Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1212 214 2e-50 >seq1212 Length=1133891 Score = 214 bits (236), Expect = 2e-50 Identities = 334/476 (70%), Gaps = 4/476 (1%) Strand=Plus/Minus Query 47693 TACCAACTTCATCAAGACCAGAACCTTCCCATCTAATATTCATATCAAAATAAGGTGCAG 47752 |||||||||||| ||||||| ||||||||| | || | |||||| || || Sbjct 1008365 TACCAACTTCATTAAGACCATTACCTTCCCAAATGATTTCTCTATCAATATGTTTGAAAG 1008306 Query 47753 ATTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAG 47812 | || ||||| | ||| || |||| | | || || ||||| |||||||| || | Sbjct 1008305 CTGATTCGACAAATTCACGAACTGAATGTGCTTCACCGGTTGCAATGACAAAATCTTCCG 1008246 Query 47813 GTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGT 47872 | | ||||||||| | |||||||||||| || || |||||||| | ||||| ||||| | Sbjct 1008245 GATTTTCTTGTTGTAACATTAACCACATGGCTTCAACATAATCACGTGCATGGCCCCAAT 1008186 Query 47873 CACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG--ATTGC 47930 | || || ||| | ||| || | | | | ||||| | || ||| ||| Sbjct 1008185 CTCGTTTTGAATCCAAATTACCCAATTCGATGAATTCTTGTCGA--TTAAGAACAATTTT 1008128 Query 47931 TTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATG 47990 | | | | |||||||||||| || ||||| |||||||||||||| || |||||||| Sbjct 1008127 TGCCACACCACGTGTAATCTTACGTGTGACAAATGTTTCACCACGTCTAGGTGATTCATG 1008068 Query 47991 ATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTAT 48050 ||| || ||||||||| | |||| ||||| | || | ||||||||| || || || Sbjct 1008067 ATTGAATAGAATACCATTGACGGCAAACATTTCATAAGCTTCACGATAATTGACAACAAT 1008008 Query 48051 CCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTC 48110 ||| || || | |||||||||||| || ||||| |||||||| || ||||| || || Sbjct 1008007 CCAATAGGCAAATGATTTTGCAACACCGTATGGAGATCGTGGATAAAATGGTGTTGTTTC 1007948 Query 48111 TGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 || || ||||| || |||||||| | ||| || ||||||||||| Sbjct 1007947 ACGTTGCGGTACTTCTTGTACTTTACCATACAATTCTGAAGTACTTGCTTGATAGA 1007892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665483402705040