Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq335 170 4e-37 >seq335 Length=939964 Score = 170 bits (188), Expect = 4e-37 Identities = 808/1259 (64%), Gaps = 51/1259 (4%) Strand=Plus/Minus Query 221431 GTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT-GAAGGGCA 221489 |||||| ||||| ||||| ||||||| | | || |||||||| | || ||| |||| Sbjct 179820 GTAGATCGTCTCGAAGATGTTCTTGTTCACTTCGTTCGCCTCGGG-GCTGTCGAACGGCA 179762 Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549 ||||||| ||| | |||| || | || || || ||||| ||||| |||| ||| | Sbjct 179761 GCCGCAGCAGCTGCAGCGCGTCCGCGAAGCCTTGCACGCCGATGCCGATCGGCCGGTGCC 179702 Query 221550 TCCTGTTGGAA-GCGGCCGCTTCTGG--CACGGGATAAAAGTTGACGTCGATCAGATTGT 221606 | |||| || || ||||| | |||| || ||| |||||||||| |||| Sbjct 179701 GCAGGTTGCTGCGCCGCGCCTTCTCGGTCACG---TAGAAGCCCACGTCGATCACGTTGT 179645 Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666 | |||||| | || | || || | |||||| |||||||| || ||||| Sbjct 179644 TCAGGTTCTGCGTCACGATCTTCGCGACCTCGAACAGCTTCTCGTAGTTGAAG------- 179592 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGG-CAACGCTGGCCAGGTTACAC 221725 |||||| || | || | ||||| | ||| || | || || | | ||||| ||| Sbjct 179591 CGCCGCT-TC-TCGACG---TCCACGTACGCGGGCAGCGACAGCGACG-CGAGGTTGCAC 179538 Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785 || || | ||| || || ||||| | | || || || ||||| | ||| | Sbjct 179537 ACCGCGATCTCCTCGCGCGACGTGTACTGCACCACTTCCGTGCACAGGTTCGAGGACTGG 179478 Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845 ||||| || |||| || || |||||||| ||| ||||||||||| | || | Sbjct 179477 ATGGTGCCGAGGTTCCGCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTACACCAAGTAC 179418 Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACC 221905 ||| ||| ||||| | ||| | || ||| |||||| | | || ||||| Sbjct 179417 GGATTGCCCGTCTCGATCTGCGTGTTCACAATGACCGTCCAGAGCGCGCGCGCCTTCACC 179358 Query 221906 GTCCTCTTGACTGCACC-CTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTC 221964 || | || || | ||||| || | || | || || ||| ||| |||| | Sbjct 179357 TGCCGCACGAA-GCGCTGCTCGGCCT---CGTAGCGCGTGTACAGCGCGTCGAACTCCGC 179302 Query 221965 ACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTT 222024 || | | ||| || ||| || || |||||||||||||||||||| | | Sbjct 179301 GCCCCAGACTTCGAACAAGCCCGGCGACTGCGCGGGACACATCAGACTCCA---CACGCC 179245 Query 222025 GTCTTTGACC---CTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 ||||| | || | ||||||| | ||| ||| ||||| || | ||||| || | Sbjct 179244 GTCTTCGTCCACGCGGCGCATGAACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCG 179185 Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141 || ||| ||| || ||||| ||| || ||| || | ||||| || ||||| || Sbjct 179184 CGTGCGCAACTCTTCGTTGCCGTGGTTGCGCCGCAGCTCGATGAACTCGAAGATGTCTGC 179125 Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 ||||||||||||||| |||| || | |||| |||||| ||| ||||| || || Sbjct 179124 GTGCCACGGCTCCAGGTAGATCGCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGGTCGAC 179065 Query 222202 CATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261 | | | |||||||| | ||| || |||| || | |||||| || ||||| Sbjct 179064 GTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGGCACGATCCCGTTGCTGCGCCCGTT 179005 Query 222262 GGTGCCCTTAATGTACGC-ACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCAC 222320 |||||| |||||||| || | || | | || | | | ||||| || | Sbjct 179004 CGTGCCCGCGATGTACGCGTTCGTC-GCGCGGATCTTGTGGATCGCGAGCCCGATCCCGC 178946 Query 222321 CGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGT 222380 | |||| || ||||| ||||| ||| || ||||| | |||||||| || |||| Sbjct 178945 CAGCGTACTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGAAAATGCCCTCGATCGAGT 178886 Query 222381 CCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACA----GGCG 222436 | || | | ||||||||| || || | ||| ||| | || |||| Sbjct 178885 CGTCGGCCATCTGCAGCAGAAAGCAGCTGGAGAGCTG----TTGCCGCTTCAGCCCGGCG 178830 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496 || |||||||| || | ||||| | || | || |||||||| ||||||||| Sbjct 178829 TTGAACAGCGTCGGCGTCGCGTGGATGAAAAACTTGCTCGACATCAGCCGGTACGTCTCC 178770 Query 222497 ACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGG 222556 | | | | | || | || ||| ||| | | | |||| |||||||||| Sbjct 178769 AAAATCCGCGGCAAGTCGCCCAAGTGGATCGCGACCGACACGCGCATGAACATGTACTGC 178710 Query 222557 GGCCTCTCCACAGGACCCTTGGAGCTGG---AGAGCAGGTACGATTTTTCCAGAGTCTTG 222613 |||| ||| || || ||| | | | ||||||||||| || || |||||| Sbjct 178709 GGCCGCTCGAC--GA-TCTTTTTGTTCGCCTTCAGCAGGTACGAGCGCTCGAGCGTCTTG 178653 Query 222614 AACCCAAAGTAGTTGAGGTCAAAGTC-TCTGCCGTGAACCACGGCGGCGTCCAGCTCCG 222671 || || ||||||| || || ||||| | |||| | || | || ||||||||||||| Sbjct 178652 AAGCCGAAGTAGTCGAACTCGAAGTCGTTCGCCGAG-ACGATCGCCGCGTCCAGCTCCG 178595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928829450839680