Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 1e-36
seq391 118 2e-21
seq558 114 3e-20
>seq1
Length=3593316
Score = 168 bits (186), Expect = 1e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
|| ||| || || ||||| || || ||||||||||| |||||||| | | |||| ||
Sbjct 1032523 TCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGACAATGTTCGGCC 1032582
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| ||||| || || ||||| || | ||||| |||||||| ||||| ||||||||
Sbjct 1032583 ATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGAATTCCTTCTTT 1032642
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||| ||||| |||||| || |||||||| ||||| ||||||||| | ||||
Sbjct 1032643 GTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACTTCCAATGTAAT 1032702
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||||||||| || || | |||||
Sbjct 1032703 GGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 149 bits (164), Expect = 1e-30
Identities = 151/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||| |||||||| ||||| ||||| | | |||| ||||||||||| || |||||
Sbjct 1033057 GTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCATCTTCGAGTTGTTTACCA 1033116
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| | |||||| || ||||| ||||| |||||||| || || ||||| ||
Sbjct 1033117 GCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTATCCTGGATTTTAGCTTTC 1033176
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || |||||||| ||| ||||| | |||| || || || |||||||||
Sbjct 1033177 ACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTT 1033236
Query 195124 TTTACGAACACTTGCAT 195140
|||||||| | ||||||
Sbjct 1033237 TTTACGAAAATTTGCAT 1033253
Score = 149 bits (164), Expect = 1e-30
Identities = 151/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || ||||||||||| ||||||| | ||| | |||||||| | || |||||
Sbjct 1033285 GTTGATTCCTTTTGAATATTATAATCGGACAAAGTACGACCATCTTCCAATTGTTTACCA 1033344
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| | |||||| || ||||| |||||||||||||| ||||||||||| ||
Sbjct 1033345 GCAAAGATCAATCGTTGCTGATCTGGTGGAATGCCTTCTTTATCTTGAATTTTGGCTTTA 1033404
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || ||||||||||| ||| ||||| | || | || || || ||||| |||
Sbjct 1033405 ACATTTTCGATGGTGTCCGATGGTTCGACTTCCAAAGTGATGGTTTTACCAGTCAATGTT 1033464
Query 195124 TTTACGAACACTTGCAT 195140
|||||||| | ||||||
Sbjct 1033465 TTTACGAAGATTTGCAT 1033481
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| ||| || | || | || || |||||||| || || ||||||| | ||||
Sbjct 1031609 AGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGA 1031668
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| | || || || || ||||| | || || || ||||| ||||| ||||||
Sbjct 1031669 CCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCT 1031728
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| |||||| ||||| || || || || ||||| ||||||||| | |||
Sbjct 1031729 TTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTG 1031788
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
| || || || ||||| ||||||||||| | |||||||
Sbjct 1031789 ATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 118 bits (130), Expect = 2e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| ||||||||||| || |||||||| | | || | |||||||| | || |||||
Sbjct 1032313 AGTTGACTCTTTTTGGATGTTGTAATCCGATAATGTACGACCATCTTCTAATTGTTTACC 1032372
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
|| ||||| | ||||| |||||||| ||||| || ||||| || ||||||||| |||
Sbjct 1032373 GGCAAAGATCAAACGTTGCTGGTCTGGTGGAATTCCCTCTTTATCCTGAATTTTTGCCTT 1032432
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|| || || || || || || ||| || || | || | || || || ||||| ||
Sbjct 1032433 CACATTTTCGATTGTATCAGATGGTTCAACGTCTAATGTGATGGTTTTACCAGTCAATGT 1032492
Query 195123 TTTTACGAACACTTGCAT 195140
||| ||||| | ||||||
Sbjct 1032493 TTTCACGAAAATTTGCAT 1032510
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||| |||||||||||||||||||||| | || | |||||||| | || |||||
Sbjct 1031858 GTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCCAATTGTTTACCA 1031917
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
||||| || | ||||| || ||||| ||||| ||||| || |||||||| || ||
Sbjct 1031918 GCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGAATCTTGGCTTTT 1031977
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || || ||||| || ||||| | || | ||| || || || | ||
Sbjct 1031978 ACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTTACCAGTTAGGGTC 1032037
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 1032038 TTGACGAAAATTTGCAT 1032054
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988
|| || || ||||| || || ||||||||||| |||||||| | || || | ||||||
Sbjct 1032755 AATACGAGATGAAGTGTAGATTCTTTTTGAATGTTGTAATCCGATAGGGTGCGACCATCT 1032814
Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
|| | ||| |||||||| || || | ||||| || ||||| || ||||||
Sbjct 1032815 TCCAACTGTTTACCTGCAAAAATCAAACGTTGCTGATCTGGTGGGATGCCT 1032865
>seq391
Length=841353
Score = 118 bits (130), Expect = 2e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||| ||||| ||||| || || ||||| |||| | ||| | || || || |||
Sbjct 730850 TGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGATAAAGTGCGGTTGTCGTCTAGTTGC 730909
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || || ||||||| ||| || || || ||||| |||||||||||||| |||||
Sbjct 730910 TTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGGAATTCCTTCTTTGTCTTGGATTTTG 730969
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||| | |||||| ||||| |||||| || ||||||| |||| |||||
Sbjct 730970 GTTTTGATGGACTCAATAGTGTCATTTGGTTCCACCTCCAGGGTAATGTTCTTCCCTGTT 731029
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|| ||||| ||||| | |||||
Sbjct 731030 AATGTTTTCACGAAAATCTGCAT 731052
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||| ||||| || |||||||| || | | |||||| |||||| | ||| || ||
Sbjct 251192 GTGGATTCTTTCTGGATATTGTAGTCTGACAAAGTTCTAGAATCTTCTAACTGTTTTCCA 251251
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| || || | ||| ||||||||||| ||||| ||||||||||| |||||||| |||
Sbjct 251252 GCAAAAATTAATCGCTGTTGGTCTGGCGGAATCCCTTCTTTGTCCTGAATTTTCATCTTT 251311
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| ||||||| ||||| ||| ||||| | | | | |||||||| || ||
Sbjct 251312 ACACTCTCAATAGTGTCGTTGGGTTCGACTTCCAAAGATATATTTTTTCCTGTTAAGGTC 251371
Query 195124 TTTACGAACACTTGCAT 195140
||||| || | ||| ||
Sbjct 251372 TTTACAAAAATTTGTAT 251388
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || || || | ||| || || |||||||| |||||||| | | || | | |||
Sbjct 250948 CAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGACAATGTCCGCGAATC 251007
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| || ||||| || || || || | || ||||| || || ||||| |||||||| ||
Sbjct 251008 GTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGAATCCCTTCTTTATC 251067
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|||||||| || ||| | |||||||| || || ||||| || | || |
Sbjct 251068 CTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACTTCGAGAGAAATATT 251127
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||||||||||||||||||| || | ||||||
Sbjct 251128 TTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
>seq558
Length=611125
Score = 114 bits (126), Expect = 3e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| || || | ||||| |||||||||||| ||||| ||||| || || || || |
Sbjct 303931 AGTCGCAGTACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGT 303872
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| || ||||||||||| || || ||||| | || || ||||| || |||||||| |||
Sbjct 303871 CCGTCGTCGAGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCT 303812
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
||||| || || || |||||| |||| || |||||
Sbjct 303811 TTGTCCTGGATCTTAGCTTTGACGCTCTCGATCGTGTC 303774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109462807461974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |