Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq335 196 5e-45
seq768 154 1e-32
seq558 116 4e-21
seq1 102 8e-17
seq391 95.1 1e-14
>seq335
Length=939964
Score = 196 bits (216), Expect = 5e-45
Identities = 368/524 (70%), Gaps = 18/524 (3%)
Strand=Plus/Minus
Query 132910 TGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCG 132969
|||| ||| ||||| | || || ||||||||||||||| | | ||||||| ||||||
Sbjct 900291 TGCATGCCTTCGTCGCGCGAGATCAGTTCGTTGCTGAAACTGAGCCCGGGCAGCAGGCCG 900232
Query 132970 CGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA-AAGAAGACGCCCTCGACGGC 133028
|| || |||||||| || || ||| | |||| ||| || |||| ||| ||||| ||
Sbjct 900231 CGCTTCTTGAGCCAGAAGATCGCG-CAAAACGAGCCGCTGAACAAGATGCCTTCGACCGC 900173
Query 133029 CGCGAAA-GCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCG 133087
|| ||| || | |||||| || ||| || | ||| ||| |||||| | ||
Sbjct 900172 -GCAAAACGCGAGCAGGCGTTCCGCGAGCGAG--TTCGAGCCTGT-GATCCACTTGACCG 900117
Query 133088 CCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT-TCGATGGCGTTCAACAAACGGAGT 133146
|||| || ||||| |||||| ||||| ||| ||||| ||| || ||| || ||
Sbjct 900116 CCCACTCCGCCTTGCGTTTGACCGCCGGCA-CGTGCTCGATTGCGCGCAGCAACCGCAGC 900058
Query 133147 TTCTCTTCCGA--GGAACGC-ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGT 133203
|| || || | | ||| | |||||||||||| || ||| | ||||||||
Sbjct 900057 TTTTCGTCGGCCTGCTGCGCGAGGTAGGTGTCGATCAGCAAGCTGTACGTCTCCGAGTGG 899998
Query 133204 ACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCT 133263
| ||| ||||| || | || || ||||||| || | || || ||||| |||
Sbjct 899997 ATGTTTTCCATCGCAACCTGGAACGCGTAAAACTCGCGGACAGCGGGCAGCTGCATTTC- 899939
Query 133264 TGAGCGAAACGCTC--GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGG 133321
|| | ||| || | | ||||| ||| |||||||||||||| || |||||||| |
Sbjct 899938 -GACCAAAAAGCGGCTGGCGAGATTCTCGAGCACGATGCCGTCGCTCGCCGCGAAAAACG 899880
Query 133322 CCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC-TCCCAGTCGCGCGTG 133380
| ||||||||||||||||| || ||||| ||| ||| ||||| ||||||||| | |
Sbjct 899879 CGAGCACGTGCTTGATGAAGTGCCGCTCACCGTCCTTC-AGCGCGTCCCAGTCGTCCAAG 899821
Query 133381 TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424
|| |||||||| | |||||| |||||||||| || || ||
Sbjct 899820 TCGGCAGACAGGTCAATTTCCTCGGCGGTCCAAAAGGAGGCTTC 899777
>seq768
Length=1243675
Score = 154 bits (170), Expect = 1e-32
Identities = 175/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||||||||| || | ||||||| | || || || | | |
Sbjct 1130922 ATGCAAATCTTCGTGAAGACGCTCACGGGGAAGAACATCACCCTTGAGGTGGACCCAAAC 1130863
Query 38304 GACAGCGTGCAAACGCTT-AAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | || | |||| || |||| ||||| ||||| ||||| | |||||
Sbjct 1130862 GACA-CGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCA 1130804
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || |||| || || || ||| |||| |||| |||||| ||| ||||||||
Sbjct 1130803 GCAGCGTCTGATTTTTGCCGGGAAGCAGTTGGATGACGGGCGCACGCTCGCGGACTACAA 1130744
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474
|||||||||||| ||||| | || ||||||||||| || | |||||| ||
Sbjct 1130743 CATCCAAAAGGAGTCGACGATCCACTTGGTGCTGCGGCTGCGTGGCGGCGGC 1130692
>seq558
Length=611125
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| ||||| || || || ||||||||||| | ||| || |||| || || | | |
Sbjct 303714 ATGCAGATATTTGTCAAGACACTCACGGGCAAGAACATAACGCTCGAAGTGGACCCAAAC 303773
Query 38304 GACAGCGTGCAAACGC-TTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | || | |||| || |||| ||||||||||| ||||| | |||||
Sbjct 303774 GACA-CGATCGAGAGCGTCAAAGCTAAGATCCAGGACAAAGAGGGCATTCCGCCGGACCA 303832
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||| || ||||| ||||||| ||||| ||| ||||||||
Sbjct 303833 GCAGCGCTTGATCTTTGCGGGGAAGCAGCTCGACGACGGACGCACGCTCGCGGACTACAA 303892
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || || || | || | || ||||| ||||| || | |||||
Sbjct 303893 CATTCAGAAAGAGTCCACTATTCACTTGGTACTGCGACTGCGCGGCGG 303940
>seq1
Length=3593316
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||||||||| | || || |||||||||||| | || || || | |
Sbjct 1031827 AATGCAAATTTTCGTAAAAACATTGACCGGTAAAACCATCACCTTGGAAGTGGAACCATC 1031768
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | ||| | |||| |||||||| |||||||| || ||||| | || ||
Sbjct 1031767 GGATACTATCGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGTATTCCACCAGATCA 1031708
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | || || ||||| |||| || | || || | ||| || ||
Sbjct 1031707 GCAGCGTTTGATCTTTGCCGGAAAACAATTGGAAGATGGTCGAACATTGTCCGATTATAA 1031648
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||| |||| | |||||||| ||||
Sbjct 1031647 CATCCAAAAAGAATCGACATTACATTTGGTATTGCG 1031612
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| || || || ||||| || || | || |||||| | |
Sbjct 1032282 ATGCAAATTTTCGTCAAAACTCTTACCGGTAAAACTATTACATTGGAAGTCGAGCCATCT 1032223
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | ||| | |||| ||||||| |||||||||||||||||| | || ||
Sbjct 1032222 GATACGATCGAAAATGTAAAAGCCAAAATCCAGGACAAAGAGGGAATTCCCCCAGATCAG 1032163
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || || || |||| || | | || | ||| ||||||
Sbjct 1032162 CAACGATTGATCTTTGCCGGAAAGCAATTGGAAGATGGAAGAACTTTGTCCGATTACAAC 1032103
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
|| ||||||||| |||| ||||||||||
Sbjct 1032102 ATTCAAAAGGAATCGACATTGCATTTGGT 1032074
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||||||||| | || || ||||||||||| | || ||||| | |
Sbjct 1033481 ATGCAAATCTTCGTAAAAACATTGACTGGTAAAACCATCACTTTGGAAGTCGAACCATCG 1033422
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| |||||| ||||| | || ||||| || ||||| | || ||
Sbjct 1033421 GACACCATCGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGCATTCCACCAGATCAG 1033362
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || ||||| |||| || | || || | ||| || ||
Sbjct 1033361 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTGTCCGATTATAAT 1033302
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| ||||||||| | || |||||||||| ||||| | | |||||
Sbjct 1033301 ATTCAAAAGGAATCAACATTGCATTTGGTATTGCGTCTACGTGGCGG 1033255
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| | || || |||||||| || | || || || || |
Sbjct 1032738 ATGCAGATTTTTGTCAAAACTTTGACTGGTAAAACCATTACATTGGAAGTGGAACCCTCG 1032679
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | ||| | || | ||||||| |||||||| |||||||| | |||||
Sbjct 1032678 GATACCATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGAATTCCACCAGACCAG 1032619
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| ||| ||||||||||| || || | || || | || ||||||
Sbjct 1032618 CAACGTTTGATTTTCGCTGGCAAACAGCTTGAAGATGGCCGAACATTGTCGGATTACAAC 1032559
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| ||||| ||| |||| || ||| | || |||| ||
Sbjct 1032558 ATTCAAAAAGAATCGACACTTCATCTCGTATTGCGATT 1032521
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || ||||||||||| | ||||| || | |
Sbjct 1032510 ATGCAAATTTTCGTGAAAACATTGACTGGTAAAACCATCACATTAGACGTTGAACCATCT 1032451
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | ||| | || | |||||| | || |||||||||||||| | |||||
Sbjct 1032450 GATACAATCGAAAATGTGAAGGCAAAAATTCAGGATAAAGAGGGAATTCCACCAGACCAG 1032391
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || ||||| | || || | || || | || ||||||
Sbjct 1032390 CAACGTTTGATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACATTATCGGATTACAAC 1032331
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||||| || | || |||||||||| |||||
Sbjct 1032330 ATCCAAAAAGAGTCAACTTTGCATTTGGTATTGCGT 1032295
>seq391
Length=841353
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| | || || || | ||| ||| | || || || | |
Sbjct 731052 ATGCAGATTTTCGTGAAAACATTAACAGGGAAGAACATTACCCTGGAGGTGGAACCAAAT 730993
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | ||| ||||||| |||||||| ||||||||| | || ||
Sbjct 730992 GACACTATTGAGTCCATCAAAACCAAAATCCAAGACAAAGAAGGAATTCCCCCGGATCAG 730933
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| | || |||| || || || || || |||||| | ||||| | ||||||||||
Sbjct 730932 CAAAGACTTATTTTTGCTGGTAAGCAACTAGACGACAACCGCACTTTATCCGACTACAAC 730873
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| || ||| | || | ||||| ||||| ||| | ||||| ||
Sbjct 730872 ATCCAGAAAGAATCCACAATTCATTTAGTGCTTCGTCTTAGAGGAGG 730826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500164534644480
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