Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq435 178 1e-39
>seq435
Length=2731825
Score = 178 bits (196), Expect = 1e-39
Identities = 531/806 (66%), Gaps = 39/806 (5%)
Strand=Plus/Minus
Query 138172 GATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGA 138231
|||||||| ||| |||| ||||| | || || || ||||| |||||||| ||||| |
Sbjct 127165 GATGTTTTTTTACTGCAATTGGACCCATTCCTGGTCCACCACCACCATGTGGTATACAAA 127106
Query 138232 ATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGAC 138291
| || ||||||| ||||| ||| | ||||| |||||| |||| ||| || |
Sbjct 127105 AAGTTTTATGTAGATTTAAATGCGAAACATCACTACCATAATCACCTGGACGACAAAGTC 127046
Query 138292 CTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACC---ACCATTGTCATGAA 138348
| ||||||||||| | |||||||||||| | |||||| || | |||| ||||||
Sbjct 127045 CAACCTGTGCATTCATATTTGCACCATCTAAATATACTTGTGCTGAACCA----CATGAA 126990
Query 138349 CG----ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATAT 138404
| || | ||| || | ||||| | | |||||||||||| || |||||||||
Sbjct 126989 TGTATCATTTCACAAATATCGCTGATATCTTCATCAAATACACCAAATGTTGATGGATAT 126930
Query 138405 GTAATCATAATACATGAGA---GTTC---AAATGTATTCATGATTGCTTTCTTCTCTAGA 138458
|| ||||| | ||| | | | || || | ||| || | |||||| | |
Sbjct 126929 GTTATCATTAAACAGGCAATCTGATCATGAAGTTTATCCAATTTAGCTTTC------AAA 126876
Query 138459 TCTTTGATGTCTATGTTGCCATCATCATCACACT-TGACA---CCTACAACTTTCATTCC 138514
| | | || || | |||| | | ||| ||| ||||| | | ||
Sbjct 126875 TGTGCTTTATCGATACTACCAT-TTTTTAGTACTAAAACAGGCTCTACACGT---AAACC 126820
Query 138515 TGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATT 138574
|||||| |||||| || ||||| |||||||||||||| | || |||| ||||| |||
Sbjct 126819 TGCCATATTTGCACTGGCTGGATTGGTTCCATGTGCTGAAACCGGAATCAAACATATATT 126760
Query 138575 TCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAAC--AGTCCTGCATAC 138632
|| | | | || ||| | || | ||||||||| || ||| | ||| |||||
Sbjct 126759 TCGATAACCTTCACCTTGTGATTCAAGATATGCTTTTAT--ACAACGTAATCCAGCATAT 126702
Query 138633 TCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACAT 138692
||||| || | || | || ||||| ||||||| | |||| |||| || | |||||
Sbjct 126701 TCACCTTGAGCACCAGAATTCGGTTGAAATGATACACTATCATAACCGGTCAATTCACAA 126642
Query 138693 AACCATTTCTGTAAGTCATCTATTATCTTTTGATAACCCATGGTCTGT-ATCATAGGTGT 138751
| || | || |||| || | ||||||||| | | ||| || | || |
Sbjct 126641 AGATCTTGTTCCAATTCATTAATAAGTACTTGATAACCTTTAGCTTGTGATGGT-GGAAT 126583
Query 138752 ATGTGGATGCACGTTGGCAAATTCTTCCCATGACACA-GGCATCAGTTCTGCTGCTGCAT 138810
|| |||||| || | || ||| | |||||| ||| || |||| ||| | | |||||
Sbjct 126582 ATATGGATGTACATCGGTTAATGTTGGCCATGA-ACATGGTATCATTTCAGTGGTTGCAT 126524
Query 138811 TTAGTTTCATTGTGCAACTACCAAGTGGAACCATACCATTTACTAATGAGAAATCTTTAG 138870
| | ||||||||| || || | ||| | ||| || ||||||||| | |||||||
Sbjct 126523 TCAATTTCATTGTACATGATCCTAATGGTATCATTGAATGTACTAATGACATATCTTTAT 126464
Query 138871 AGCATAACTCATAGATATATCTCATCATGTCAGTTTCACTGTGATACTTATTGAATACTT 138930
||| | ||||| | || | | |||||||| ||||| ||||||||| |
Sbjct 126463 TTTCTAATCTTTTCATATAACGAATAAGATTTGTTTCACTATGATATGTATTGAATAATG 126404
Query 138931 CCTGAGTCAACCATGGTTTAGTTCTT 138956
|| || || ||||| | |||||
Sbjct 126403 GATGTGTTAAGAATGGTGTTTTTCTT 126378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578988832051440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |