Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq335 217 1e-51
>seq335
Length=939964
Score = 217 bits (240), Expect = 1e-51
Identities = 994/1568 (63%), Gaps = 64/1568 (4%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
|| || ||||| ||||||||||| ||| | || |||| | || || || |||
Sbjct 178810 GCGACGCCGACGCTGTTCAACGCCGGGCTGAAGCGGCAACAGCTCTCCAGCTGCTTTCTG 178869
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
|| || | |||||| ||| || |||||||||| || ||||| || |||
Sbjct 178870 CTGCAGATGGCCGACGACTCGATCGAGGGCATTTTCGACACGCTGAAGGAGTGCGCGGTG 178929
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
||| || ||||| || || |||||| || ||||| | | || || | | |
Sbjct 178930 ATCAGCAAGTACGCTGGCGGGATCGGGCTCGCGATCCACAAGATCCGCGCGACGAACGCG 178989
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|||||| || || || || | |||||| |||| || ||||| || || ||||||
Sbjct 178990 TACATCGCGGGCACGAACGGGCGCAGCAACGGGATCGTGCCGATGCTGCGCGTGTTCAAC 179049
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
| ||||||||||| |||||||| || || | | | || || |||||| ||||
Sbjct 179050 GCGACCGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAAGGCGGCTTCGCGATCTAC 179109
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| ||||| |||||||| ||| | | |||||||| ||||| ||||||||||||
Sbjct 179110 CTGGAGCCGTGGCACGCAGACATCTTCGAGTTCATCGAGCTGCGGCGCAACCACGGCAAC 179169
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | | | | ||||||||| | || | | ||| | || |||
Sbjct 179170 GAAGAGTTGCGCACGCGGGACCTCTTCCTGGGGCTGTACATCAACGACTTGTTCATGCGC 179229
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
||||| || || || || |||||||| | |||||| | | || || ||| |
Sbjct 179230 CGCGTGGACGAAGACGGCGTGTGGAGTCTGATGTGTCCCGCGCAGTCGCCGGGCTTGTTC 179289
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATC---GCAGGGCAAG 94428
|| || || || || || || | |||| | || ||||| | |||| ||
Sbjct 179290 GAAGTCTGGGGCGCGGAGTTCGACGCGCTGTACACGCGCTACGAGGCCGAGCAGCGCTTC 179349
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGG--GATCAGATCGTGGACGTACAGGTGG 94486
| || ||| || | || | ||| ||| | || || ||| || ||| | |
Sbjct 179350 GTGCGGCAGG---TGAAGGCGCGCGCGCTCTGGACGGTC--ATTGTGAACACGCAGATCG 179404
Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546
||||||| | || ||| | ||| ||||||| | |||| |||||| ||||||| |
Sbjct 179405 AGACGGGCAATCCGTACTTGGTGTACAAGGACGCGTGCAACCGCAAGTCGAACCAGCGGA 179464
Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606
||||||| ||| || |||||| |||||||| || | || |||| || || | |
Sbjct 179465 ACCTCGGCACCATCCAGTCCTCGAACCTGTGCACGGAAGTGGTGCAGTACACGTCGCGCG 179524
Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666
| ||||| || ||||| ||||| | || | ||| || | | |||| || | |
Sbjct 179525 AGGAGATCGCGGTGTGCAACCTCGCGTCGCTGTCGCTGCCCGCGTACGTG---GACGTCG 179581
Query 94667 ACACGTCTACTGCTTCGTTCGATCT-GGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT- 94724
| | | | | ||||| | || ||| |||| | | ||||| | ||| ||
Sbjct 179582 AGAAG-CGGC-GCTTC-----AACTACGAGAAGCTGTTCGAGGTCGCG---AAGATCGTG 179631
Query 94725 --CTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782
||||||||||| || |||||| | ||||||| | | ||||| | |
Sbjct 179632 ACGCAGAACCTGAACAACGTGATCGACGTGGGCTTCTACGTGACCGAGAAGGCGCGGCGC 179691
Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842
|||||| ||| ||||| |||||||||||||| || || ||||||||||||||| |
Sbjct 179692 AGCAACCTGCGGCACCGGCCGATCGGCATCGGCGTGCAAGGCTTCGCGGACGCGCTGCAG 179751
Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902
|| |||| ||||| | |||| ||| ||| | |||| |||||| |||||
Sbjct 179752 CTGCTGCGGCTGCCGTTCGACAGCCCCGAGGCGAACGAAGTGAACAAGAACATCTTCGAG 179811
Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962
| || || | ||| || ||| |||| | | || | ||| ||||||
Sbjct 179812 ACGATCTACTTCGGCGCGGTGACCGCGAGCGTCGAGCTCGCGA---AGGAGCACGGGCCG 179868
Query 94963 CACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGG--- 95019
||| ||| || |||||| | | |||| || ||||||||| | |||
Sbjct 179869 TACGCGAGCTTCGAAGGCTCGCCCGCGAGCGAAGGCAAATTCCAGTTCGACTTGTGGAAC 179928
Query 95020 -------GGTGTGA--------------------AGCCCTCGGGTCTGTACGACTGGGAA 95052
|| | || ||| |||||| ||| ||||||||
Sbjct 179929 GAAGAACGGCGCGAGCGGAACTTGCGTGAGATTCAGCTCTCGGGCATGTGGGACTGGGAG 179988
Query 95053 GCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATG 95112
| || |||| | | |||| |||| || ||| ||||| || || || |||
Sbjct 179989 GAGCTGCGCGAGGCGATGGTCAAGTACGGGCTGCGCAACAGCCTGCTGGTCGCGCCGATG 180048
Query 95113 CCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCC 95172
|| ||||| || || |||||||||| || ||| |||||||||||| || | ||| ||
Sbjct 180049 CCGACGGCGTCGACTTCGCAGATCCTCGGGAACTGCGAGTCGTTCGAGCCGTACACGTCG 180108
Query 95173 AACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTA 95232
||||||| | | || |||||| ||| || ||| ||| ||||||||||| | |
Sbjct 180109 AACGTGTTTACGCGCCGCGTGCTCAGCGGCGAGTTCTGCGTGCTCAACAAGCACTTGGTG 180168
Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC- 95291
| | || || || || ||||| || | | ||| | || || | |||||
Sbjct 180169 CTCGCGCTCTCGAAGCTCGGGCTGTGGTCGGAGGCGCTGAAGCAGCAGCT-CATCGCGCA 180227
Query 95292 CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGAC 95351
||||||||| || ||| ||| | |||| ||| || | |||||||| | ||||||
Sbjct 180228 CAACGGCTCGGTGCAGCTGATCGAGGAAATCCCGCAGCCGCTGAAGGCGCTGTTCAAGAC 180287
Query 95352 CGTGTGGGAGATCCCGCAGCGCGTGATAC-TCGACCACGCGGCCGCCCGCGGGCCCTTCA 95410
||||||||| ||||||| | ||| ||||| ||| ||| |||| ||| ||||
Sbjct 180288 GACCTGGGAGATCAAGCAGCGC-AGCTACATCGACATGTCGGTCGCGCGCGCGCCGTTCA 180346
Query 95411 TCTGCCAG 95418
||||||||
Sbjct 180347 TCTGCCAG 180354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494715024699120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |