Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1 327 2e-84
seq391 163 5e-35
>seq1
Length=3593316
Score = 327 bits (362), Expect = 2e-84
Identities = 609/900 (68%), Gaps = 17/900 (2%)
Strand=Plus/Minus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
|||||| ||||| | ||| |||||| ||||| |||| ||| |||||||||||||||
Sbjct 930118 TTTTTGATATTCGGCAACACGTTTTTCAAAAAAATTTGATTTACCTTCTAATGATATTTG 930059
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATA 38949
| ||||||||||||||||||| | || ||||||| |||||| | ||| ||| || |
Sbjct 930058 TTCCATAAAATCAAATGGATTTGTTGTTTTATAATGTTTTTCACA-ATCTAATTCAACCA 930000
Query 38950 ATAATCTATCGGCCACAA-ATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
|||| | |||||| |||| |||||| ||| | ||||||||| | ||||||||| |
Sbjct 929999 ATAAACGATCGGC-ACAATATTCAATATAATCGGACATTAATTTAGCATTCATACCGATC 929941
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
||| | |||||||||||| || |||||||| ||| || | ||||| | ||||
Sbjct 929940 AATGATACTGGTAATGCATCGGTAAGAAATTCTTGTTCAATATTAACAGCATCAATAATA 929881
Query 39069 atcataattatattatt--ttttgataatttatattta---atatgattcgcatataGTA 39123
|| || | ||| || |||| || | ||| ||||||| | | | |
Sbjct 929880 AT-----TTCAACAATTCGTTGTGATGATGGACGATTACGAATATGATG---AAACAAAA 929829
Query 39124 AACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 39183
||| |||||||| |||||| ||||| || | || || |||||||| ||| || |
Sbjct 929828 GACAGGCAAAATCACAATGTAATCCTTCATCACGTGAAATCAATTCATTTGAAAAGGTAA 929769
Query 39184 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 39243
|| ||||||| || | ||||| |||||||| |||| |||||| || ||||| |
Sbjct 929768 GACCAGGCATTAGGCCACGTTTTTTTAGCCAAAAAATTGCTGCAAATGAACCGGAAAAAA 929709
Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTA 39303
|||| || || ||| |||||||| |||| | | | |||| | | |||||||
Sbjct 929708 ATATTCCTTCAACAGCAGCAAATGCAATTAAACGTTCGGCAAATGTAACCGAATCATCTT 929649
Query 39304 AAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTT 39363
||||| ||| ||||| | |||||||| | | | |||||| ||| |||||| |
Sbjct 929648 GTGTCCAACGTATAGCCCATTTAGCTTTTTTCTCTACACAAGGTAGATTACGTATAGCAT 929589
Query 39364 TAAATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACA 39423
| |||| || |||||||
Sbjct 929588 TGAATAGAAAATCTTGTTCATTACGATCCGATACATAGGTATTAATCAATAATGAATACA 929529
Query 39424 TTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAAT 39483
|||| ||||| ||| ||| ||||| ||||||||| |||||| | ||||||||
Sbjct 929528 TTTCTGAATGAACATTTTCGATAGCAATTTGAAATCCATAAAAACAACGTGCTTCTGGTA 929469
Query 39484 ACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTG 39543
|| || || || || |||||| ||||||| ||| |||||||||||| ||| |
Sbjct 929468 TTTGTACATCACGAATAAAACGTTCAGCTAAATTTTCATTAACAATACCATCACTTGCAG 929409
Query 39544 CGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCAAG 39603
| || || || || |||| | ||| |||||||||||||| ||||| || | ||||
Sbjct 929408 CAAAAAAAGCCAATACATGTGAAATGAAATGTTTTTCATTCGAATTTAATTTATTCCAAT 929349
Query 39604 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTT 39663
| ||||||| | || |||||||||||| | ||||||||| |||||| | | |||||
Sbjct 929348 GTACAAGATCATGGCTTAGATCTACTTCTTCAACTGTCCAAAATGATGCTTCAGCTTTTT 929289
Query 39664 TATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTATTTT 39723
| |||||| | |||||| || || ||| ||||| || ||| | || || | |||||
Sbjct 929288 TGTACATTGTCCAAATATCATGATATTGAATTGGAAACAAAACAAAACGATTTGGATTTT 929229
