Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq569 156 5e-33
seq1212 116 4e-21
seq768 84.2 3e-11
>seq569
Length=351751
Score = 156 bits (172), Expect = 5e-33
Identities = 425/641 (66%), Gaps = 16/641 (2%)
Strand=Plus/Minus
Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993
|||||| || | || || |||||||| ||||||||||||| | ||||||||||| ||
Sbjct 124547 ATAGATATTTGATGTATATGGTTCAAATGATTCATTATTACCAAGAATTTGTGCGGTTGA 124488
Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053
||||||||||||||||| | ||| | ||| || |||| ||| | || || |||
Sbjct 124487 TGCTGTTGGCATTGGTGCAACCAATAAACTATTTCGAATACCATATTTGGAAATTTTTTC 124428
Query 106054 CTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGA 106111
|| | || ||| | | || | | ||||| | || | |||||||||| ||||
Sbjct 124427 TTTCAATTCAGACCAATTCCAAAGATCGG-TTGGTGT-ACGATTCCACATATCATATTGT 124370
Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171
|| | |||| || || || || | | | || ||||| | ||| | ||| ||
Sbjct 124369 AGAATACCTTTTGATACTGGTGATCCTTGATAAGTTTCATATGGACCATATTGTTCTGCT 124310
Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231
|||||||| || || |||| | | | ||| || |||||||| || | ||||||
Sbjct 124309 AATTCACAACTTGCTTCCAATGCACCATAATAAATTGTTTCAAATATTTGGATATTCATT 124250
Query 106232 TCCTTGGCTTC--ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289
| || ||||| | || ||| ||| || || | | | | ||| |||| || | ||
Sbjct 124249 TTTTTTGCTTCCAAACTT--TCATATGGATAACGTAATAGACTGAATGCATCGGCTAAAC 124192
Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---A 106346
|||| ||||| | |||||||||| || || | ||| || || | |||| |
Sbjct 124191 CTTGTACACCAAGTCCAATAGGTCGATGACGTAAATTTGAAAGTCTTG---TCTCCGGTA 124135
Query 106347 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 106406
|||||| |||| | ||||| | | ||||| |||||| || | | || ||||
Sbjct 124134 ATGGATAATAATTACCATCAATAATTTTGTTTAAATTTTTTGTCATTACTTTAACAATTT 124075
Query 106407 CATGAAGTTTTTCATAATCAAA-AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465
| |||||||||||||||||| | ||||| | || || ||| | ||| | |
Sbjct 124074 TTTTAAGTTTTTCATAATCAAATTGACCGAGT-TTTTGATCAACAAAACGTGGTAATGAA 124016
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
|| ||||| ||||| || || ||| ||||| || || || | ||||||||||
Sbjct 124015 ATCGATGCTAAATTACATACGGCCACTTCATCTGGTGATGAATATTCAACAATTTCTGTA 123956
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|| | || |||| ||||| || || | ||| | ||| ||
Sbjct 123955 CAAAGATTTGAACATTTAATTGTACCAAGATTTTGTTGATT 123915
>seq1212
Length=1133891
Score = 116 bits (128), Expect = 4e-21
Identities = 247/366 (67%), Gaps = 2/366 (1%)
Strand=Plus/Plus
Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251
|||||||| ||||| || | || | || | |||||||||||| || ||||| || |||
Sbjct 869870 CGATCAAAACGACCAGGCCTTAGCAATGCTTTATCAAGGATATCTACACGATTAGTAGCG 869929
Query 9252 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311
|| | ||||||| || | ||| ||||||||||| || || | ||| ||
Sbjct 869930 GCTAACACAACAACGTTTGAAGCCGTATTGAAACCATCCATTTCGACTAATAATTGATTT 869989
Query 9312 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACG 9371
| || | |||| ||||| || | |||| || ||| |||| ||| ||
Sbjct 869990 AATGTGTTTTCCTGTTCACTATGACCACCTATACTACGGCCACCACGTTTACGTCCAACA 870049
Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431
||||| || |||||||| || | ||| ||||| ||||| || || ||| |||| | |
Sbjct 870050 GCATCGATTTCATCAATAAATAAAATGCATGGAGCATTTTTACGTGCCATTGCAAACATA 870109
Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 9490
|| ||||| | | | || |||||||||||||| || | ||| | | | || |||
Sbjct 870110 TCTCGAACACGTGAAGGACCAACACCAACAAACATTTCTAGAAACTCGGAACCAGATACA 870169
Query 9491 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550
| |||||| || || |||| |||||| || | ||| ||| | | ||| || || ||
Sbjct 870170 GT-GATGAAAGGCACTTTAGCTTCACCGGCTGTTGCTTTGGCCAACAAAGTTTTGCCAGT 870228
Query 9551 ACCTGG 9556
||| ||
Sbjct 870229 ACCAGG 870234
Score = 113 bits (124), Expect = 5e-20
Identities = 267/397 (67%), Gaps = 6/397 (2%)
Strand=Plus/Plus
Query 6904 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTT-AAGGAGTCACCACAAAACGAG 6962
|||||||||| | | ||||| ||| |||||| || ||| ||| ||| ||| ||
Sbjct 1007892 TCTATCAAGCAAGTACTTCAGAATTGTATGGTAAAGTACAAGAAGT-ACCGCAACGTGAA 1007950
Query 6963 GAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTC 7022
||||| || || ||||| || ||||| || |||| || ||||| |
Sbjct 1007951 ACAACACCATTTTATCCACGATCTCCATACGGTGTTGCAAAATCATTTGCCTATTGGATT 1008010
Query 7023 GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCAT 7082
|| ||||| || || |||| | | ||||||| | || || || ||||| |||
Sbjct 1008011 GTTGTCAATTATCGTGAAGCTTATGAAATGTTTGCCGTCAATGGTATTCTATTCAATCAT 1008070
Query 7083 GAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAGG-GTATCAAAC 7140
|||||||| ||||| |||| | ||||||||| |||||||| || || || |||
Sbjct 1008071 GAATCACCTAGACGTGGTGAAACATTTGTCACACGTAAGATTACACGTGGTGTGGCAA-- 1008128
Query 7141 AAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATT 7200
|||| | | | | || ||||| ||||||||||| | | | | ||||||
Sbjct 1008129 AAATTGTTCTTAATCGACAAGAATTCATCGAATTGGGTAATTTGGATTCAAAACGAGATT 1008188
Query 7201 GGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAAGCCG 7260
|||| || || || |||||||||||||||||| | ||| | |||||||| | | |
Sbjct 1008189 GGGGCCATGCACGTGATTATGTTGAAGCCATGTGGTTAATGTTACAACAAGAAAATCCGG 1008248
Query 7261 ACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGT 7297
| || | ||| | ||||| ||||| | ||||||||
Sbjct 1008249 AAGATTTTGTCATTGCAACCGGTGAAGCACATTCAGT 1008285
>seq768
Length=1243675
Score = 84.2 bits (92), Expect = 3e-11
Identities = 171/250 (68%), Gaps = 7/250 (3%)
Strand=Plus/Plus
Query 168495 CCAAATTGACCACACGGTTCAAGAAGGTTAATGTTGTTTGAACCCGTGTAGTCGTTTGCC 168554
||||| ||||| ||||| ||||| ||||| | |||||| | || | | | | |||
Sbjct 748776 CCAAACTGACCGCACGGCTCAAGCAGGTTCAGGTTGTTCGTTCCGACGAACTGCTGCGCC 748835
Query 168555 AACTTAACAATCGTGTCCGCTAAGGATACTTCACCATGGTGGTAC--GCAGACTTGTCCG 168612
| || || | ||| | ||| | ||| |||| || |||||||| || ||| ||| |
Sbjct 748836 ATGTTCACGACCGTCTGCGCAATCGATTCTTCGCCGTGGTGGTAGCTGCTGAC--GTCTG 748893
Query 168613 CGACATATGCCGCCAGTTGTGCCACCTTCATTTC--ATC-CTTGAGATTCTTATGGAAGC 168669
|||| || || | || |||||||||||||| | | | ||| ||||| | |||
Sbjct 748894 CGACGTAGCTTGCGAACTGCGCCACCTTCATTTCCGAGCGCACGAGGTTCTTTTTGAACG 748953
Query 168670 AAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACCATCCGCCATATGGGCAATAGAGC 168729
| |||| |||||| | ||| | ||||| || || ||| |||| | | ||| ||||
Sbjct 748954 CGCCGTACAGCACTTTGCGCTGCGCCGGCTTCAGCCCGTCCACCATGTTCGGAATCGAGC 749013
Query 168730 GCTTCAAGTC 168739
||| || |||
Sbjct 749014 GCTGCACGTC 749023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589971050567280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |