Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 7e-25
>seq1
Length=3593316
Score = 129 bits (142), Expect = 7e-25
Identities = 365/552 (66%), Gaps = 18/552 (3%)
Strand=Plus/Minus
Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123
||||||||||||||| || || |||| || |||| ||||| ||| | || |||||| |
Sbjct 3537664 CCACATATCAAACTGTAGAATGCCTTTAGATACTGGTGATCCTTCATAAGTTTCATATTG 3537605
Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 116183
|| | | | || ||||| | |||| || | | | | | ||| ||||| |||||
Sbjct 3537604 ACCTTTTTCTTGGGCTAATTCACAACTCGTTTCTAATGATCCATAATAAATTGTTTCAAA 3537545
Query 116184 AATGCGAGCATTCATTGCCTT--GGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAAT 116240
||| || ||| | || | || || || ||| || | || | ||| ||||||
Sbjct 3537544 AATCTGAATATTGA--GCAATCGAGCTTCTTCACTATCGAATG-GATAACGCATCAAAAT 3537488
Query 116241 AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTT 116300
||| |||| || | ||||| ||||||| || ||||| ||||| | | ||| ||
Sbjct 3537487 AAACGCATCTGCTAATCCTTGAACACCGATTCCCATTGGTCGATGACGAAGATTCGAACG 3537428
Query 116301 TCGAGCGGTCT-CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 116359
| |||| ||| || ||||| || || |||||||| | | ||||| || |
Sbjct 3537427 TTGAGC-TTCTGGTACAGGATAGTAAGTCACGTCGATAACTTTGTCCAGATTACGAGTTA 3537369
Query 116360 CAACCTT-----TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414
||||||| || |||||| | ||||| ||||||| | || | | | ||
Sbjct 3537368 CAACCTTGACAATG-GATTTC----AATTTTTCAAAATCAAAGATTCGTTTTTTTGGATC 3537314
Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474
||| | ||| | |||||||| || |||||||| || | ||||| ||| |
Sbjct 3537313 AACAAATTTATTCAATGCGATTGAAGCTAGATTACAGACGGCTACTTCATCTTTAGATGA 3537254
Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534
|| || | |||||| ||||| | ||| |||| || || || || | || | ||||||
Sbjct 3537253 ATATTCCACAATTTCGGTACAAAGATTCGAACATTTGATTGTACCGAGATTTTGTTGATT 3537194
Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594
||| ||| ||||| ||| ||||| | ||| ||||| || || || || |||| ||
Sbjct 3537193 TGATTTTCGATTACAATGATCTTTGTAAACCATGTATGGTGTTCCAGTTTCGATTTGTGA 3537134
Query 116595 CTTGAGAATAGC 116606
| ||||||||
Sbjct 3537133 TTCAAGAATAGC 3537122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613497061793520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |