Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq435 150 2e-31 >seq435 Length=2731825 Score = 150 bits (166), Expect = 2e-31 Identities = 505/773 (65%), Gaps = 31/773 (4%) Strand=Plus/Plus Query 159035 TATTTAAAAAATATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAA 159094 |||| || | |||||||||||| || | | || | ||||| | |||| | | Sbjct 126407 TATTCAATACATATCATAGTGAAACAAATCTTATTCGTTATATGAAAAGATTAGAAAATA 126466 Query 159095 AAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACG 159154 ||||| | ||||||||| || ||| | ||| | || ||||| |||||| | || | Sbjct 126467 AAGATATGTCATTAGTACATTCAATGATACCATTAGGATCATGTACAATGAAATTGAATG 126526 Query 159155 CAGCATCAGAACTGATGCC-TGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213 || | | ||| |||| || ||| |||||| | || | | || |||||| ||| Sbjct 126527 CAACCACTGAAATGATACCATGT-TCATGGCCAACATTAACCGATGTACATCCATATATT 126585 Query 159214 CCTATGAT-ACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATG 159272 || | || ||| | | ||||||||| | |||| |||| || | || | || Sbjct 126586 CC-ACCATCACAAGCTAAAGGTTATCAAGTACTTATTAATGAATTGGAACAAGATCTTTG 126644 Query 159273 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 159332 ||| | || || | |||| | ||||||| ||||| || | || | || ||||| || Sbjct 126645 TGAATTGACCGGTTATGATAGTGTATCATTTCAACCGAATTCTGGTGCTCAAGGTGAATA 126704 Query 159333 TGCAGGACT--GTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAAT 159390 ||| ||| | ||| || ||||||| | | || | ||| || | | | ||||| Sbjct 126705 TGCTGGATTACGTTGT--ATAAAAGCATATCTTGAATCACAAGGTGAAGGTTATCGAAAT 126762 Query 159391 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGG 159450 |||||||||| || | |||||||||||||| ||||| || ||| |||||||| Sbjct 126763 ATATGTTTGATTCCGGTTTCAGCACATGGAACCAATCCAGCCAGTGCAAATATGGCAGGT 126822 Query 159451 ATGAAAGTTGTAGG---TGTCA-AGTGTGATGATGATGGCAACATAGACATCAAAGATCT 159506 | | ||||| ||| ||| | | |||| | || || | | || | Sbjct 126823 TT---ACGTGTAGAGCCTGTTTTAGTACTAAAAA-ATGGTAGTATCGATAAAGCACATTT 126878 Query 159507 AGAGAAGAAAGCAATCATGAATACATTT---GAACTGT---CATGTATTATGATTACATA 159560 |||||| | || ||| | || || | | | ||| | ||||| ||||| Sbjct 126879 ------GAAAGCTAAATTGGATAAACTTCATGATCAGATTGCCTGTTTAATGATAACATA 126932 Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGA 159620 |||||| ||| |||||||||||| | | ||||| | || ||| | || | ||| Sbjct 126933 TCCATCAACATTTGGTGTATTTGATGAAGATATCAGCGATATTTGTGAAATGATACATTC 126992 Query 159621 GAATGGT---GGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGC 159677 |||| | || |||||| | |||||||||||| | ||||||||||| || || Sbjct 126993 ATGTGGTTCAGCACAAGTATATTTAGATGGTGCAAATATGAATGCACAGGTTGGACTTTG 127052 Query 159678 AAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTAT 159737 ||| |||| |||||| ||||| | ||| |||| ||||||| || || ||||| Sbjct 127053 TCGTCCAGGTGATTATGGTAGTGATGTTTCGCATTTAAATCTACATAAAACTTTTTGTAT 127112 Query 159738 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATC 159790 |||||||| ||||| || || || | ||||| |||| ||| |||||||| Sbjct 127113 ACCACATGGTGGTGGTGGACCAGGAATGGGTCCAATTGCAGTAAAAAAACATC 127165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588041482453920