Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq435 178 1e-39 >seq435 Length=2731825 Score = 178 bits (196), Expect = 1e-39 Identities = 531/806 (66%), Gaps = 39/806 (5%) Strand=Plus/Minus Query 138172 GATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGA 138231 |||||||| ||| |||| ||||| | || || || ||||| |||||||| ||||| | Sbjct 127165 GATGTTTTTTTACTGCAATTGGACCCATTCCTGGTCCACCACCACCATGTGGTATACAAA 127106 Query 138232 ATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGAC 138291 | || ||||||| ||||| ||| | ||||| |||||| |||| ||| || | Sbjct 127105 AAGTTTTATGTAGATTTAAATGCGAAACATCACTACCATAATCACCTGGACGACAAAGTC 127046 Query 138292 CTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACC---ACCATTGTCATGAA 138348 | ||||||||||| | |||||||||||| | |||||| || | |||| |||||| Sbjct 127045 CAACCTGTGCATTCATATTTGCACCATCTAAATATACTTGTGCTGAACCA----CATGAA 126990 Query 138349 CG----ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATAT 138404 | || | ||| || | ||||| | | |||||||||||| || ||||||||| Sbjct 126989 TGTATCATTTCACAAATATCGCTGATATCTTCATCAAATACACCAAATGTTGATGGATAT 126930 Query 138405 GTAATCATAATACATGAGA---GTTC---AAATGTATTCATGATTGCTTTCTTCTCTAGA 138458 || ||||| | ||| | | | || || | ||| || | |||||| | | Sbjct 126929 GTTATCATTAAACAGGCAATCTGATCATGAAGTTTATCCAATTTAGCTTTC------AAA 126876 Query 138459 TCTTTGATGTCTATGTTGCCATCATCATCACACT-TGACA---CCTACAACTTTCATTCC 138514 | | | || || | |||| | | ||| ||| ||||| | | || Sbjct 126875 TGTGCTTTATCGATACTACCAT-TTTTTAGTACTAAAACAGGCTCTACACGT---AAACC 126820 Query 138515 TGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATT 138574 |||||| |||||| || ||||| |||||||||||||| | || |||| ||||| ||| Sbjct 126819 TGCCATATTTGCACTGGCTGGATTGGTTCCATGTGCTGAAACCGGAATCAAACATATATT 126760 Query 138575 TCTTTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAAC--AGTCCTGCATAC 138632 || | | | || ||| | || | ||||||||| || ||| | ||| ||||| Sbjct 126759 TCGATAACCTTCACCTTGTGATTCAAGATATGCTTTTAT--ACAACGTAATCCAGCATAT 126702 Query 138633 TCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACAT 138692 ||||| || | || | || ||||| ||||||| | |||| |||| || | ||||| Sbjct 126701 TCACCTTGAGCACCAGAATTCGGTTGAAATGATACACTATCATAACCGGTCAATTCACAA 126642 Query 138693 AACCATTTCTGTAAGTCATCTATTATCTTTTGATAACCCATGGTCTGT-ATCATAGGTGT 138751 | || | || |||| || | ||||||||| | | ||| || | || | Sbjct 126641 AGATCTTGTTCCAATTCATTAATAAGTACTTGATAACCTTTAGCTTGTGATGGT-GGAAT 126583 Query 138752 ATGTGGATGCACGTTGGCAAATTCTTCCCATGACACA-GGCATCAGTTCTGCTGCTGCAT 138810 || |||||| || | || ||| | |||||| ||| || |||| ||| | | ||||| Sbjct 126582 ATATGGATGTACATCGGTTAATGTTGGCCATGA-ACATGGTATCATTTCAGTGGTTGCAT 126524 Query 138811 TTAGTTTCATTGTGCAACTACCAAGTGGAACCATACCATTTACTAATGAGAAATCTTTAG 138870 | | ||||||||| || || | ||| | ||| || ||||||||| | ||||||| Sbjct 126523 TCAATTTCATTGTACATGATCCTAATGGTATCATTGAATGTACTAATGACATATCTTTAT 126464 Query 138871 AGCATAACTCATAGATATATCTCATCATGTCAGTTTCACTGTGATACTTATTGAATACTT 138930 ||| | ||||| | || | | |||||||| ||||| ||||||||| | Sbjct 126463 TTTCTAATCTTTTCATATAACGAATAAGATTTGTTTCACTATGATATGTATTGAATAATG 126404 Query 138931 CCTGAGTCAACCATGGTTTAGTTCTT 138956 || || || ||||| | ||||| Sbjct 126403 GATGTGTTAAGAATGGTGTTTTTCTT 126378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578988832051440