Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 1e-24
seq768 127 5e-24
seq558 109 1e-18
seq391 87.8 4e-12
>seq1
Length=3593316
Score = 129 bits (142), Expect = 1e-24
Identities = 147/195 (75%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
||||| |||||||| | |||||| || | |||||| ||||||||||||| |||||||||
Sbjct 1032086 GTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCCATCTTCCAATTGCTTTCCG 1032145
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TT 199551
|| ||||| | || ||||| || || |||||| ||| ||||| || ||| || ||
Sbjct 1032146 GCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTTGTCCTGGAT-TTTGGCTTT 1032204
Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611
|| ||||| || || | || || || ||||| || || || ||||| || |||||
Sbjct 1032205 TACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAATAGTTTTACCGGTAAGAGT 1032264
Query 199612 TTTCACAAAAATTTG 199626
||| || ||||||||
Sbjct 1032265 TTTGACGAAAATTTG 1032279
>seq768
Length=1243675
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | ||||| |||||||||||||||| ||||||||| || | ||
Sbjct 1130702 CGCAGCCGCAGCACCAAGTGGATCGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGCGTG 1130761
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || |||| |||||| ||||| || || ||||||||||||||||| ||| ||
Sbjct 1130762 CGCCCGTCATCCAACTGCTTCCCGGCAAAAATCAGACGCTGCTGGTCCGGCGGAATGCCC 1130821
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| || ||| |||| ||||| ||| || || || |
Sbjct 1130822 TCCTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACCTCAAGG 1130881
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| |||| |||||||| || ||||| || |||||
Sbjct 1130882 GTGATGTTCTTCCCCGTGAGCGTCTTCACGAAGATTTG 1130919
>seq558
Length=611125
Score = 109 bits (120), Expect = 1e-18
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| |||| ||| || | ||| | ||| ||||| || || | ||||||||| || | ||
Sbjct 303934 CGCAGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTG 303875
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||| || || |||||||| || || ||||| | |||||||||||||| ||| ||
Sbjct 303874 CGTCCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCC 303815
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
||| ||||| ||||| || ||| |||| ||||| ||| || || || | |
Sbjct 303814 TCTTTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACTTCGAGC 303755
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||| |||||||| || || ||||| || ||
Sbjct 303754 GTTATGTTCTTGCCCGTGAGTGTCTTGACAAATATCTG 303717
>seq391
Length=841353
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480
|| || || | ||| || |||||||| | |||||| || | ||| |||| ||| ||
Sbjct 250952 ACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCGCGAATCGTCA 251011
Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540
|| |||||||| || || || | ||||| || || || ||| |||||| ||||||
Sbjct 251012 AGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCTTTATCCTGA 251071
Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600
|| || |||||| ||| | ||| || ||| ||||| || | | || | ||
Sbjct 251072 ATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGAAATATTTTTT 251131
Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || | |||||| |||||||||||
Sbjct 251132 CCTGTCAAAGTTTTTACAAAAATTTG 251157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178901631278574
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |