Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq335 118 2e-21
>seq335
Length=939964
Score = 118 bits (130), Expect = 2e-21
Identities = 391/603 (65%), Gaps = 4/603 (1%)
Strand=Plus/Minus
Query 204933 GCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCA 204992
||||||| ||||||||||| || | ||||||||||| || | |||| | || |||| |
Sbjct 179461 GCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTACACCAAGTACGGATTGCCCGTCTCGA 179402
Query 204993 TCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATCC 205052
|||| | || |||| ||||| | |||| |||| ||| ||| |||| | |
Sbjct 179401 TCTGCGTGTTCACAATGACCGTCCAGAGCGCGCGCGCCTTCACCTGCCGCACGAAGCGCT 179342
Query 205053 CTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCC 205112
| | |||||| ||||||||||| | || || | || | || || | || |
Sbjct 179341 GCTCGGCCTCGTAGCGCGTGTACAGCGCGTCGAACTCCGCGCCCCAGACTTCGAACAAGC 179282
Query 205113 CTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAA 205172
| || | | ||||||||||||| ||||| || || | ||| | ||| |
Sbjct 179281 CCGGCGACTGCGCGGGACACATCAGACTCCACACGCCGTCTTCGTCCACGCGGCGCATGA 179222
Query 205173 ACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAA 205232
||| |||| |||| |||| || || || || || | | | | |||| ||
Sbjct 179221 ACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCGCGTGCGCAACTCTTCGTTGCCGT 179162
Query 205233 GGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACG 205291
|||| || || | || || | ||||| |||||||||||||| | | |
Sbjct 179161 GGTTGCGCCGCAGCTCGATG-AACTCGAAGATGTCTGCGTGCCACGGCTCCAGGTAGATC 179103
Query 205292 GCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAA 205351
|| | ||||| | |||| || |||||||| || ||| | ||||||||||
Sbjct 179102 GCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAAC 179043
Query 205352 ACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAG-CC 205410
|| |||||||||||||| | |||||| | ||||||||||| |||| || | |
Sbjct 179042 ACGCGCAGCATCGGCACGATCCCGTTGCTGCGCCCGTTCGTGCCCGCGATGTACGCGTTC 178983
Query 205411 TTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGC 205470
|| || | | ||| ||| || || |||||||||| ||||| |||| ||
Sbjct 178982 GTC-GCGCGGATCTTGTGGATCGCGAGCCCGATCCCGCCAGCGTACTTGCTGATCACCGC 178924
Query 205471 GCACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATA 205530
|||||| | ||| ||| | | ||||| |||| || ||||| |||| || |||| |
Sbjct 178923 GCACTCCTTCAGCGTGTCGAAAATGCCCTCGATCGAGTCGTCGGCCATCTGCAGCAGAAA 178864
Query 205531 GCA 205533
|||
Sbjct 178863 GCA 178861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795142060060320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |