Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq335 170 4e-37
>seq335
Length=939964
Score = 170 bits (188), Expect = 4e-37
Identities = 808/1259 (64%), Gaps = 51/1259 (4%)
Strand=Plus/Minus
Query 221431 GTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT-GAAGGGCA 221489
|||||| ||||| ||||| ||||||| | | || |||||||| | || ||| ||||
Sbjct 179820 GTAGATCGTCTCGAAGATGTTCTTGTTCACTTCGTTCGCCTCGGG-GCTGTCGAACGGCA 179762
Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549
||||||| ||| | |||| || | || || || ||||| ||||| |||| ||| |
Sbjct 179761 GCCGCAGCAGCTGCAGCGCGTCCGCGAAGCCTTGCACGCCGATGCCGATCGGCCGGTGCC 179702
Query 221550 TCCTGTTGGAA-GCGGCCGCTTCTGG--CACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
| |||| || || ||||| | |||| || ||| |||||||||| ||||
Sbjct 179701 GCAGGTTGCTGCGCCGCGCCTTCTCGGTCACG---TAGAAGCCCACGTCGATCACGTTGT 179645
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
| |||||| | || | || || | |||||| |||||||| || |||||
Sbjct 179644 TCAGGTTCTGCGTCACGATCTTCGCGACCTCGAACAGCTTCTCGTAGTTGAAG------- 179592
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGG-CAACGCTGGCCAGGTTACAC 221725
|||||| || | || | ||||| | ||| || | || || | | ||||| |||
Sbjct 179591 CGCCGCT-TC-TCGACG---TCCACGTACGCGGGCAGCGACAGCGACG-CGAGGTTGCAC 179538
Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785
|| || | ||| || || ||||| | | || || || ||||| | ||| |
Sbjct 179537 ACCGCGATCTCCTCGCGCGACGTGTACTGCACCACTTCCGTGCACAGGTTCGAGGACTGG 179478
Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845
||||| || |||| || || |||||||| ||| ||||||||||| | || |
Sbjct 179477 ATGGTGCCGAGGTTCCGCTGGTTCGACTTGCGGTTGCACGCGTCCTTGTACACCAAGTAC 179418
Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACC 221905
||| ||| ||||| | ||| | || ||| |||||| | | || |||||
Sbjct 179417 GGATTGCCCGTCTCGATCTGCGTGTTCACAATGACCGTCCAGAGCGCGCGCGCCTTCACC 179358
Query 221906 GTCCTCTTGACTGCACC-CTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTC 221964
|| | || || | ||||| || | || | || || ||| ||| |||| |
Sbjct 179357 TGCCGCACGAA-GCGCTGCTCGGCCT---CGTAGCGCGTGTACAGCGCGTCGAACTCCGC 179302
Query 221965 ACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTT 222024
|| | | ||| || ||| || || |||||||||||||||||||| | |
Sbjct 179301 GCCCCAGACTTCGAACAAGCCCGGCGACTGCGCGGGACACATCAGACTCCA---CACGCC 179245
Query 222025 GTCTTTGACC---CTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081
||||| | || | ||||||| | ||| ||| ||||| || | ||||| || |
Sbjct 179244 GTCTTCGTCCACGCGGCGCATGAACAAGTCGTTGATGTACAGCCCCAGGAAGAGGTCCCG 179185
Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141
|| ||| ||| || ||||| ||| || ||| || | ||||| || ||||| ||
Sbjct 179184 CGTGCGCAACTCTTCGTTGCCGTGGTTGCGCCGCAGCTCGATGAACTCGAAGATGTCTGC 179125
Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
||||||||||||||| |||| || | |||| |||||| ||| ||||| || ||
Sbjct 179124 GTGCCACGGCTCCAGGTAGATCGCGAAGCCGCCTTTGCGCTTGCCGCCGCCCTGGTCGAC 179065
Query 222202 CATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261
| | | |||||||| | ||| || |||| || | |||||| || |||||
Sbjct 179064 GTAGCGCGCGGTCGCGTTGAACACGCGCAGCATCGGCACGATCCCGTTGCTGCGCCCGTT 179005
Query 222262 GGTGCCCTTAATGTACGC-ACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCAC 222320
|||||| |||||||| || | || | | || | | | ||||| || |
Sbjct 179004 CGTGCCCGCGATGTACGCGTTCGTC-GCGCGGATCTTGTGGATCGCGAGCCCGATCCCGC 178946
Query 222321 CGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGT 222380
| |||| || ||||| ||||| ||| || ||||| | |||||||| || ||||
Sbjct 178945 CAGCGTACTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGAAAATGCCCTCGATCGAGT 178886
Query 222381 CCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACA----GGCG 222436
| || | | ||||||||| || || | ||| ||| | || ||||
Sbjct 178885 CGTCGGCCATCTGCAGCAGAAAGCAGCTGGAGAGCTG----TTGCCGCTTCAGCCCGGCG 178830
Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496
|| |||||||| || | ||||| | || | || |||||||| |||||||||
Sbjct 178829 TTGAACAGCGTCGGCGTCGCGTGGATGAAAAACTTGCTCGACATCAGCCGGTACGTCTCC 178770
Query 222497 ACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGG 222556
| | | | | || | || ||| ||| | | | |||| ||||||||||
Sbjct 178769 AAAATCCGCGGCAAGTCGCCCAAGTGGATCGCGACCGACACGCGCATGAACATGTACTGC 178710
Query 222557 GGCCTCTCCACAGGACCCTTGGAGCTGG---AGAGCAGGTACGATTTTTCCAGAGTCTTG 222613
|||| ||| || || ||| | | | ||||||||||| || || ||||||
Sbjct 178709 GGCCGCTCGAC--GA-TCTTTTTGTTCGCCTTCAGCAGGTACGAGCGCTCGAGCGTCTTG 178653
Query 222614 AACCCAAAGTAGTTGAGGTCAAAGTC-TCTGCCGTGAACCACGGCGGCGTCCAGCTCCG 222671
|| || ||||||| || || ||||| | |||| | || | || |||||||||||||
Sbjct 178652 AAGCCGAAGTAGTCGAACTCGAAGTCGTTCGCCGAG-ACGATCGCCGCGTCCAGCTCCG 178595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928829450839680
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