Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 349 7e-91
seq391 167 5e-36
>seq1
Length=3593316
Score = 349 bits (386), Expect = 7e-91
Identities = 591/856 (69%), Gaps = 17/856 (2%)
Strand=Plus/Minus
Query 49573 CTTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTC 49632
|||||||||||||| | ||||||||||||||||||| | || ||||||| |||||| |
Sbjct 930074 CTTCTAATGATATTTGTTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCAC 930015
Query 49633 CTATC-AATACATATAATAATCTATCGGCTACAA-ATTCAACATATTGTGACATTAATTC 49690
||| ||| || ||||| | |||||| |||| |||||| ||| | ||||||||||
Sbjct 930014 A-ATCTAATTCAACCAATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTT 929957
Query 49691 ACAATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttc 49750
| ||||||||| | ||| | |||||||||||| || |||||||| ||| || |
Sbjct 929956 AGCATTCATACCGATCAATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATT 929897
Query 49751 tacagcttgtttaattatcataattatattatt--ttttgataatttatattta---ata 49805
||||| | |||| || || | ||| || |||| || | ||| |||
Sbjct 929896 AACAGCATCAATAATAAT-----TTCAACAATTCGTTGTGATGATGGACGATTACGAATA 929842
Query 49806 tgattcgcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAAT 49865
|||| | | | | ||| ||||||||| |||||| || || || | || || |||
Sbjct 929841 TGATG---AAACAAAAGACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAAT 929785
Query 49866 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 49925
||||| ||| || | || ||||||| || | ||||| |||||||| |||| ||||
Sbjct 929784 TCATTTGAAAAGGTAAGACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCA 929725
Query 49926 AAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAAC 49985
|| || ||||| ||||| || || ||| |||||||| |||| | | | ||||
Sbjct 929724 AATGAACCGGAAAAAAATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAAT 929665
Query 49986 ATTAATTTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGT 50045
| | ||||||| | ||||| ||||||||| | |||||||| | | | |||||
Sbjct 929664 GTAACCGAATCATCTTGTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGT 929605
Query 50046 ATATTTTCTATAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNN 50105
| ||| |||||| || |||| || || |||||
Sbjct 929604 AGATTACGTATAGCATTGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTA 929545
Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165
|| ||||| ||||||||||| ||||| ||| ||| ||||| ||||||||| ||||||
Sbjct 929544 ATCAATAATGAATACATTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAA 929485
Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225
| |||||||| || || || || || |||||| ||||||| ||| |||
Sbjct 929484 CAACGTGCTTCTGGTATTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACA 929425
Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285
||||||||| ||| || || || || || || | | ||| ||||||||||||||
Sbjct 929424 ATACCATCACTTGCAGCAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAA 929365
Query 50286 TTTAAATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAT 50345
||||| || | |||| | ||||||| | || |||||||||||| | ||||||||||
Sbjct 929364 TTTAATTTATTCCAATGTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAAT 929305
Query 50346 GATGCTACGGATTTTTTATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACA 50405
|||||| | | |||||| |||||| | |||||| || || ||| ||||| | |||
Sbjct 929304 GATGCTTCAGCTTTTTTGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACA 929245
Query 50406 TATCGTTTAGTATTTT 50421
| || || | |||||
Sbjct 929244 AAACGATTTGGATTTT 929229
Score = 172 bits (190), Expect = 1e-37
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | ||| || ||||| |||||||| || | ||||| ||| |||||||| ||
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|||||||| |||| ||||||||||| || |||||||| || | ||| ||||| |||||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| |||||||| ||||| ||||| ||| ||||| |||| ||| || | ||| |||
Sbjct 1031720 ATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACT 1031779
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| | || ||||||||||| || |||||||| | || || ||||||
Sbjct 1031780 TCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | | ||| ||||| |||||||| || | ||||| |||||||||||
Sbjct 1033024 ATTCCACCACGTAAACGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCC 1033083
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| |||||||| |||| || | |||||||||||||||||| |||| || ||||| |||
Sbjct 1033084 GACAATGTTCGGCCATCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGT 1033143
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||||||||| || |||||| ||| ||||| |||| || || | |||
Sbjct 1033144 GGAATACCTTCTTTATCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCG 1033203
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | |||||||||||| ||||| || ||||| | || || |||||
Sbjct 1033204 ACTTCCAAAGTAATGGTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 170 bits (188), Expect = 4e-37
Identities = 178/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
||||| || | ||||| ||||| ||||| || || | || ||| || |||||||||||
Sbjct 1033252 ATACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGA-ATATTATAATC 1033310
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| || || || |||| ||||||||||||||||||||||| |||| || ||||| ||
Sbjct 1033311 GGACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGG 1033370
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || |||||||||||||| ||||| ||| ||||| || | || || | |||
Sbjct 1033371 TGGAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTC 1033430
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||| |||||||||||||| |||||||| | || || |||||
Sbjct 1033431 GACTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | ||||| ||||| ||||| ||||| | |||||| ||| || |||||
Sbjct 1032281 ATACCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCC 1032340
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||||||| || |||| || ||||||||||| |||||||| || | || || || |||
Sbjct 1032341 GATAATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGT 1032400
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||| |||||||| || ||||| || ||||| || | ||| || | |||
Sbjct 1032401 GGAATTCCCTCTTTATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCA 1032460
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| || |||||||||||||| |||||||| | || || |||||
Sbjct 1032461 ACGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 136 bits (150), Expect = 8e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||||| | || |||||||| || | ||||| ||||| |||||
Sbjct 1031825 ATTCCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCG 1031884
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| || || |||| ||||||||||||||||| || || || | || ||||| |||
Sbjct 1031885 GATAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGT 1031944
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || || ||||||||| || | ||| || | ||
Sbjct 1031945 GGAATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCG 1032004
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||| || ||||||||||||| || || | || || |||||
Sbjct 1032005 ACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | | || ||||| | ||| | || | ||||| || || |||||
Sbjct 1032509 ATACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCC 1032568
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| |||||||| |||| || | ||||| ||||| || || || | || || || |||
Sbjct 1032569 GACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGT 1032628
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| ||||||||||| ||||| |||||| || ||||| || | ||| || | |||
Sbjct 1032629 GGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCC 1032688
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||||||||||||||||| || ||||| | ||| ||||||||
Sbjct 1032689 ACTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
>seq391
Length=841353
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| |||||||| |||| ||||| ||||| || | ||||| |||||| || ||
Sbjct 251387 ATACCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCT 251446
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| ||| || |||||||| |||||||| ||||||| |||||||||||
Sbjct 251447 GACAAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGC 251506
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| |||||||| ||||| || ||||| |||| ||||| || | || | | ||||
Sbjct 251507 GGAATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCT 251566
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || | ||| ||||||| ||||||||||| | ||||||||||||
Sbjct 251567 ACCTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||||||| || | ||||| ||||| || | ||||| |||||| || ||
Sbjct 251159 ATACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCT 251218
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| ||| || || ||||| |||||||| ||||||| |||||| || ||
Sbjct 251219 GACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGC 251278
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || ||||| | |||||| | |||| || | |||
Sbjct 251279 GGAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCG 251338
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || || |||| || ||||| || || | ||| || || ||
Sbjct 251339 ACTTCCAAAGATATATTTTTTCCTGTTAAGGTCTTTACAAAAATTTGTAT 251388
Score = 114 bits (126), Expect = 3e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||| ||||||||||| | |||||||| | || | ||||| ||| || || || ||
Sbjct 730825 ACCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGA 730884
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| || || | || || | ||| ||||||||||| || | ||| || ||||| || ||
Sbjct 730885 TAAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGG 730944
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
||||||||||| ||||| ||||| |||| | |||| || | ||| ||
Sbjct 730945 AATTCCTTCTTTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCAC 731004
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || |||||| | || || ||||||||||| | || ||||||||
Sbjct 731005 CTCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 111 bits (122), Expect = 3e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368
|| ||||| | || || || | ||| ||||| | || ||| || || || ||||| ||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGA-ATGTTGTAATCTGA 250992
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||||| || ||| || | ||| || |||||||| ||||| | |||||||||||| ||
Sbjct 250993 CAATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGG 251052
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||||||||| || ||||| |||| || | || | ||| | |||||
Sbjct 251053 AATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTAC 251112
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||| |||| ||| |||| || || || ||||| | ||| || |||||
Sbjct 251113 TTCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984463324754700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |