Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq335 118 2e-21 >seq335 Length=939964 Score = 118 bits (130), Expect = 2e-21 Identities = 391/603 (65%), Gaps = 4/603 (1%) Strand=Plus/Minus Query 204933 GCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCA 204992 ||||||| ||||||||||| || | ||||||||||| || | |||| | || |||| | Sbjct 179461 GCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTACACCAAGTACGGATTGCCCGTCTCGA 179402 Query 204993 TCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATCC 205052 |||| | || |||| ||||| | |||| |||| ||| ||| |||| | | Sbjct 179401 TCTGCGTGTTCACAATGACCGTCCAGAGCGCGCGCGCCTTCACCTGCCGCACGAAGCGCT 179342 Query 205053 CTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCC 205112 | | |||||| ||||||||||| | || || | || | || || | || | Sbjct 179341 GCTCGGCCTCGTAGCGCGTGTACAGCGCGTCGAACTCCGCGCCCCAGACTTCGAACAAGC 179282 Query 205113 CTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAA 205172 | || | | ||||||||||||| ||||| || || | ||| | ||| | Sbjct 179281 CCGGCGACTGCGCGGGACACATCAGACTCCACACGCCGTCTTCGTCCACGCGGCGCATGA 179222 Query 205173 ACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAA 205232 ||| |||| |||| |||| || || || || || | | | | |||| || Sbjct 179221 ACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCGCGTGCGCAACTCTTCGTTGCCGT 179162 Query 205233 GGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACG 205291 |||| || || | || || | ||||| |||||||||||||| | | | Sbjct 179161 GGTTGCGCCGCAGCTCGATG-AACTCGAAGATGTCTGCGTGCCACGGCTCCAGGTAGATC 179103 Query 205292 GCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAA 205351 || | ||||| | |||| || |||||||| || ||| | |||||||||| Sbjct 179102 GCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAAC 179043 Query 205352 ACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAG-CC 205410 || |||||||||||||| | |||||| | ||||||||||| |||| || | | Sbjct 179042 ACGCGCAGCATCGGCACGATCCCGTTGCTGCGCCCGTTCGTGCCCGCGATGTACGCGTTC 178983 Query 205411 TTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGC 205470 || || | | ||| ||| || || |||||||||| ||||| |||| || Sbjct 178982 GTC-GCGCGGATCTTGTGGATCGCGAGCCCGATCCCGCCAGCGTACTTGCTGATCACCGC 178924 Query 205471 GCACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATA 205530 |||||| | ||| ||| | | ||||| |||| || ||||| |||| || |||| | Sbjct 178923 GCACTCCTTCAGCGTGTCGAAAATGCCCTCGATCGAGTCGTCGGCCATCTGCAGCAGAAA 178864 Query 205531 GCA 205533 ||| Sbjct 178863 GCA 178861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795142060060320