Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq569 188 9e-43
seq1 170 2e-37
seq1101 89.7 6e-13
seq768 84.2 3e-11
>seq569
Length=351751
Score = 188 bits (208), Expect = 9e-43
Identities = 467/699 (67%), Gaps = 16/699 (2%)
Strand=Plus/Plus
Query 75897 CACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTA 75956
|||| | || || || || ||||||||| | ||||| ||| |||||| || |
Sbjct 123856 CACAAATTGAAACCGGTACTCCATATATGTTATACAAAGATCATTGTAATCGTAAATCAA 123915
Query 75957 ACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACA 76016
| ||| | ||| | || ||||| || | ||||||||||| || |||||| | || ||
Sbjct 123916 ATCAACAAAATCTTGGTACAATTAAATGTTCAAATCTTTGTACAGAAATTGTTGAATATT 123975
Query 76017 CAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA 76076
|| ||||| ||| || || ||||| ||||| || | | ||| | |||
Sbjct 123976 CATCACCAGATGAAGTGGCCGTATGTAATTTAGCATCGATTTCATTACCACGTTTTGTTG 124035
Query 76077 ATGAAGAGACTCGCAC-TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACC 76135
|| || | ||||| | |||||||||||||||||| | |||| || | | ||
Sbjct 124036 ATCAA-AAACTCGGTCAATTTGATTATGAAAAACTTAAAAAAATTGTTAAAGTAATGACA 124094
Query 76136 AAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAG 76192
|||||| ||||| | | ||||| | |||| |||||| | |||| | ||
Sbjct 124095 AAAAATTTAAACAAAATTATTGATGGTAATTATTATCCATTACCGGAGA---CAAGACTT 124151
Query 76193 TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT 76252
|| ||| | || || |||||||||| | ||||| |||||| | || |||| ||| | |
Sbjct 124152 TCAAATTTACGTCATCGACCTATTGGACTTGGTGTACAAGGTTTAGCCGATGCATTCAGT 124211
Query 76253 TTGTGCCGCTACGCATTTGATTCAGAT--GAAGCCAAGGAGATGAATGCTCGTATCTTTG 76310
| | || || ||| ||| || | ||||| || | |||||| | || ||||
Sbjct 124212 CTATTACGTTATCCATATGA--AAGTTTGGAAGCAAAAAAAATGAATATCCAAATATTTG 124269
Query 76311 AAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCT 76370
|||| || ||| | | | |||| || ||||||||||| || ||| | ||| | |
Sbjct 124270 AAACAATTTATTATGGTGCATTGGAAGCAAGTTGTGAATTAGCAGAACAATATGGTCCAT 124329
Query 76371 ATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAG 76430
|||| || | | | || || || | || |||| | || || | |||||||||| |
Sbjct 124330 ATGAAACTTATCAAGGATCACCAGTATCAAAAGGTATTCTACAATATGATATGTGGAATC 124389
Query 76431 GTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGG 76488
|| | ||||| | | || | | ||| || | || ||| || | | ||
Sbjct 124390 GT-ACACCAA-CCGATCTTTGGAATTGGTCTGAATTGAAAGAAAAAATTTCCAAATATGG 124447
Query 76489 TCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 76548
| |||| || ||| | ||| | ||||||||||||||||| || ||||||||||| | ||
Sbjct 124448 TATTCGAAATAGTTTATTGGTTGCACCAATGCCAACAGCATCAACCGCACAAATTCTTGG 124507
Query 76549 TAATAATGAATGCTTTGAACCATACACAACAAACATCTA 76587
||||||||||| ||||||||||| ||| |||| |||||
Sbjct 124508 TAATAATGAATCATTTGAACCATATACATCAAATATCTA 124546
>seq1
Length=3593316
Score = 170 bits (188), Expect = 2e-37
Identities = 475/721 (66%), Gaps = 16/721 (2%)
Strand=Plus/Plus
Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935
||||| |||||||| ||||||| | || |||||||||||||| ||| ||||||| |
Sbjct 3537114 TTTGGTTTGCTATTCTTGAATCACAAATCGAAACTGGAACACCATACATGGTTTACAAAG 3537173
Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995
|| |||||| || || ||| | ||| | || |||||||| | || |||||||
Sbjct 3537174 ATCATTGTAATCGAAAATCAAATCAACAAAATCTCGGTACAATCAAATGTTCGAATCTTT 3537233
Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055
| || |||||| | || || || ||| ||||| || || || ||| | || ||||
Sbjct 3537234 GTACCGAAATTGTGGAATATTCATCTAAAGATGAAGTAGCCGTCTGTAATCTAGCTTCAA 3537293
Query 76056 TCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATG 76115
|||| | || | ||| || | | | || | ||||||| ||||||| ||
Sbjct 3537294 TCGCATTGAATAAATTTGTTGATCCAAAAAAACGAATCTTTGATTTTGAAAAA----TTG 3537349
Query 76116 AAATCACA-----AAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTA 76170
||||| || ||| |||| || ||||| || ||| || ||| | || ||
Sbjct 3537350 AAATC-CATTGTCAAGGTTGTAACTCGTAATCTGGACAAAGTTATCGACGTGACTTACTA 3537408
Query 76171 TCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTC 76229
||| || ||| || | | || ||| | || || |||| || || | |||||||
Sbjct 3537409 TCCTGTACCAGA-AGCTCAACGTTCGAATCTTCGTCATCGACCAATGGGAATCGGTGTTC 3537467
Query 76230 AAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGG 76289
|||| | || |||| ||||||||| || || |||| ||| || |||||
Sbjct 3537468 AAGGATTAGCAGATGCGTTTATTTTGATGCGTTATCCATTCGATAGTGAAGAAGCTCGAT 3537527
Query 76290 AGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAAT 76349
| | ||| || || |||||||| || ||| | | ||| | || ||||||||||||
Sbjct 3537528 TGCTCAATATTCAGATTTTTGAAACAATTTATTATGGATCATTAGAAACGAGTTGTGAAT 3537587
Query 76350 TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGC 76409
| || ||| ||||| ||||| || | ||| || || || | || |||| | |
Sbjct 3537588 TAGCCCAAGAAAAAGGTCAATATGAAACTTATGAAGGATCACCAGTATCTAAAGGCATTC 3537647
Query 76410 TTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTACGACTGGGATGTTCTCAA 76467
| ||||||||||||| |||| |||||| || || | || ||| ||| | | ||
Sbjct 3537648 TACAGTTTGATATGT-GGAATCGAAAACCAACAGATC-TTTGGGATTGGAATGATTTGAA 3537705
Query 76468 GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGC 76527
|| ||| | | || | || || ||| | | |||| ||||||||||||||
Sbjct 3537706 ATCTCGAATCGCTAAATATGGAATACGAAATAGTTTGCTTGTGGCTCCAATGCCAACAGC 3537765
Query 76528 CTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTA 76587
|| || |||||||| | || || ||||| | | ||||| || ||||| || || ||
Sbjct 3537766 TTCGACTGCACAAATTCTTGGCAACAATGAGTCTATCGAACCTTATACAACTAATATATA 3537825
Query 76588 C 76588
|
Sbjct 3537826 C 3537826
>seq1101
Length=1082900
Score = 89.7 bits (98), Expect = 6e-13
Identities = 298/452 (66%), Gaps = 14/452 (3%)
Strand=Plus/Plus
Query 75876 TTTGGAAGGCTATTCTCAAATCAC--AGACGGAGACTGGAACACCATATATGCTTTACAA 75933
|||||| ||| ||| | | |||| | | ||| ||||||| || |||||| ||| ||
Sbjct 175597 TTTGGATGGCAATTTT--AGTCACTCAAATGGAAACTGGAAACCCCTATATGGTTTTTAA 175654
Query 75934 GGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCT 75993
||||| || ||| |||||| | || | ||||| ||| || ||| ||| |
Sbjct 175655 AGATGCCGCAAATCGAAAGTCTAACCAGCAAAACCTCGGAACCATCCAGTCCTCCAATTT 175714
Query 75994 TTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053
|| || ||| || | | ||||| | ||||| | ||| |||| ||| | || ||
Sbjct 175715 ATGTACTGAAGTTATTCAATACACTTCTCCTGATGAAATCGCTATTTGTAATCTTGCTTC 175774
Query 76054 AATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTTTTGATTATGAAAAACTTC 76112
||| | |||||||| ||||| || || | || | || ||||| || ||| |||
Sbjct 175775 AATTTCACTTCCAAAATATGTAAACCAAAAAGAATTT-ACATTTGACTAC--AAATCTTT 175831
Query 76113 --ATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTA 76170
|||||||||| ||| ||| |||| ||||| ||| ||| | |||| ||| || ||
Sbjct 175832 GTATGAAATCACCAAGGTTGCTACCGTCAATCTGAACAAAGTGGTCGACACAAACTTCTA 175891
Query 76171 TCCCGTTGAGACTGCGCGAAAGTCT-AATATGCGACACAGACCTATTGGTTTGGGTGTTC 76229
| | | || | | |||| ||||||| ||||| || ||||| | ||||| |
Sbjct 175892 CCACTTGGAAGAAG-GAAAAAGAAGCAATATGCTGCACAGGCCAATTGGAATCGGTGTGC 175950
Query 76230 AAGGTCTCGCGGATGTATTTATTTTGTGCCG-CTACGCATTTGATTCAGATGAAGCCAAG 76288
||||| | |||||||| | | |||| |||| | ||||| | | || || |
Sbjct 175951 AAGGTTTAGCGGATGTGTATCAATTGTTAGAACTAC-CTTTTGACACGAAGGATGCTGAC 176009
Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTA 76320
|| ||| || |||||||||||||| ||
Sbjct 176010 ATTATCAATCAACGAATCTTTGAAACCATTTA 176041
>seq768
Length=1243675
Score = 84.2 bits (92), Expect = 3e-11
Identities = 171/250 (68%), Gaps = 7/250 (3%)
Strand=Plus/Minus
Query 14333 GACTTGAAGCGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTG 14392
||| || ||||||| ||| | | |||| ||| || || ||||| | ||| | ||||||
Sbjct 749023 GACGTGCAGCGCTCGATTCCGAACATGGTGGACGGGCTGAAGCCGGCGCAGCGCAAAGTG 748964
Query 14393 ATGTATGCTTGCTTCCATAAGAATCTCAAG-GAT--GAAATGAAGGTGGCACAACTGGCG 14449
|||| | ||| | ||||| ||| | | | |||||||||||||| || | ||
Sbjct 748963 CTGTACGGCGCGTTCAAAAAGAACCTCGTGCGCTCGGAAATGAAGGTGGCGCAGTTCGCA 748904
Query 14450 GCATATGTCGCGGACAAGTCTGC--GTACCACCATGGTGAAGTATCCTTAGCGGACACGA 14507
|| ||||| ||| ||| || |||||||| || |||| ||| | ||| | |||
Sbjct 748903 AGCTACGTCGCAGAC--GTCAGCAGCTACCACCACGGCGAAGAATCGATTGCGCAGACGG 748846
Query 14508 TTGTTAAGTTGGCAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTG 14567
| || || |||| | | | | || | |||||| | ||||| ||||| ||||| |
Sbjct 748845 TCGTGAACATGGCGCAGCAGTTCGTCGGAACGAACAACCTGAACCTGCTTGAGCCGTGCG 748786
Query 14568 GTCAATTTGG 14577
|||| |||||
Sbjct 748785 GTCAGTTTGG 748776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596559741687360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |