Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq458 131 2e-25 >seq458 Length=503182 Score = 131 bits (144), Expect = 2e-25 Identities = 207/297 (70%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 104820 TACCATTGCTTACAACaaaaaaaaTAGTTTACGCCAATATTCTTAAAGAATTATTATGGG 104879 |||||||| | ||||||||| || ||| | || || |||||||||||||| Sbjct 281023 TACCATTGATCACAACAAAACGTGTATTTTGGCGTGGTGTTGTTGAAGAATTATTATGGT 280964 Query 104880 TGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTGTTAAAGTATGGAATG 104939 | || ||||||| ||| |||| || ||| |||| ||||| ||| | ||| ||| Sbjct 280963 TTATAAAAGGTTCAACTGATTCGAAAAAATTATCCGAAAAAGGTGTAAAAATTTGGGATG 280904 Query 104940 ATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTCGAAAAGAAGGTGATT 104999 ||||||||| | ||| | ||| | ||| ||| ||| ||||||||||| Sbjct 280903 CAAATGGTTCAAAAGAATTTCTTGATAGTCTTGGTTTTATTGATCGTCAAGAAGGTGATC 280844 Query 105000 TAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGACTGTGATA 105059 |||| || ||||||| ||||||||||||||| ||| || ||||| || | | | Sbjct 280843 TAGGTCCTGTTTATGGTTTTCAATGGAGACATTTTGGTGCCGAATATCGTGATAATCAAA 280784 Query 105060 CCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACTATAAAAA 105116 | || |||| || |||||||| || ||||||| || ||||| |||| || |||| Sbjct 280783 CTGATTATAATGGTCAAGGTATTGATCAATTAAAACAGCTTATAAAAACAATCAAAA 280727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658392319887120