Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1 574 5e-159 seq569 565 3e-156 seq990 114 1e-20 seq458 82.4 9e-11 >seq1 Length=3593316 Score = 574 bits (636), Expect = 5e-159 Identities = 1265/1912 (66%), Gaps = 80/1912 (4%) Strand=Plus/Minus Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063 |||| |||||| |||| ||||||||| || || || || ||| ||| ||| ||| | ||| Sbjct 3538235 GCTGGTTTTGTACGTAGATAATACATTCCGGTTTTCAATCCTGAACGCCAACCAAAAAAA 3538176 Query 47064 TGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTC 47123 ||||| || ||||| | ||| | ||| | || |||||| || | |||||||| Sbjct 3538175 TGCATTGATGTCAATTTTGTGATACTGGTTTCAGCAAAATGAATGTTTAATGATTGACTT 3538116 Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183 ||||| ||||| ||||| | |||| | ||||| | | ||| | |||||||| ||| Sbjct 3538115 TGATCGATAAAGGCACCACGATCAACAGCCATCTGGACAATCGTTTTCTGTGGTATTTCC 3538056 Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATT---AGTATTTTGAATAGAT 47240 || || ||||| || | | | ||| ||||| || | | | | |||||||||| || Sbjct 3538055 CAAACAGTTTTGTACAAGTTTCGAATATCTTCCGGAATAATGTCAATATTTTGAATCGAA 3537996 Query 47241 CCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaat 47300 ||| | | ||| ||||| |||| | ||| |||||| | |||||||| Sbjct 3537995 CCTTTGGATGATATTATTTTCATTTTAAGCAAATTGTTCCAAAGACCTAATTCAGTTAGA 3537936 Query 47301 gtttttaaAAGATGAGGATTAAC------------------------------------- 47323 || |||||| ||||| || Sbjct 3537935 TCACGTATAAGATGTGGATTTACGACCTAAAATCATATTTAAATATAAAATCACATAACT 3537876 Query 47324 -AATT---------------TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTAC 47367 |||| |||||||||||||| || || | | | ||||||||| Sbjct 3537875 TAATTATCAACAGACAAACCTGAAATTCTCCAGAAAGAACACGTCTTGTGTATATATTAG 3537816 Query 47368 TTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCA 47427 ||||||| ||||| ||||| ||||| || |||| |||||| ||||| || ||||| |||| Sbjct 3537815 TTGTATAAGGTTCGATAGACTCATTGTTGCCAAGAATTTGTGCAGTCGAAGCTGTTGGCA 3537756 Query 47428 TGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTT 47487 | | || || | || ||||||| || ||||||||| || | Sbjct 3537755 TTGGAGCCACAAGCAAACTATTTCGTATTCCATATTTAGCGATTCGAGATTTCAAATCAT 3537696 Query 47488 TCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTAC 47547 |||||||||||||||||| ||| |||||| | |||| | || ||||| |||||| Sbjct 3537695 TCCAATCCCAAAGATCTGTTGGTTTTCGATTCCACATATCAAACTGTAGAATGCCTTTAG 3537636 Query 47548 TTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTG 47607 || || || || | ||| |||| ||| |||| | | || || | ||||||||| | Sbjct 3537635 ATACTGGTGATCCTTCATAAGTTTCATATTGACCTTTTTCTTGGGCTAATTCACAACTCG 3537576 Query 47608 CTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTG 47667 ||| |||| | |||||| ||||||||||| || | || || || | |||||| Sbjct 3537575 TTTCTAATGATCCATAATAAATTGTTTCAAAAATCTGAATATTGAGCAATCGAGCTTCTT 3537516 Query 47668 ATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATAC 47727 || || ||||| || | |||||| |||||||||||||| || | Sbjct 3537515 CACTATCGAATGGATAACGCATCAAAATAAACGCATCTGCTAATCCTTGAACACCGATTC 3537456 Query 47728 CAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATAT 47787 | ||||||| |||| ||| ||| | ||||||||||| ||||| | | | | Sbjct 3537455 CCATTGGTCGATGACGAAGATTCGAACGTTGAGCTTCTGGTACAGGATAGTAAGTCACGT 3537396 Query 47788 CTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAAT 47847 | |||| ||| | ||| ||||| | | ||||| | ||||| Sbjct 3537395 CGATAACTTTGTCCAGATTACGAGTTACAACCTTGACAATGGATTTCAATTTTTCAAAAT 3537336 Query 47848 CAAACTT--GTTATTT---AT-AACAAACCTATTAAGTGCTATAGATGCTAGATTACATA 47901 |||| | ||| ||| || |||||| |||| | ||| || || ||||||||||| | Sbjct 3537335 CAAAGATTCGTTTTTTTGGATCAACAAATTTATTCAATGCGATTGAAGCTAGATTACAGA 3537276 Query 47902 CAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTT 47959 | ||||| |||| || ||| | ||||| | ||||| | ||| ||||| |||||| Sbjct 3537275 CGGCTACTTCATCTTTAGATGA--ATATTCCACAATTTCGGTACAAAGATTCGAACATTT 3537218 Query 47960 GATAGTACCCAAATTTTGATGATTATTNNNNTTG-TTACATGCGTCCTTGTAAAGCATAA 48018 ||| ||||| | |||||| ||||| | | | ||||| || ||||||| ||| Sbjct 3537217 GATTGTACCGAGATTTTGTTGATT-TGATTTTCGATTACAATGATCTTTGTAAACCATGT 3537159 Query 48019 AAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGC----C 48074 | |||||||||||||| || || ||||||| |||| ||||| | | ||| | Sbjct 3537158 ATGGTGTTCCAGTTTCGATTTGTGATTCAAGAATAGCAAACCAAAGAACACGAGCACGAC 3537099 Query 48075 TTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCA 48134 || | | | | | | ||| |||| ||| || ||| | || |||||||| Sbjct 3537098 ATTGTGATCGATATCGTTTT----TCATTTTCATAACCTTCATAAAGTTTTTCAAATTCT 3537043 Query 48135 TC-CCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCA-ATCCT 48192 || ||| ||| || | |||||| |||||||||| ||||||||||||||||| || | Sbjct 3537042 TCACCCCAACA-ATCAAATAACCCGGGACATTCATGCGGACACATCAATGACCACATTC- 3536985 Query 48193 CATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCC 48252 |||| | | ||| | |||| |||| ||| || ||||| ||||| ||||||||| | Sbjct 3536984 CATCTTGATCTACGCGTTTCATGAATAAATCAGGAATCCATAGAGCATAAAATAAATCAC 3536925 Query 48253 TAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAG 48312 | | |||||| || || |||| | ||| ||||| || | ||||||| Sbjct 3536924 GTGCACGTAGTTCCTCCGAACCGGTATTTTTGCGAAGACTTAGAAAATCAAAGATATCAG 3536865 Query 48313 CATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTA 48372 |||||||||||| | ||| || || | | | || || ||||| ||||| |||||||| | Sbjct 3536864 AATGCCATGGTTCCAGATAGATGGCAAATGCTCCAGGACGTTTGTTACCACCTTGATCAA 3536805 Query 48373 TATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCAT 48432 ||||| |||||||| || || || | || ||| || | | ||||| || || |||| Sbjct 3536804 CATATCGAGCAGTATTATTGTATACGCGTAGCATAGGAATCAAGCCATTAGAGATTCCAT 3536745 Query 48433 TGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCAC 48492 | || || | ||||||||| ||| || || ||| | ||| || ||| || |||| Sbjct 3536744 TTGTACCGGCAATATAACTACCAGAAGATCGGATACAATGAATATTAAGACCAATGCCAC 3536685 Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552 | || ||| || || | ||||| ||||||| |||||||| || ||||| || |||| Sbjct 3536684 CAGCTGATTTTGAGATGATGGCACATTGTTTAAGCGTATCATATATACCTTCAATGCTAT 3536625 Query 48553 CATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAA 48612 |||| ||||| | | |||||||| || | |||||| | ||||| | ||| | Sbjct 3536624 CATCACTCATAGTGAGCAGAAAACATGATGATAATTGCGGCCGTTTTGTTCCGGCATTGA 3536565 Query 48613 ATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAA 48672 | || || || |||||||| ||||||| || || |||| ||| |||||||||||||| Sbjct 3536564 ACAACGTAGGTGATGCATGTGTAAACCAATTTTCCGATATCAAATTATATGTTTCAATGG 3536505 Query 48673 CAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTC 48732 ||| ||| ||||| |||| ||||| |||| |||||| ||||||| ||||||| Sbjct 3536504 CAGCATCAATATCATCACGATGAATACCAATAGCACAACGCATCAACATATGCTGAGGTC 3536445 Query 48733 TTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAA 48792 |||| |||| ||| ||||| | | ||| | | |||||||| ||||| | Sbjct 3536444 TTTCTACAACTTTACCGCCAATTTTGAGCAAATAACTTCGATATAATGTTTTGAAACCGA 3536385 Query 48793 AATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTC 48844 |||| ||||| ||| || ||||| || || | ||||| || | ||| Sbjct 3536384 AATAATTGTAATTAAAATCACGATCATAGATTATGGCCGAATTAATACGTTC 3536333 Score = 526 bits (582), Expect = 2e-144 Identities = 665/906 (73%), Gaps = 6/906 (1%) Strand=Plus/Minus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| || || ||||||||||||||||||| | ||||||||| ||||| | ||| || || Sbjct 930130 CATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTC 930071 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGA-ATC 18775 ||||||||| |||||||||||||||||||||| || ||||| || ||||| | | Sbjct 930070 TAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATA-ATGTTTTTCACAAT 930012 Query 18776 CTAATTCTAATAGTAGTCTATCCGCTACAA-ATTTAATATATGTGTTCATCATATCACAA 18834 ||||||| | | || | ||| || |||| ||| |||||| | ||| | | | | Sbjct 930011 CTAATTCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCA 929953 Query 18835 TTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACT 18894 ||||| || || ||| || |||| |||||| ||||||||||||||||| ||||| || Sbjct 929952 TTCATACCGATCAATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACA 929893 Query 18895 GCCTCTGATATAATAGATACAACTCTATCTTCATTA-GGAGGGTATAGAAGATGTTTAAA 18953 || || ||||| |||| || | | || | ||| | | ||| ||| | ||| Sbjct 929892 GCATCAATAATAATTTCAACAATTCGTTGTG-ATGATGGACGATTACGAATATGATGAAA 929834 Query 18954 CATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAA 19013 || | ||| |||||||||||||||| ||| || || | ||||||||||| ||||| Sbjct 929833 CAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAA 929774 Query 19014 TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGA 19073 || | ||||||||| || || | |||||||| ||| || || | |||||||| || || Sbjct 929773 GGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGA 929714 Query 19074 AAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATT 19133 ||| ||||| ||||| || || ||||| |||| || | ||| || | || | || Sbjct 929713 AAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATC 929654 Query 19134 ATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 || || |||| | ||||| | ||| || || | |||||| || | | ||| Sbjct 929653 ATCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGTAT 929594 Query 19194 AGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACT 19253 || ||| |||||| | | |||| ||| ||||| | || |||||||| Sbjct 929593 AGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATAATGA 929534 Query 19254 GTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTC 19313 |||||||||||||||| |||||| ||||| || |||||||| |||||||| | |||||| Sbjct 929533 ATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTGCTTC 929474 Query 19314 TGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACT 19373 || ||| ||||| |||| | ||| | ||| | |||||||||||||| || |||||||| Sbjct 929473 TGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCATCACT 929414 Query 19374 AGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT 19433 || |||||||| || ||||||||| ||| ||||||||||||| || ||||| |||| Sbjct 929413 TGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATTTATT 929354 Query 19434 CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493 ||||| || ||| | || |||||||||||||||||||||||| || || || || Sbjct 929353 CCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTTCAGC 929294 Query 19494 TTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTT 19553 |||||| ||||| |||| |||||| ||||||| || ||||| | |||||| | |||| Sbjct 929293 TTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAAACGATTTGG 929234 Query 19554 ATTTTC 19559 |||||| Sbjct 929233 ATTTTC 929228 >seq569 Length=351751 Score = 565 bits (626), Expect = 3e-156 Identities = 1117/1646 (68%), Gaps = 37/1646 (2%) Strand=Plus/Minus Query 46973 TTTTTCCACAGTAAACTTAATTGGAT-TACTCGCTGATTTTGTTCGTAAATAATACATAC 47031 ||| || |||||||| | || | | | || || | ||||||||| | ||||||||| | Sbjct 124934 TTTATCAACAGTAAATTGTATGGCTTGTGCT-GCCGGTTTTGTTCGAAGATAATACATTC 124876 Query 47032 CAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAG 47091 | || ||||| || || ||| ||||| |||||||| || | ||| | | | | Sbjct 124875 CTGTTTTTAATCCATTACGCCAACCATAAAAATGCATTGATGTAATTTTTGCTTTAGATG 124816 Query 47092 GTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTG 47151 |||| | ||||| | ||| | |||||||| ||||| ||||||||||| | |||| | Sbjct 124815 GTTCAGCCATATGTACATTTAATGATTGACTTTGATCGATAAATGCACCACGATCAATAG 124756 Query 47152 CCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGT 47211 ||||||| | |||| |||||||||| ||||||||||||||||| | | ||| || | Sbjct 124755 CCATATCGATAATACATTTTTGTGGTATTTCCCATACTGTTTTATATAATGATTTGATAT 124696 Query 47212 CTTCTGGGA---GATTAGTATTTTGAATAGATCCTCCgttttctataattttgtttttta 47268 | || || | || | ||| || || || || | || | ||||| ||||| | Sbjct 124695 CATCCGGTATTGAATCAATATCCTGTATTGAACCACGATTAGCAATAATAGAATTTTTCA 124636 Query 47269 attcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTT 47328 |||||| ||||||| | | |||| ||| | | ||| |||||||||| | Sbjct 124635 ATTCATCATTCCAAAGTCCCAAATTAATTAAATCTTTAAGTAAATGTTGATTAACAATAT 124576 Query 47329 GAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATT 47388 ||| || || | || | | |||| ||||| |||||||||||| | |||| Sbjct 124575 CAAAACTACCGGACATAACACGTCTAGTATAGATATTTGATGTATATGGTTCAAATGATT 124516 Query 47389 CATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTAT 47448 ||||||| |||| |||||| || ||||||||||| ||||| | |||||| ||||| |||| Sbjct 124515 CATTATTACCAAGAATTTGTGCGGTTGATGCTGTTGGCATTGGTGCAACCAATAAACTAT 124456 Query 47449 TTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATG 47508 ||| | |||||||| || | ||||| ||||||||| | || Sbjct 124455 TTCGAATACCATATTTGGAAATTTTTTCTTTCAATTCAGACCAATTCCAAAGATCGGTTG 124396 Query 47509 GAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATG 47568 | | |||||| | ||||||||| ||||| ||||| || || || || | ||| | Sbjct 124395 GTGTACGATTCCACATATCATATTGTAGAATACCTTTTGATACTGGTGATCCTTGATAAG 124336 Query 47569 TTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATA 47628 ||| ||| ||||| ||| ||| || | ||||||||||||||||||||||| |||||| | Sbjct 124335 TTTCATATGGACCATATTGTTCTGCTAATTCACAACTTGCTTCCAATGCACCATAATAAA 124276 Query 47629 TTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGATTCAAAAGGATANNNNN 47688 ||||||||||||||| || || | || ||||||| | |||| | ||||| Sbjct 124275 TTGTTTCAAATATTTGGATATTCATTTTTTTTGCTTCCAAACTTTCATATGGATAACGTA 124216 Query 47689 NNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTAT 47748 |||| ||| || || ||||| ||||||| ||||| |||| |||| | || Sbjct 124215 ATAGACTGAATGCATCGGCTAAACCTTGTACACCAAGTCCAATAGGTCGATGACGTAAAT 124156 Query 47749 TAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNNN 47808 | |||| | || ||||||||||| | || ||| |||||||| |||| | Sbjct 124155 TTGAAAGTCTTGTCTCCGGTAATGGATAATAATTACCATCAATAATTTTGTTTAAATTTT 124096 Query 47809 NNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAA-----CTTGTTATTTAT 47863 ||||||| | | | ||| | | ||||||| | ||| || || Sbjct 124095 TTGTCATTACTTTAACAATTTTTTTAAGTTTTTCATAATCAAATTGACCGAGTTTTTGAT 124036 Query 47864 -AAC-AAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTA 47921 ||| |||| | ||| || || ||||||| ||||||||| || || |||| ||| Sbjct 124035 CAACAAAACGTGGTAA-TGAAATCGATGCTAAATTACATACGGCCACTTCATCTGGTGAT 123977 Query 47922 GTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGA 47981 | ||||| | ||||| | ||| ||||| |||||| || ||||| | |||||| ||| Sbjct 123976 GAATATTCAACAATTTCTGTACAAAGATTTGAACATTTAATTGTACCAAGATTTTGTTGA 123917 Query 47982 TT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCT 48039 || ||| ||||| || ||||| | |||| | || || || ||||| || | Sbjct 123916 TTTGATTTACG--ATTACAATGATCTTTGTATAACATATATGGAGTACCGGTTTCAATTT 123859 Query 48040 GAGATTCAATGATAGATTTCCAAAC----AGTCCTAGCCTTTATAACAGCT--CTAGCTT 48093 | | || | ||| || ||||| | | | |||| || | | | ||| Sbjct 123858 GTGCATC--TAATA---TTGCAAACCATAATTGATGTGCTTT-TACCTGTTGCCTATAAC 123805 Query 48094 TATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATC-CCCATACACATTATCT 48152 | ||| |||| ||||| |||||| | |||||||| || ||| ||| || || | Sbjct 123804 GACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCTTCACCCCAACA-ATCATGT 123746 Query 48153 AACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTC 48212 | |||||||||||||| |||||||| |||||||| |||| ||| || | || Sbjct 123745 AGACCAGGACATTCATTCGGACACATTAATGACCACATTGCATCCATTTCAACACGTTTC 123686 Query 48213 ATAAATATATCTGGTATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATT 48271 ||||||| ||| |||||||| | || ||| |||| ||| | | | || |||||| Sbjct 123685 ATAAATAAATCCGGTATCCATAATGC-ATAGAATAGATCACGTGCACGTAATTCTTCCGA 123627 Query 48272 GCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331 ||| ||||| |||| | || | ||| | | |||||| | |||||||||||||| ||| Sbjct 123626 ACCAGTATTCTTTTTCAAATCTAAAAATGCAAATATATCTGAATGCCATGGTTCTAGATA 123567 Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391 || || | | ||||||| ||||| ||| |||||||| | ||| | || ||||| || Sbjct 123566 GATAGCAAATGCACCTGGACGTTTTCCACCACCTTGATCAACATAACGTGCTGTATTATT 123507 Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451 | | || | ||||||||| || | |||||||| | |||||| || || | |||||| Sbjct 123506 AAATACACGTAACATTGGAACGAGTCCATTTGAAAAACCATTAGTACCAGCAATATATGA 123447 Query 48452 TCCACTAGCTCTTATATTA-CTA-ATTGAAATACCTATACCACCTGCCATTTTAGATATT 48509 ||| | | ||| | || ||| || ||| |||||||| || ||| || | Sbjct 123446 TCCTTGTGAACGAATACAATGTACATTTAA--ACCAATACCACCAGCAGATTTTGAAACA 123389 Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 | ||||| ||||| | |||||||| |||||||| ||||||||||| ||| |||| Sbjct 123388 ATTGCACAACGTTTTAATGTATCATATATTCCTTCAATACTATCATCGGACATTGTTAAC 123329 Query 48570 AGAAAACAACTAGACATTTGCGGATG 48595 || ||||| |||||||| ||||| Sbjct 123328 AGGAAACAGGATGACATTTGTGGATG 123303 Score = 269 bits (298), Expect = 3e-67 Identities = 434/622 (70%), Gaps = 29/622 (5%) Strand=Plus/Minus Query 48608 ATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTC 48667 ||| ||||||||||| |||||||| |||||||| || || | | ||||| ||||| Sbjct 123217 ATTGAATAATGTTGGTGATGCATGTGTAAACCATCCTTCAGACATAAGATTATAAGTTTC 123158 Query 48668 AATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTG 48727 || | ||||| ||||| || ||||||||| | || |||||||| ||||||| ||| Sbjct 123157 GATTGCCGAATCAATATCATCTTTATGTATACCAACAGCAACACGCATCAACATATGTTG 123098 Query 48728 AGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAA 48787 |||| |||||||| || ||| |||||||| | ||||| | ||||||||| || Sbjct 123097 TGGTCGTTCAACAACATTACCATTAATTTTCAATAAATATGCACGATACAATGTTTTGAA 123038 Query 48788 ACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATTTATTC------- 48840 ||||||||| || | | | || ||||| ||| |||| |||||||| || Sbjct 123037 ACCAAAATAATTAAAACGATAATCACGATCATAAATTATTGCTGAATTTAATCGTTCAGA 122978 Query 48841 --TTTCCTTATG---TTTATATACTACATCC---ATTA----CATTTTTTGA-------T 48881 ||||| || |||||| || |||| |||| |||| ||| | Sbjct 122977 ATTTTCCATAATAATTTTATAAACATCATCGGCAATTAATGGCATTGATTGGCCGGTTTT 122918 Query 48882 ATAATTGATTCCTTGTAAAGA--TCTTCTACAACATCACTAAATAttttttttGTTTCTT 48939 || ||| ||| ||||| | | || | || |||||| ||| |||| |||||||||| Sbjct 122917 ATCATTT-TTCATTGTATACAAATCATGTATAACATCGGAAAAATTTTTCTTTGTTTCTT 122859 Query 48940 TATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATTGTTG 48999 | || | ||| ||||| || || | ||||| | || ||||||||| ||| |||||| Sbjct 122858 TTTGTAAATTTGATATGGAAATACGTGCAGCAAGTACAGCATAATCAACATGTTTTGTTG 122799 Query 49000 TACATGTACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACCTGTAT 49059 | |||| || ||||| || || ||| ||| |||| | || || | ||| | || Sbjct 122798 TCATTGTAGCAGCAATTTCCGCAGCCAATTCATCCAATTGTACGGTTGTCATACCGGAAT 122739 Query 49060 ATATTCCTTGAATAACTTTCATTGCTATATTTACTGGATCTATATGATCCATATCCAGTC 49119 | | || | ||| |||||||||| || || |||||| ||| |||||||| || | Sbjct 122738 AAAGACCATTAATTACTTTCATTGTAATTTTAGGTGGATCAATAAAATCCATATTCAAAC 122679 Query 49120 CATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCTTTACGAC 49179 ||||||| | |||| ||||| ||||| ||||| || ||||| || | |||| |||| Sbjct 122678 CATAACAAAGTTTTCGAATTCTTGATGTTATTTTGTCGAACATGATTGTTTCTTGTCGAC 122619 Query 49180 CGTCACGTTTTATAACAAACAT 49201 | |||||||| ||||||||||| Sbjct 122618 CATCACGTTTAATAACAAACAT 122597 >seq990 Length=1130841 Score = 114 bits (126), Expect = 1e-20 Identities = 190/269 (71%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 19239 ATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTA 19298 ||| |||| ||||| ||| |||| || || |||||||| || |||| ||||||| |||| Sbjct 1099107 ATCAATCAGCAAACTATACGTTTCAGAGTGGATATTTTCCATCGCCAACTGAAATGCGTA 1099048 Query 19299 AAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAA-TTTTCAT 19357 ||| ||| ||| | | || | || |||| | || |||| ||||| Sbjct 1099047 GAAATCTCTAATTTCAGGGACTTGAAACTCGAGGAAAAAACGA-CGTCCAATGTTTTCTA 1098989 Query 19358 TAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCAT 19417 ||| ||||| ||||| ||||||||||| || | |||| |||||| ||| |||||| | Sbjct 1098988 AAACGATTCCGTCACTTGCTGCAAAAAACGCCAGCACATATTTAATGAAACTTTTTTCGT 1098929 Query 19418 -CTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTC 19476 || | ||| ||||||||||| | ||| | | ||||||| ||||||| | ||| Sbjct 1098928 TCTCATTCAAAT-TATTCCAATCACGCAGGTCTCCATACAAATCTATTTCTTCAGCCGTC 1098870 Query 19477 CAAAAAGAAGCCTCTGCTTTTTTATACAT 19505 |||||| |||| ||| ||| | | |||| Sbjct 1098869 CAAAAACAAGCTTCTTGTTTCTCACACAT 1098841 >seq458 Length=503182 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 17229 ACACCACATATATCTGTAAAATAATTACCTGTCCAATTTGATGTGCCAATATACGCAGTT 17288 ||||||| | ||| ||||||||| | ||| |||||||||||| |||||||| || Sbjct 379080 ACACCACCTGTATTGATAAAATAATCAGCTGACCAATTTGATGTACCAATATAGACAACC 379139 Query 17289 TTATCAGTTACCATGTATTTTGCATGATTTACTCTTGAATAAGGAATAGGTGGATTATT 17347 ||||| || | ||| ||||| |||||| || | |||||| ||||| |||||| || Sbjct 379140 TTATCGGTAATCATATATTTATTATGATTAACACCTGAATATGGAAT---TGGATTTTT 379195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562099511152080