Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq569 194 2e-44
seq1212 111 2e-19
seq768 100 4e-16
>seq569
Length=351751
Score = 194 bits (214), Expect = 2e-44
Identities = 464/695 (67%), Gaps = 10/695 (1%)
Strand=Plus/Plus
Query 112299 CAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 112358
|||| || || ||||| ||||||||| | |||||||| ||||| | || |||
Sbjct 123858 CAAATTGAAACCGGTACTCCATATATGTTATACAAAGATCATTGTAATCGTAAATCAAAT 123917
Query 112359 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACA 112418
||| | ||| | ||| || || |||| || || ||||||||||| | |||| | ||
Sbjct 123918 CAACAAAATCTTGGTACAATTAAATGTTCAAATCTTTGTACAGAAATTGTTGAATATTCA 123977
Query 112419 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 112478
|||||| ||| || ||||| | ||||| || | | || | ||| |||
Sbjct 123978 TCACCAGATGAAGTGGCCGTATGTAATTTAGCATCGATTTCATTACCACGTTTTGTTGAT 124037
Query 112479 CCAGAGACAAAGACA-TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAA 112537
| | | || | || ||||||||||||||||| | || || ||| | |||||
Sbjct 124038 CAAAA-ACTCGGTCAATTTGATTATGAAAAACTTAAAAAAATTGTTAAAGTAATGACAAA 124096
Query 112538 AAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATC 112594
||| |||||| | |||||||| | |||| ||| || | ||||| | | ||
Sbjct 124097 AAATTTAAACAAAATTATTGATGGTAATTATTATCCATTACCGGAGACAAGACTT---TC 124153
Query 112595 TAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCT 112654
||| | | || || || ||||| || ||||| |||||| | || |||| ||||| |||
Sbjct 124154 AAATTTACGTCATCGACCTATTGGACTTGGTGTACAAGGTTTAGCCGATGCATTCAGTCT 124213
Query 112655 TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGAC 112714
| || | ||| ||| ||||| || |||| ||| | |||||||| ||
Sbjct 124214 ATTACGTTATCCATATGAAAGTTTGGAAGCAAAAAAAATGAATATCCAAATATTTGAAAC 124273
Query 112715 AATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGA 112774
||| ||| | | || | || || |||| || || ||||| |||||||||||||
Sbjct 124274 AATTTATTATGGTGCATTGGAAGCAAGTTGTGAATTAGCAGAACAATATGGTCCATATGA 124333
Query 112775 AACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA 112834
||| | | | || || |||| ||| |||| | || |||| |||||||||| | || |
Sbjct 124334 AACTTATCAAGGATCACCAGTATCAAAAGGTATTCTACAATATGATATGTGGAATCGT-A 124392
Query 112835 GACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTC 112893
||||| | || | | ||| | | || ||| || | | ||| |||
Sbjct 124393 CACCAACCGATCTTTGGAATTGGTCTGAATTGAAAGAAAAAATTTCCAAATATGGTATTC 124452
Query 112894 GTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 112953
| || ||| | ||| | ||||||||||||||||| || ||||||||||| | |||||||
Sbjct 124453 GAAATAGTTTATTGGTTGCACCAATGCCAACAGCATCAACCGCACAAATTCTTGGTAATA 124512
Query 112954 ATGAATGCTTTGAACCCTACACGACGAACATCTAT 112988
|||||| |||||||| || || | || ||||||
Sbjct 124513 ATGAATCATTTGAACCATATACATCAAATATCTAT 124547
>seq1212
Length=1133891
Score = 111 bits (122), Expect = 2e-19
Identities = 269/405 (66%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
|||||||| ||||| || | || | || | |||||||||||| || ||||| || |||
Sbjct 869870 CGATCAAAACGACCAGGCCTTAGCAATGCTTTATCAAGGATATCTACACGATTAGTAGCG 869929
Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004
|| | ||||||| || | ||| ||||||||||| || || | || ||
Sbjct 869930 GCTAACACAACAACGTTTGAAGCCGTATTGAAACCATCCATTTCGACTAATAATTGATTT 869989
Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064
| || | |||| ||||| || | |||| || ||| |||| ||| ||
Sbjct 869990 AATGTGTTTTCCTGTTCACTATGACCACCTATACTACGGCCACCACGTTTACGTCCAACA 870049
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124
||||| || |||||||| || | |||||||| ||||| || || | | |||| | |
Sbjct 870050 GCATCGATTTCATCAATAAATAAAATGCATGGAGCATTTTTACGTGCCATTGCAAACATA 870109
Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183
|| || ||||| | || |||||||||||||| || | ||| | | | || |||
Sbjct 870110 TCTCGAACACGTGAAGGACCAACACCAACAAACATTTCTAGAAACTCGGAACCAGATACA 870169
Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243
| |||||| || || |||| |||||| || | ||| ||| | | ||| || || ||
Sbjct 870170 GT-GATGAAAGGCACTTTAGCTTCACCGGCTGTTGCTTTGGCCAACAAAGTTTTGCCAGT 870228
Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||| || || | || || || ||| |||||| || || ||
Sbjct 870229 ACCAGGTGGTCCAGTTAGAAGTGCGCCTTTTGGAATTTTAGCACC 870273
Score = 100 bits (110), Expect = 4e-16
Identities = 264/397 (66%), Gaps = 6/397 (2%)
Strand=Plus/Plus
Query 13597 TCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTT-AAGGAGTCACCACAAAACGAG 13655
|||||||||| | | ||||| ||| |||||| || ||| ||| ||| ||| ||
Sbjct 1007892 TCTATCAAGCAAGTACTTCAGAATTGTATGGTAAAGTACAAGAAGT-ACCGCAACGTGAA 1007950
Query 13656 GAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTC 13715
||||| || || ||||| || ||||| || |||| || ||||| |
Sbjct 1007951 ACAACACCATTTTATCCACGATCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATT 1008010
Query 13716 GTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCAT 13775
|| ||||| || || |||| | | ||||||| | || || || ||||| |||
Sbjct 1008011 GTTGTCAATTATCGTGAAGCTTATGAAATGTTTGCCGTCAATGGTATTCTATTCAATCAT 1008070
Query 13776 GAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CGAGG-GTATCAAAC 13833
|||||||| ||||| |||| | ||||| || |||||||| || || || |||
Sbjct 1008071 GAATCACCTAGACGTGGTGAAACATTTGTCACACGTAAGATTACACGTGGTGTGGCAA-- 1008128
Query 13834 AAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATT 13893
|||| | | | | || ||||| ||||||||||| | | | | ||||||
Sbjct 1008129 AAATTGTTCTTAATCGACAAGAATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATT 1008188
Query 13894 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 13953
|||| || || || ||||||||||| |||||| | ||| | |||||||| | | |
Sbjct 1008189 GGGGCCATGCACGTGATTATGTTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGG 1008248
Query 13954 ACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGT 13990
| || | ||| | ||||| ||||| | ||||||||
Sbjct 1008249 AAGATTTTGTCATTGCAACCGGTGAAGCACATTCAGT 1008285
>seq768
Length=1243675
Score = 100 bits (110), Expect = 4e-16
Identities = 326/499 (65%), Gaps = 17/499 (3%)
Strand=Plus/Plus
Query 175839 AACCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGA 175898
||||||| ||||| || || | ||||||||||| | |||| | |||| |||||
Sbjct 748570 AACCCGTGCCGATGCCTTCCGCGCCGTTCACGAGCAGTTGCGGGATTACGGGCACGTAGA 748629
Query 175899 AGTCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCT--CT 175956
| | |||||| ||||| ||||| | |||| || | || || ||| ||
Sbjct 748630 ACTTTGGCTCGATGGGCACGTTGTCGTCGTTTTGGTAGTCCAGCAGCGGCTCGTCTTCCT 748689
Query 175957 --CGGATCAAAGATCTTTCGGGCATCTTTTGTGAGCTTTGTAAAGATATACCTCGTTTGA 176014
|||| || || | ||| | | || | ||||| || |||||||| | |||
Sbjct 748690 GCCGGAACAT-GAAC---CGGCAAACGTTCGACAGCTTCGTGAAGATATAGCGCGTCGCG 748745
Query 176015 GACGCATCCTTACCACCCA---TGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGA 176071
||||| || || ||| || ||| | ||||||||||| ||||||||||| ||
Sbjct 748746 GACGCGTCGCGCCCGCCCTCTTTGCGAC---TGCCAAACTGACCGCACGGCTCAAGCAGG 748802
Query 176072 TTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAG 176131
|| | ||||| | || | | | | | ||||| || || | ||| | ||| | ||
Sbjct 748803 TTCAGGTTGTTCGTTCCGACGAACTGCTGCGCCATGTTCACGACCGTCTGCGCAATCGAT 748862
Query 176132 ACTTCACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTC 176191
|||| ||||||||||| || |||||||| | || ||||||||||| |||
Sbjct 748863 TCTTCGCCGTGGTGGTAGCTGCTGACGTCTGCGACGTAGCTTGCGAACTGCGCCACCTTC 748922
Query 176192 ATCTC--ATC-CTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGC 176248
|| || | | | ||| ||||| | ||| |||||| || ||||| |||| |||
Sbjct 748923 ATTTCCGAGCGCACGAGGTTCTTTTTGAACGCGCCGTACAGCACTTTGCGCTGCGCCGGC 748982
Query 176249 TTGAGACCATCCGCCATGTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACG 176308
|| || || ||| |||||| | || || |||| || ||| | ||| || |||
Sbjct 748983 TTCAGCCCGTCCACCATGTTCGGAATCGAGCGCTGCACGTCGTACCGACTAAACAGCACG 749042
Query 176309 AGGTCCTTGTGTACAAAGT 176327
|| ||||||| | |||||
Sbjct 749043 AGCTCCTTGTTGATAAAGT 749061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620732142231840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |