Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 4e-32
seq391 116 3e-21
>seq1
Length=3593316
Score = 152 bits (168), Expect = 4e-32
Identities = 173/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || |||| || || | |||||| || || |||||||| ||||||||||| |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCC--G 1032569
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| ||| | ||||| | |||||||||||| | |||||||| || ||||| ||
Sbjct 1032570 ACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTG 1032629
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||||||||| ||||| ||||| || ||| |||| || ||||| ||| |
Sbjct 1032630 GAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCA 1032689
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || |||||||||||||| |||| |||||| |||||||| ||||||
Sbjct 1032690 CTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCATA 1032739
Score = 145 bits (160), Expect = 5e-30
Identities = 173/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | || || || ||||| | || || |||||||| ||||| |||||| |
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCG--G 1031657
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| ||| | ||||| |||||||| || || | ||||||||||| || || ||
Sbjct 1031658 ACAATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTG 1031717
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTAT-TTTCT 15126
|||| ||||| ||||| ||||| ||| ||| |||| |||||||| | || |||
Sbjct 1031718 GAATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATC-CGATGGTTCC 1031776
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| ||||||||||| |||| |||||||| |||||||||||
Sbjct 1031777 ACTTCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 131 bits (144), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022
|| || ||||| | || || |||||||| ||||||||||| || ||| || | |
Sbjct 1032299 AATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCC--GATAATGTACGACCAT 1032356
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
||||||||||||| || || | |||||||| || ||||| ||||||||| || || |
Sbjct 1032357 CTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTAT 1032416
Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142
| |||||| || ||| |||| || ||||| ||| |||||||| || ||||
Sbjct 1032417 CCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGG 1032476
Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||||| |||| ||||| || ||||||||||||
Sbjct 1032477 TTTTACCAGTCAATGTTTTCACGAAAATTTGCATA 1032511
Score = 129 bits (142), Expect = 4e-25
Identities = 170/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || || | || || ||||| | ||| || ||||||||||| || ||||| |
Sbjct 1033027 CCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCC--G 1033084
Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| ||| | ||||| | |||||| ||||| | ||||| || || || || ||
Sbjct 1033085 ACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTG 1033144
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATT-TTCT 15126
|||| ||||| || || ||||| ||| ||| |||| ||||| || | || |||
Sbjct 1033145 GAATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTC-CGATGGTTCG 1033203
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||||||||| || |||| ||||||||| ||||||||||||
Sbjct 1033204 ACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCATA 1033254
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | | |||||| ||||| | || || || ||||| ||||||||||||
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||| ||||| || || || | ||||| || || || || |||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||| || ||||| |||||| ||||||| |||| || ||||| || ||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACT 1032235
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || ||||| |||||||| || |||||||| || ||||||||||||
Sbjct 1032236 TCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCATA 1032283
Score = 123 bits (136), Expect = 2e-23
Identities = 158/213 (74%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025
|| ||||| | ||| || |||||||| || ||||||||| || || || | ||||
Sbjct 1031846 ACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCG--GATAAGGTACGGCCATCTT 1031903
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| |||||||| |||||| | |||||||| || || || |||||| |||||||| ||
Sbjct 1031904 CCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTT 1031963
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTT-TCTACGTCTAAGGTAATGGTT 15144
||| ||| ||||||| |||| || ||||| | || || || || || || || |||
Sbjct 1031964 GAATCTTGGCTTTTACATTTTCGATTGTATC-CGATGGCTCGACTTCCAAAGTGATCGTT 1032022
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||| || || || || || ||||||||||||
Sbjct 1032023 TTACCAGTTAGGGTCTTGACGAAAATTTGCATA 1032055
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || ||||| | || || || ||||| || || |||||| | | | | | |||
Sbjct 1033270 AATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCT 1033329
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| |||||||| ||||| | ||||| || || || || |||||| ||||| || ||
Sbjct 1033330 TCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCT 1033389
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATT-TTCTACGTCTAAGGTAATGGT 15143
||||||| ||| ||| |||| || || || | || ||| || || || || |||||
Sbjct 1033390 TGAATTTTGGCTTTAACATTTTCGATGGTGTC-CGATGGTTCGACTTCCAAAGTGATGGT 1033448
Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182
|||||| |||| |||||||| || |||||||| ||||
Sbjct 1033449 TTTACCAGTCAATGTTTTTACGAAGATTTGCATGATTGA 1033487
>seq391
Length=841353
Score = 116 bits (128), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| |||| ||| | || || | ||| | || || || ||||| ||||||||||| ||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATC--TG 250991
Query 15010 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| |||| || || | ||| || ||||| | || || |||||||| || |
Sbjct 250992 ACAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCG 251051
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||| || || |||||| |||| || |||| || |||||| | ||||
Sbjct 251052 GAATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTA 251111
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || | | ||| |||| ||||||| ||||||||||||||||||||||
Sbjct 251112 CTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCATA 251161
Score = 116 bits (128), Expect = 3e-21
Identities = 154/212 (73%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTT 15025
||||| || | || || ||||| || || ||||| || ||| || |||| | ||||
Sbjct 251408 ACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTC--TGACAAAGTTCTAGAATCTT 251465
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
|||||||||| ||||| | || || || ||||| || |||||||||||||| ||
Sbjct 251466 CTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGGAATTCCTTCCTTATCCT 251525
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
|||||| |||| ||| |||| || || || | |||||| || | | ||| |||
Sbjct 251526 GAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTACCTCAAGCGAAATATTTT 251585
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||||| | ||||||||||| || ||||||
Sbjct 251586 TACCTGTTAATGTTTTTACAAATATCTGCATA 251617
Score = 113 bits (124), Expect = 3e-20
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| | || | ||||| || | || || ||||| || || ||||| || ||
Sbjct 251162 CCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTC--TG 251219
Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| || |||| | |||||||| ||||| ||||| | || || ||||||||||| |
Sbjct 251220 ACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGCG 251279
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| ||||| ||||| |||||| | |||||| | || ||||| ||| | ||| |
Sbjct 251280 GAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCGA 251339
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || | || |||| ||||| | || |||||||||||||| |||
Sbjct 251340 CTTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTATA 251389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357386241744770
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