Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 129 7e-25 >seq1 Length=3593316 Score = 129 bits (142), Expect = 7e-25 Identities = 365/552 (66%), Gaps = 18/552 (3%) Strand=Plus/Minus Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123 ||||||||||||||| || || |||| || |||| ||||| ||| | || |||||| | Sbjct 3537664 CCACATATCAAACTGTAGAATGCCTTTAGATACTGGTGATCCTTCATAAGTTTCATATTG 3537605 Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 116183 || | | | || ||||| | |||| || | | | | | ||| ||||| ||||| Sbjct 3537604 ACCTTTTTCTTGGGCTAATTCACAACTCGTTTCTAATGATCCATAATAAATTGTTTCAAA 3537545 Query 116184 AATGCGAGCATTCATTGCCTT--GGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAAT 116240 ||| || ||| | || | || || || ||| || | || | ||| |||||| Sbjct 3537544 AATCTGAATATTGA--GCAATCGAGCTTCTTCACTATCGAATG-GATAACGCATCAAAAT 3537488 Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300 ||| |||| || | ||||| ||||||| || ||||| ||||| | | ||| || Sbjct 3537487 AAACGCATCTGCTAATCCTTGAACACCGATTCCCATTGGTCGATGACGAAGATTCGAACG 3537428 Query 116301 TCGAGCGGTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 116359 | |||| ||| || ||||| || || |||||||| | | ||||| || | Sbjct 3537427 TTGAGC-TTCTGGTACAGGATAGTAAGTCACGTCGATAACTTTGTCCAGATTACGAGTTA 3537369 Query 116360 CAACCTT-----TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414 ||||||| || |||||| | ||||| ||||||| | || | | | || Sbjct 3537368 CAACCTTGACAATG-GATTTC----AATTTTTCAAAATCAAAGATTCGTTTTTTTGGATC 3537314 Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 ||| | ||| | |||||||| || |||||||| || | ||||| ||| | Sbjct 3537313 AACAAATTTATTCAATGCGATTGAAGCTAGATTACAGACGGCTACTTCATCTTTAGATGA 3537254 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 || || | |||||| ||||| | ||| |||| || || || || | || | |||||| Sbjct 3537253 ATATTCCACAATTTCGGTACAAAGATTCGAACATTTGATTGTACCGAGATTTTGTTGATT 3537194 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 ||| ||| ||||| ||| ||||| | ||| ||||| || || || || |||| || Sbjct 3537193 TGATTTTCGATTACAATGATCTTTGTAAACCATGTATGGTGTTCCAGTTTCGATTTGTGA 3537134 Query 116595 CTTGAGAATAGC 116606 | |||||||| Sbjct 3537133 TTCAAGAATAGC 3537122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613497061793520