Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq435 158 1e-33 >seq435 Length=2731825 Score = 158 bits (174), Expect = 1e-33 Identities = 526/805 (65%), Gaps = 39/805 (5%) Strand=Plus/Plus Query 154332 AGAACTAAACCATGGTTGACTCAGGAAGTATTCAATAAGTATCATAGTGAAACTGACATG 154391 |||| | ||||| || || || | ||||||||| |||||||||||||| | | Sbjct 126379 AGAAAAACACCATTCTTAACACATCCATTATTCAATACATATCATAGTGAAACAAATCTT 126438 Query 154392 ATGAGATATATCTACGAGTTATGCTCTAAAGATTTCTCATTAGTAAATGGTATGGTTCCA 154451 || | ||||| | ||| ||||||| | ||||||||| || ||| | ||| Sbjct 126439 ATTCGTTATATGAAAAGATTAGAAAATAAAGATATGTCATTAGTACATTCAATGATACCA 126498 Query 154452 CTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCC-TGTGTCATGGGA 154510 | || || ||||||||||| |||||| | | ||| | || || ||| |||||| Sbjct 126499 TTAGGATCATGTACAATGAAATTGAATGCAACCACTGAAATGATACCATGT-TCATGGCC 126557 Query 154511 AGAGTTTGCTAACGTGCATCCACATACACCTATGAT-ACAGACCATGGGTTATCAGAAAA 154569 | || | | || |||||| ||| || | || ||| | | |||||||| | Sbjct 126558 AACATTAACCGATGTACATCCATATATTCC-ACCATCACAAGCTAAAGGTTATCAAGTAC 126616 Query 154570 TTATAGATGACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTAC 154629 |||| |||| || | || | ||||| | || || | |||| | ||||||| | Sbjct 126617 TTATTAATGAATTGGAACAAGATCTTTGTGAATTGACCGGTTATGATAGTGTATCATTTC 126676 Query 154630 AACCTAACGCAGGATCACAGGGTGAGTATGCAGGACT--GTTAGCAATCCAAGCATACCA 154687 |||| || | || | || ||||| ||||| ||| | ||| || ||||||| | Sbjct 126677 AACCGAATTCTGGTGCTCAAGGTGAATATGCTGGATTACGTTGT--ATAAAAGCATATCT 126734 Query 154688 TCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAAC 154747 | || | ||| || | | | ||||| |||||||||| || | |||||||||||||| Sbjct 126735 TGAATCACAAGGTGAAGGTTATCGAAATATATGTTTGATTCCGGTTTCAGCACATGGAAC 126794 Query 154748 TAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGG---TGTCA-AGTGTGATG 154803 ||||| || ||||| |||||||| | | ||||| ||| ||| | Sbjct 126795 CAATCCAGCCAGTGCAAATATGGCAGGTTT---ACGTGTAGAGCCTGTTTTAGTACTAAA 126851 Query 154804 ATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTT---G 154860 | |||||| || || | | || | |||||| | || ||| | || | Sbjct 126852 AA-ATGGTAGTATCGATAAAGCACATTT------GAAAGCTAAATTGGATAAACTTCATG 126904 Query 154861 AACTGT---CATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACA 154917 | | | | ||| | ||||| ||||| ||||| ||| |||||||||||| | | Sbjct 126905 ATCAGATTGCCTGTTTAATGATAACATATCCATCAACATTTGGTGTATTTGATGAAGATA 126964 Query 154918 TTAGACAGATATGTAAGAT----CGTTCATGACAATGGT---GGTCAGGTATATCTTGAT 154970 | || | || ||| | || | |||||| |||| | || |||||| | ||| Sbjct 126965 TCAGCGATATTTGTGAAATGATACATTCATG----TGGTTCAGCACAAGTATATTTAGAT 127020 Query 154971 GGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTA 155030 || |||||| | ||||||||||| ||||| ||| |||| |||||| ||||| Sbjct 127021 GGTGCAAATATGAATGCACAGGTTGGACTTTGTCGTCCAGGTGATTATGGTAGTGATGTT 127080 Query 155031 TGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTA 155090 | ||| |||| |||||||||| || ||||| |||||||| ||||| || || || | Sbjct 127081 TCGCATTTAAATCTACATAAAACTTTTTGTATACCACATGGTGGTGGTGGACCAGGAATG 127140 Query 155091 GGTCCTATAGGTGTAGCAAAACATC 155115 ||||| || | ||| |||||||| Sbjct 127141 GGTCCAATTGCAGTAAAAAAACATC 127165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579203228508480