Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 3e-40
seq391 167 2e-36
seq558 98.7 8e-16
>seq1
Length=3593316
Score = 179 bits (198), Expect = 3e-40
Identities = 177/229 (77%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || | |||||| || || ||||| | ||| ||||||||||||||||| ||||| |
Sbjct 1033025 TTCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCG 1033084
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| |||| | |||| || | ||| ||||| ||||| ||||| || || ||||| || |
Sbjct 1033085 ACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTG 1033144
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
|||| ||||||||||| || ||||| ||| ||| |||| | |||||| || | ||| |
Sbjct 1033145 GAATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGA 1033204
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| | ||| | |||||||| || ||||||||||| || || |||||
Sbjct 1033205 CTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 174 bits (192), Expect = 1e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | || ||| || || ||||| | || ||||| ||||| ||||| |||||||
Sbjct 1033255 CCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCGGAC 1033314
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| |||||||| ||||| ||||| ||||| || || ||||| || |||
Sbjct 1033315 AAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGA 1033374
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||||||||||||||| ||| ||| |||| | ||||| || | ||| |||
Sbjct 1033375 ATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCGACT 1033434
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTT 101473
|| | ||||| ||||| || || || |||||||| || || |||||| ||
Sbjct 1033435 TCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCATGATT 1033485
Score = 167 bits (184), Expect = 2e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314
|| || || ||||| | || ||||||||||| || || ||||||| | |||| ||
Sbjct 1031612 CGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGACAATGTTCGACCA 1031671
Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374
|| |||||||| || || ||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct 1031672 TCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGAATACCTTCTTTG 1031731
Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434
||||| |||||| ||| ||| |||| | ||| || || | ||||||||| | ||||
Sbjct 1031732 TCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACTTCCAAGGTGATG 1031791
Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| ||||| || |||||||| || || |||||
Sbjct 1031792 GTTTTACCGGTCAATGTTTTTACGAAAATTTGCAT 1031826
Score = 156 bits (172), Expect = 3e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| | ||| ||||||||||| ||||||||||||| | || | | |||| |||
Sbjct 1031846 ACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCGGATAAGGTACGGCCATCTTCC 1031905
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
||||| ||||| || || |||||||| || ||||| || ||||| ||||| |||||||||
Sbjct 1031906 AATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGA 1031965
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || ||||||| |||| | || || || | || ||||| | ||||| ||||||
Sbjct 1031966 ATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCGACTTCCAAAGTGATCGTTTTA 1032025
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| |||| || || || || || |||||
Sbjct 1032026 CCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 156 bits (172), Expect = 3e-33
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||||||||| ||||| | || ||||| ||||| || |||||||||| | |||||| |
Sbjct 1032067 ACGTAAAACCAAATGCAATGTCGATTCCTTTTGAATGTTGTAATCGGACAAAGTTCTTCC 1032126
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||||||||| || ||||| ||||| || || ||||| || ||||| || |||||
Sbjct 1032127 ATCTTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCCTCTTT 1032186
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| || ||||| ||||||| |||| | || ||||| | || ||||| | || |
Sbjct 1032187 GTCCTGGATTTTGGCTTTTACATTTTCGATCGTATCAGATGGCTCGACTTCCAATGTAAT 1032246
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| ||||| | |||||| || || || |||||
Sbjct 1032247 AGTTTTACCGGTAAGAGTTTTGACGAAAATTTGCAT 1032282
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | ||| || || || | |||||| || ||||||||||| || |||||||| |
Sbjct 1032512 CCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCCGAC 1032571
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||| | |||| || | || || || || || |||||||| || || || || |||
Sbjct 1032572 AATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGTGGA 1032631
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||| ||||| ||||| || ||| |||| | || || || | |||||||
Sbjct 1032632 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCCACT 1032691
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | ||||| || || |||||||| ||||| ||||||||
Sbjct 1032692 TCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
Score = 104 bits (114), Expect = 2e-17
Identities = 101/128 (79%), Gaps = 4/128 (3%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | ||| ||||| || | |||||| |||||||||||||| || |||||||| ||
Sbjct 1032740 CCACCACGTAATCGTAATACGAGATGAAGTGTAGATTCTTTTTGAATGTTGTAATC--CG 1032797
Query 101303 ATA--GTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
||| || | |||| ||||| || ||||||||||| |||||||| || ||||| || |
Sbjct 1032798 ATAGGGTGCGACCATCTTCCAACTGTTTACCTGCAAAAATCAAACGTTGCTGATCTGGTG 1032857
Query 101361 GAATGCCT 101368
| ||||||
Sbjct 1032858 GGATGCCT 1032865
>seq391
Length=841353
Score = 167 bits (184), Expect = 2e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|||||||| | |||| ||||| || | || |||||||| || |||||||| || |
Sbjct 251390 CCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCTGAC 251449
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| |||||| | ||| || ||||| || || ||||| || || || |||||||| ||||||
Sbjct 251450 AAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGCGGA 251509
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| ||||| |||||||| ||| ||| |||| | ||||||| | ||| ||
Sbjct 251510 ATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCTACC 251569
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | | |||| || ||||| ||||||||||||||||||||
Sbjct 251570 TCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301
||||||||| || || || || | ||| | || ||||| ||||| || |||||||| |
Sbjct 250933 TCCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGA 250992
Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361
| || | | |||||| | |||||| || ||||| || || ||||||||||| |||||
Sbjct 250993 CAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGG 251052
Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421
||| ||||||||||| |||||||| ||| || |||| | || || | || ||
Sbjct 251053 AATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTAC 251112
Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||| |||| | |||| || || |||||||||||||| || |||||
Sbjct 251113 TTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
>seq558
Length=611125
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || |||| || || ||||| || || ||||| || |||| || | | |||||
Sbjct 303922 ACCAAGTGAATAGTGGACTCTTTCTGAATGTTGTAGTCCGCGAGCGTGCGTCCGTCGTCG 303863
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || ||||| ||||| ||||| || || ||||||||||| ||||| || ||
Sbjct 303862 AGCTGCTTCCCCGCAAAGATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCTTTGTCCTGG 303803
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || ||| || | || | ||||| | |||||||| || || | | |||
Sbjct 303802 ATCTTAGCTTTGACGCTCTCGATCGTGTCGTTTGGGTCCACTTCGAGCGTTATGTTCTTG 303743
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | || || ||||||||||||||
Sbjct 303742 CCCGTGAGTGTCTTGACAAATATCTGCAT 303714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396272015211954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |