Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq335 282 8e-71
>seq335
Length=939964
Score = 282 bits (312), Expect = 8e-71
Identities = 1003/1542 (65%), Gaps = 53/1542 (3%)
Strand=Plus/Minus
Query 212954 GTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGT 213013
||| || ||||| ||||||| |||| |||||| || ||||| | ||| || ||
Sbjct 180111 GTTCGACGTGTACGGCTCGAACGACTCGCAGTTCCCGAGGATCTGCGAAGTCGACGCCGT 180052
Query 213014 GGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC-CGAA 213072
||||| || || ||||| || ||||| | || |||| || | | || | | | || |
Sbjct 180051 CGGCATCGGCGCGACCAGCAGGCTGTTGCGCAGCCCGTACTTGACCATC-GCCTCGCGCA 179993
Query 213073 GCTCTGCCCAGTCCCATCTGCCAGACAGGTC--------------------CTCGTCCTT 213112
|||| |||||||||| |||| || || | | || | ||
Sbjct 179992 GCTCCTCCCAGTCCCACATGCCCGAGAGCTGAATCTCACGCAAGTTCCGCTCGCGCCGTT 179933
Query 213113 CA-CGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171
| ||||||||| ||| ||||| || |||||| |||| |||| ||| | | | |
Sbjct 179932 CTTCGTTCCACAAGTCGAACTGGAATTTGCCTTCGCTCGCGGGCGAGCCTTCGAAGCTCG 179873
Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231
||| || || |||||||| || |||||| | ||| || || || ||||||| |
Sbjct 179872 CGTACGGCCCGTGCTCCTTCGCGAGCTCGACGCTCGCGGTCACCGCGCCGAAGTAGATCG 179813
Query 213232 TTTCAAATATCTCCCTGTTGAGCTTC-TTGGCCTCTGGGGACGT-GAAGGGCATCATCAT 213289
| || || || | | |||| | |||| || ||||| |||| || ||| |||| | ||
Sbjct 179812 TCTCGAAGATGTTCTTGTTCA-CTTCGTTCGCCTC-GGGGCTGTCGAACGGCAGCCGCAG 179755
Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349
| || | | | || || | || || || ||||||||||| || | ||| | ||||||
Sbjct 179754 CAGCTGCAGCGCGTCCGCGAAGCCTTGCACGCCGATGCCGATCGGCCGGTGCCGCAGGTT 179695
Query 213350 AGACTTGGAGCACTCCTCCAAGGG---GTAAAAGTTGCAGTCGATGATCTTGTTGAGGTT 213406
|| | | ||| | || ||| ||| |||||| | ||||| |||||
Sbjct 179694 GC---TGCGCCGCGCCTTCTCGGTCACGTAGAAGCCCACGTCGATCACGTTGTTCAGGTT 179638
Query 213407 GCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCC-CGT 213465
| || | | || | ||| | | ||| | ||||| ||||| || || | ||
Sbjct 179637 CTGCGTCACGATCTTCGCGACCTCGAACAGCTTCTCGTAGTTGAAG-CGCCGCTTCTCGA 179579
Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT-GAGAG 213524
| | ||| || | ||||| | | || |||||||| || || | ||||| | | |
Sbjct 179578 CGTCCACGTACGCGGGCAGCGACAGCGACGCGAGGTTGCACACCGCGATCTCCTCGCGCG 179519
Query 213525 TCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGG 213584
| ||||||| || | || ||||||||||| | | |||||||||| |||||| |
Sbjct 179518 AC-GTGTACTGCACCACTTCCGTGCACAGGTTCGAGGACTGGATGGTGCCGAGGTTCCGC 179460
Query 213585 TGGTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643
||||| ||||| ||| | ||| | |||||||| | || ||| || || ||||| |
Sbjct 179459 TGGTTCGACTT-GCGGTTGCACGCGTCCTTGTACACCAAGTACGGATTGCCCGTCTCGAT 179401
Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703
||| | || || ||||||| | ||||| ||| |||| || ||| |
Sbjct 179400 CTGCGTGTTCACAATGACCGTCCAGAGCGCGCGCGCCTTCACCTGCCGCACGA-AGCGCT 179342
Query 213704 GGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAG 213763
| || |||||||| | ||| ||| ||| ||| || ||||||||| | ||
Sbjct 179341 GCTCG--GCCTCGTAGCGCGTGTACAGCGCGTCGAACTCCGCGCCCCAGACTTCGAACAA 179284
Query 213764 TCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCAT 213823
||||| | ||||||||||| || ||||| | ||||| || || | ||||
Sbjct 179283 GCCCGGCGACTGCGCGGGACACATCAGACTCCACACGCCGTCTTCGTCCACGCGGCGCAT 179224
Query 213824 GAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCC 213883
||||| ||| || ||||| | ||| ||||||| || | | ||| || ||
Sbjct 179223 GAACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCGCGTGCGCAACTCTTCGTTGCC 179164
Query 213884 AGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943
||| ||||| || | || || |||||||| |||||||||||||||| ||||||
Sbjct 179163 GTGGTTGCGCCGCAGCTCGATGAACTCGAAGATGTCTGCGTGCCACGGCTCCAGGTAGAT 179104
Query 213944 GGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAA 214000
|| ||| |||| | ||| |||||||||||| || | || | ||||||
Sbjct 179103 CGCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCGGTCGCGTTGAA 179044
Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060
| |||||| | || || | ||||||| | ||||| || ||||| || |||| |
Sbjct 179043 CACGCGCAGCATCGGCACGATCCCGTTGCTGCGCCCGTTCGTGCCCGCGATGTACGCGTT 178984
Query 214061 GGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGC 214120
| || | | ||| || | |||||| || || || ||||||||| ||||| ||
Sbjct 178983 CGTCGCGCGGATCTTGTGGATCGCGAGCCCGATCCCGCCAGCGTACTTGCTGATCACCGC 178924
Query 214121 GCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAA 214180
||| | ||| || || | ||||| | || ||| || | | | ||||| ||
Sbjct 178923 GCACTCCTTCAGCGTGTCGAAAATGCCCTCGATCGAGTCGTCGGCCATCTGCAGCAGAAA 178864
Query 214181 GCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGAT 214240
|||||| |||||||| ||| | || | |||||| ||||| || | || |||||
Sbjct 178863 GCAGCTGGAGAGCTGTTGCCGCTTCAGCCCGGCGTTGAACAGCGTCGGCGTCGCGTGGAT 178804
Query 214241 CATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTG 214300
| ||||||| | || | |||| ||| ||||||| | || | |||| | |||
Sbjct 178803 GAAAAACTTGCTCGACATCAGCCGGTACGTCTCCAAAATCCGCGGCAAGTCGCCCAAGTG 178744
Query 214301 GATCTGTAGAGCG-CAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGG 214358
|||| || || ||| | ||| | ||||| ||| |||| ||| | | || ||| |
Sbjct 178743 GATC--GCGACCGACACGCGCATGAACATGTACTGCGGCCGCTCGA-CGATCTTTTTGTT 178687
Query 214359 C-CCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATC 214417
| |||| |||||||| |||||||| || |||||||| || |||||| | | ||
Sbjct 178686 CGCCTTCAGCAGGTACGAGCGCTCGAGCGTCTTGAAGCCGAAGTAGTCGAACTCGAAGTC 178627
Query 214418 GTTC-CCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGCT 214458
|||| ||| | | || || ||||||||||| | |||||||
Sbjct 178626 GTTCGCCGAG-ACGATCGCCGCGTCCAGCTCCGCGGCGTGCT 178586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931517406420480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |