Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq1212 214 2e-50
>seq1212
Length=1133891
Score = 214 bits (236), Expect = 2e-50
Identities = 334/476 (70%), Gaps = 4/476 (1%)
Strand=Plus/Minus
Query 47693 TACCAACTTCATCAAGACCAGAACCTTCCCATCTAATATTCATATCAAAATAAGGTGCAG 47752
|||||||||||| ||||||| ||||||||| | || | |||||| || ||
Sbjct 1008365 TACCAACTTCATTAAGACCATTACCTTCCCAAATGATTTCTCTATCAATATGTTTGAAAG 1008306
Query 47753 ATTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAG 47812
| || ||||| | ||| || |||| | | || || ||||| |||||||| || |
Sbjct 1008305 CTGATTCGACAAATTCACGAACTGAATGTGCTTCACCGGTTGCAATGACAAAATCTTCCG 1008246
Query 47813 GTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGT 47872
| | ||||||||| | |||||||||||| || || |||||||| | ||||| ||||| |
Sbjct 1008245 GATTTTCTTGTTGTAACATTAACCACATGGCTTCAACATAATCACGTGCATGGCCCCAAT 1008186
Query 47873 CACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG--ATTGC 47930
| || || ||| | ||| || | | | | ||||| | || ||| |||
Sbjct 1008185 CTCGTTTTGAATCCAAATTACCCAATTCGATGAATTCTTGTCGA--TTAAGAACAATTTT 1008128
Query 47931 TTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATG 47990
| | | | |||||||||||| || ||||| |||||||||||||| || ||||||||
Sbjct 1008127 TGCCACACCACGTGTAATCTTACGTGTGACAAATGTTTCACCACGTCTAGGTGATTCATG 1008068
Query 47991 ATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTAT 48050
||| || ||||||||| | |||| ||||| | || | ||||||||| || || ||
Sbjct 1008067 ATTGAATAGAATACCATTGACGGCAAACATTTCATAAGCTTCACGATAATTGACAACAAT 1008008
Query 48051 CCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTC 48110
||| || || | |||||||||||| || ||||| |||||||| || ||||| || ||
Sbjct 1008007 CCAATAGGCAAATGATTTTGCAACACCGTATGGAGATCGTGGATAAAATGGTGTTGTTTC 1007948
Query 48111 TGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166
|| || ||||| || |||||||| | ||| || |||||||||||
Sbjct 1007947 ACGTTGCGGTACTTCTTGTACTTTACCATACAATTCTGAAGTACTTGCTTGATAGA 1007892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665483402705040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |