Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq435 150 2e-31
>seq435
Length=2731825
Score = 150 bits (166), Expect = 2e-31
Identities = 505/773 (65%), Gaps = 31/773 (4%)
Strand=Plus/Plus
Query 159035 TATTTAAAAAATATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAA 159094
|||| || | |||||||||||| || | | || | ||||| | |||| | |
Sbjct 126407 TATTCAATACATATCATAGTGAAACAAATCTTATTCGTTATATGAAAAGATTAGAAAATA 126466
Query 159095 AAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACG 159154
||||| | ||||||||| || ||| | ||| | || ||||| |||||| | || |
Sbjct 126467 AAGATATGTCATTAGTACATTCAATGATACCATTAGGATCATGTACAATGAAATTGAATG 126526
Query 159155 CAGCATCAGAACTGATGCC-TGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213
|| | | ||| |||| || ||| |||||| | || | | || |||||| |||
Sbjct 126527 CAACCACTGAAATGATACCATGT-TCATGGCCAACATTAACCGATGTACATCCATATATT 126585
Query 159214 CCTATGAT-ACAGACCATGGGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATG 159272
|| | || ||| | | ||||||||| | |||| |||| || | || | ||
Sbjct 126586 CC-ACCATCACAAGCTAAAGGTTATCAAGTACTTATTAATGAATTGGAACAAGATCTTTG 126644
Query 159273 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 159332
||| | || || | |||| | ||||||| ||||| || | || | || ||||| ||
Sbjct 126645 TGAATTGACCGGTTATGATAGTGTATCATTTCAACCGAATTCTGGTGCTCAAGGTGAATA 126704
Query 159333 TGCAGGACT--GTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAAT 159390
||| ||| | ||| || ||||||| | | || | ||| || | | | |||||
Sbjct 126705 TGCTGGATTACGTTGT--ATAAAAGCATATCTTGAATCACAAGGTGAAGGTTATCGAAAT 126762
Query 159391 GTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGG 159450
|||||||||| || | |||||||||||||| ||||| || ||| ||||||||
Sbjct 126763 ATATGTTTGATTCCGGTTTCAGCACATGGAACCAATCCAGCCAGTGCAAATATGGCAGGT 126822
Query 159451 ATGAAAGTTGTAGG---TGTCA-AGTGTGATGATGATGGCAACATAGACATCAAAGATCT 159506
| | ||||| ||| ||| | | |||| | || || | | || |
Sbjct 126823 TT---ACGTGTAGAGCCTGTTTTAGTACTAAAAA-ATGGTAGTATCGATAAAGCACATTT 126878
Query 159507 AGAGAAGAAAGCAATCATGAATACATTT---GAACTGT---CATGTATTATGATTACATA 159560
|||||| | || ||| | || || | | | ||| | ||||| |||||
Sbjct 126879 ------GAAAGCTAAATTGGATAAACTTCATGATCAGATTGCCTGTTTAATGATAACATA 126932
Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGA 159620
|||||| ||| |||||||||||| | | ||||| | || ||| | || | |||
Sbjct 126933 TCCATCAACATTTGGTGTATTTGATGAAGATATCAGCGATATTTGTGAAATGATACATTC 126992
Query 159621 GAATGGT---GGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGC 159677
|||| | || |||||| | |||||||||||| | ||||||||||| || ||
Sbjct 126993 ATGTGGTTCAGCACAAGTATATTTAGATGGTGCAAATATGAATGCACAGGTTGGACTTTG 127052
Query 159678 AAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTAT 159737
||| |||| |||||| ||||| | ||| |||| ||||||| || || |||||
Sbjct 127053 TCGTCCAGGTGATTATGGTAGTGATGTTTCGCATTTAAATCTACATAAAACTTTTTGTAT 127112
Query 159738 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATC 159790
|||||||| ||||| || || || | ||||| |||| ||| ||||||||
Sbjct 127113 ACCACATGGTGGTGGTGGACCAGGAATGGGTCCAATTGCAGTAAAAAAACATC 127165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588041482453920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |