Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 399 3e-106
seq458 93.3 5e-14
>seq1
Length=3593316
Score = 399 bits (442), Expect = 3e-106
Identities = 633/897 (71%), Gaps = 18/897 (2%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
||| || || ||||||||||||| |||| ||| |||| |||||||||| || |||||
Sbjct 930130 CATGACACCACTTTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTC 930071
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACT-ACATG 36990
|| |||||| | ||||||||||||||||||||| | ||| ||||| || | | |||
Sbjct 930070 TAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATA-ATGTTTTTCACAAT 930012
Query 36991 ATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050
|||||| || | | ||| ||| | |||| || || | |||||| || | |
Sbjct 930011 CTAATTCAACCAATAAACGATCGGCACAATATTCAATATAATCGGACATTAATTTAGCAT 929952
Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110
| ||||| || | | |||||| | |||||| ||||||| || ||| || | ||||
Sbjct 929951 TCATACCGATCAATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACAG 929892
Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATAT--TTAAA 37168
|||| ||| || | |||||| || | | ||| ||| | ||||| | |||
Sbjct 929891 CATCAATAATAATTTCAACAATTCGTTGTGATGATGGACGAT--TACGAATATGATGAAA 929834
Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228
||| | ||| ||||||||||||||||| |||||||| | ||||||||||| |||||
Sbjct 929833 CAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAA 929774
Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288
||| | || ||||||| || | |||||| | |||||| ||||||||||| || || ||
Sbjct 929773 GGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGA 929714
Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC--TA 37346
||| || || |||||||| || |||||||| | | || || | | || | ||| |
Sbjct 929713 AAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAAC--GTTCGGCAAATGTAACCGAA 929656
Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACA--TTCAATTGTTT 37404
| ||| |||| | | | ||| | || ||| | ||||| | ||| |
Sbjct 929655 TCATCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGT 929596
Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464
|| || || || ||||| | || ||| | || ||| | || ||| |||| ||| | ||
Sbjct 929595 --ATAGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATA 929538
Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524
| ||||||||| || |||| |||||| ||||| || ||||| ||||||||||| | |
Sbjct 929537 ATGAATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTG 929478
Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584
|||| | || ||| ||||| || ||| | | |||||| ||||||||||| || ||||
Sbjct 929477 CTTCTGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCAT 929418
Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT--CATTTGATAA 37642
|||| || ||||| ||||| | |||| | || |||||| |||||| | || |||
Sbjct 929417 CACTTGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATT--TAA 929360
Query 37643 TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702
||| ||||||| || ||| | || ||| ||||| ||||| |||||||| |||
Sbjct 929359 TTTATTCCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGC 929300
Query 37703 CAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759
|| ||| ||||| ||||||||||||| || ||| |||||||| | |||||
Sbjct 929299 TTCAGCTTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAA 929243
>seq458
Length=503182
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347
||| ||||||||||||||||| || || ||| | ||| || | || | || ||||||
Sbjct 379849 GGTATTTTACATACAAAATTTATTATTGTAGATCAAAAAGATTTTTACCTGGGTAGTGCT 379790
Query 153348 AATATGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGGTAT 153391
|||||||||||| | ||| |||| || ||||||||||| |||||
Sbjct 379789 AATATGGATTGGCGTTCATTAACACATGTAAAAGAATTGGGTAT 379746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592307011964880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |