Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 1e-31
seq391 95.1 8e-15
>seq1
Length=3593316
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | ||||| |||||||||||| || ||| ||||| ||||||||||||| |
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| || |||| ||||||||||| || |||| || || || |||||||| | ||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||| || ||||| ||||| | | | ||||| | ||| ||
Sbjct 1033375 ATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACT 1033434
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|||||||| || |||||||| || || |||||||||||||| ||||||
Sbjct 1033435 TCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATG 1033482
Score = 138 bits (152), Expect = 8e-28
Identities = 162/217 (75%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|||| ||||||||| || || ||||||||| || |||||||||| ||| || ||
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCA 1031671
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| ||||||||||| ||| |||| || |||||||||||||| | || | |||||||||
Sbjct 1031672 TCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTG 1031731
Query 39625 TCGCATATTTTTTGTTT--AATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAA 39682
|| |||||| ||| || ||| || || || | |||||| ||||| || |
Sbjct 1031732 TCTTGGATTTTTGCTTTGACATTTTCGATA--GTATCCGATGGTTCCACTTCCAAGGTGA 1031789
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||||||| || || ||||||||||| || |||||
Sbjct 1031790 TGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 132 bits (146), Expect = 3e-26
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || ||||||| ||||||||| || ||| ||||||||||||||||||||| | |
Sbjct 1033027 CCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGAC 1033086
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||| || | |||||| || |||| || || || |||||||| | ||
Sbjct 1033087 AATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033146
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTT--AATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| |||||||| || ||||| ||| || ||| || ||||| | ||| |
Sbjct 1033147 ATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATA--GTGTCCGATGGTTCGA 1033204
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| ||||||||||| ||||| || || |||||||||||||| || |||||
Sbjct 1033205 CTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 107 bits (118), Expect = 1e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571
|| || ||||||||||||| ||| |||||||||||| ||| | || ||| |||||
Sbjct 603717 ATATTGCCTAAATCACCAACATGACGTTCTTCATCACTAGGTGCACCATGTGTTTTATTC 603658
Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATG 42630
|| |||||| |||| |||||||||||||||| ||||| || | || |||||||||||
Sbjct 603657 AATGGATTATAATGAGCACCAGCCGATGTACAACCATTTGTATTGTCACCAAATTCATG 603599
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| | ||||||||||| || ||| ||||| || || ||||||| |
Sbjct 1032056 CCACCACGGAGACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGAC 1032115
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | | |||| |||||||| || ||| |||| || || || |||||||| | |||
Sbjct 1032116 AAAGTTCTTCCATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGA 1032175
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| || |||||||| ||||| ||| | | | | || || | || ||
Sbjct 1032176 ATTCCCTCTTTGTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACT 1032235
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| |||||||| || | |||||| ||||| || |||||
Sbjct 1032236 TCCAATGTAATAGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 102 bits (112), Expect = 6e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| || |||||||| || ||| ||||||||| ||||| |||||||
Sbjct 1031828 CCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGAT 1031887
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||| ||||||||||| || | ||||| ||||| |||||||| | ||
Sbjct 1031888 AAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGA 1031947
Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||||| || || | || || | || || ||| | ||| || | || |
Sbjct 1031948 ATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCG--ATTGTATCCGATGGCTCGA 1032005
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||||||| || |||||||| |||| || || ||||| || |||||
Sbjct 1032006 CTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 100 bits (110), Expect = 2e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| ||||||||||||||| |||||||| || || ||||| |
Sbjct 1032284 CCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCCGAT 1032343
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||| || |||||||| ||| |||| || ||||| ||||| || | ||
Sbjct 1032344 AATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGTGGA 1032403
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669
| || ||||| || | | |||||| || | || ||| | ||| || | |||
Sbjct 1032404 ATTCCCTCTTTATC-CTGAATTTTTGCCTTCACATTTTCG--ATTGTATCAGATGGTTCA 1032460
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || || |||||||| || || ||||| ||||| || |||||
Sbjct 1032461 ACGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || || |||| ||| | ||| | || ||||||||| || || ||||| | |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||| || | ||||| || | ||||| ||||| ||||| || | ||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| ||||| || | | | | || || | | ||||||
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| ||||| |||||||| || |||||||| || || ||||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
>seq391
Length=841353
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| | ||| || || ||||| | ||| |||||| || || || || ||||
Sbjct 730826 CCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGAT 730885
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| ||| | ||||| | ||| || || ||||||| | | |||||||||| |||
Sbjct 730886 AAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGA 730945
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| ||||| ||| || | | | | ||||| ||||||
Sbjct 730946 ATTCCTTCTTTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCACC 731005
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| ||||| | || || ||||| ||||| ||||| ||||||||
Sbjct 731006 TCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/233 (70%), Gaps = 12/233 (5%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| ||| |||| |||| ||||||||| ||| ||||| || || ||||| | |
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| || |||||| | ||| || || |||||||||| ||||| ||||| | ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCT---ACTGTGTCTGCGCTT--- 39666
| |||||||| || | | |||| |||| || |||| | || || | || ||
Sbjct 251054 ATCCCTTCTTTATC-CTGAATTTTCGTTT--TCA-CGCTTTCAATG-GTAT-CGTTTGGC 251107
Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || | || ||| |||| || || ||||||||||| || || |||||
Sbjct 251108 TCTACTTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347364003224426
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |