Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 399 3e-106 seq458 93.3 5e-14 >seq1 Length=3593316 Score = 399 bits (442), Expect = 3e-106 Identities = 633/897 (71%), Gaps = 18/897 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| || || ||||||||||||| |||| ||| |||| |||||||||| || ||||| Sbjct 930130 CATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTC 930071 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACT-ACATG 36990 || |||||| | ||||||||||||||||||||| | ||| ||||| || | | ||| Sbjct 930070 TAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATA-ATGTTTTTCACAAT 930012 Query 36991 ATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 |||||| || | | ||| ||| | |||| || || | |||||| || | | Sbjct 930011 CTAATTCAACCAATAAACGATCGGCACAATATTCAATATAATCGGACATTAATTTAGCAT 929952 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | ||||| || | | |||||| | |||||| ||||||| || ||| || | |||| Sbjct 929951 TCATACCGATCAATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACAG 929892 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATAT--TTAAA 37168 |||| ||| || | |||||| || | | ||| ||| | ||||| | ||| Sbjct 929891 CATCAATAATAATTTCAACAATTCGTTGTGATGATGGACGAT--TACGAATATGATGAAA 929834 Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228 ||| | ||| ||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct 929833 CAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAA 929774 Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288 ||| | || ||||||| || | |||||| | |||||| ||||||||||| || || || Sbjct 929773 GGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGA 929714 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC--TA 37346 ||| || || |||||||| || |||||||| | | || || | | || | ||| | Sbjct 929713 AAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAAC--GTTCGGCAAATGTAACCGAA 929656 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACA--TTCAATTGTTT 37404 | ||| |||| | | | ||| | || ||| | ||||| | ||| | Sbjct 929655 TCATCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGT 929596 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 || || || || ||||| | || ||| | || ||| | || ||| |||| ||| | || Sbjct 929595 --ATAGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATA 929538 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | ||||||||| || |||| |||||| ||||| || ||||| ||||||||||| | | Sbjct 929537 ATGAATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTG 929478 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| | || ||| ||||| || ||| | | |||||| ||||||||||| || |||| Sbjct 929477 CTTCTGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCAT 929418 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT--CATTTGATAA 37642 |||| || ||||| ||||| | |||| | || |||||| |||||| | || ||| Sbjct 929417 CACTTGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATT--TAA 929360 Query 37643 TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702 ||| ||||||| || ||| | || ||| ||||| ||||| |||||||| ||| Sbjct 929359 TTTATTCCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGC 929300 Query 37703 CAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 || ||| ||||| ||||||||||||| || ||| |||||||| | ||||| Sbjct 929299 TTCAGCTTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAA 929243 >seq458 Length=503182 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 ||| ||||||||||||||||| || || ||| | ||| || | || | || |||||| Sbjct 379849 GGTATTTTACATACAAAATTTATTATTGTAGATCAAAAAGATTTTTACCTGGGTAGTGCT 379790 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGTAT 153391 |||||||||||| | ||| |||| || ||||||||||| ||||| Sbjct 379789 AATATGGATTGGCGTTCATTAACACATGTAAAAGAATTGGGTAT 379746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592307011964880