGAACGGCGCGAGCGGAACTTGCGTGAGATTCAGCTCTCGGGCATGTGGGACTGGGAG 179988 Query 95053 GCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATG 95112 | || |||| | | |||| |||| || ||| ||||| || || || ||| Sbjct 179989 GAGCTGCGCGAGGCGATGGTCAAGTACGGGCTGCGCAACAGCCTGCTGGTCGCGCCGATG 180048 Query 95113 CCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCC 95172 || ||||| || || |||||||||| || ||| |||||||||||| || | ||| || Sbjct 180049 CCGACGGCGTCGACTTCGCAGATCCTCGGGAACTGCGAGTCGTTCGAGCCGTACACGTCG 180108 Query 95173 AACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTA 95232 ||||||| | | || |||||| ||| || ||| ||| ||||||||||| | | Sbjct 180109 AACGTGTTTACGCGCCGCGTGCTCAGCGGCGAGTTCTGCGTGCTCAACAAGCACTTGGTG 180168 Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC- 95291 | | || || || || ||||| || | | ||| | || || | ||||| Sbjct 180169 CTCGCGCTCTCGAAGCTCGGGCTGTGGTCGGAGGCGCTGAAGCAGCAGCT-CATCGCGCA 180227 Query 95292 CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGAC 95351 ||||||||| || ||| ||| | |||| ||| || | |||||||| | |||||| Sbjct 180228 CAACGGCTCGGTGCAGCTGATCGAGGAAATCCCGCAGCCGCTGAAGGCGCTGTTCAAGAC 180287 Query 95352 CGTGTGGGAGATCCCGCAGCGCGTGATAC-TCGACCACGCGGCCGCCCGCGGGCCCTTCA 95410 ||||||||| ||||||| | ||| ||||| ||| ||| |||| ||| |||| Sbjct 180288 GACCTGGGAGATCAAGCAGCGC-AGCTACATCGACATGTCGGTCGCGCGCGCGCCGTTCA 180346 Query 95411 TCTGCCAG 95418 |||||||| Sbjct 180347 TCTGCCAG 180354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494715024699120