Score = 163 bits (180), Expect = 5e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| || | || || ||||| ||||| || || | || || ||||||||||||
Sbjct 1033252 ATACCGCCACGTAGACGCAATACCAAATGCAATGTTGATTCCTTTTGAATATTATAATCG 1033311
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || | || |||||||||||||||||||| || |||| || || || |||
Sbjct 1033312 GACAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGT 1033371
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||||||||| ||||| ||| ||||| || || || || | |||
Sbjct 1033372 GGAATGCCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCGATGGTGTCCGATGGTTCG 1033431
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| |||||||||||||| |||||||| | ||| || |||||
Sbjct 1033432 ACTTCCAAAGTGATGGTTTTACCAGTCAATGTTTTTACGAAGATTTGCAT 1033481
Score = 159 bits (176), Expect = 6e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
||||| | |||||| ||||| |||||||| || | ||||| || |||||||| ||
Sbjct 1031600 CCACCACGAAGTCGCAATACCAAATGTAATGTCGATTCTTTTTGGATGTTATAATCGGAC 1031659
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
|| | ||| | || ||||||||||| || ||||| || || | ||| || || |||||
Sbjct 1031660 AATGTTCGACCATCTTCCAATTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGTGGA 1031719
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| |||||||| ||||| ||||| ||| ||||| |||||||| || | ||| |||
Sbjct 1031720 ATACCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCGATAGTATCCGATGGTTCCACT 1031779
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| | || ||||||||||| || |||||||| | ||| || ||||||
Sbjct 1031780 TCCAAGGTGATGGTTTTACCGGTCAATGTTTTTACGAAAATTTGCATT 1031827
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914
|| ||||| |||||||| || | ||||| ||||||||||| || || | ||| |
Sbjct 1033039 CGCAATACCAAATGTAAGGTGGATTCTTTTTGTATATTATAATCCGACAATGTTCGGCCA 1033098
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| || | ||||||||||||||| || |||| || || || ||||| || |||||||||
Sbjct 1033099 TCTTCGAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTA 1033158
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
|| || |||||| ||| ||||| ||||| || || | ||| ||||| | |||||||
Sbjct 1033159 TCCTGGATTTTAGCTTTCACATTTTCGATAGTGTCCGATGGTTCGACTTCCAAAGTAATG 1033218
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||| || ||||| | ||| || |||||
Sbjct 1033219 GTTTTGCCAGTCAAAGTTTTTACGAAAATTTGCAT 1033253
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || ||||| ||||| ||||| | |||||| || || |||||
Sbjct 1032281 ATACCACCACGTAGACGCAATACCAAATGCAAAGTTGACTCTTTTTGGATGTTGTAATCC 1032340
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || | || || ||||||||||| ||||| || || | || ||||| |||
Sbjct 1032341 GATAATGTACGACCATCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGT 1032400
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||| |||||||| || ||||| || ||||| || ||||| || | |||
Sbjct 1032401 GGAATTCCCTCTTTATCCTGAATTTTTGCCTTCACATTTTCGATTGTATCAGATGGTTCA 1032460
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| || |||||||||||||| |||||||| | ||| || |||||
Sbjct 1032461 ACGTCTAATGTGATGGTTTTACCAGTCAATGTTTTCACGAAAATTTGCAT 1032510
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | || || | || |||||||| || | ||||| |||||| |||||
Sbjct 1031825 ATTCCACCACGGAGACGAAGCACCAAATGTAAGGTGGATTCTTTTTGAATATTGTAATCG 1031884
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
||||| | || | || ||||||||||||||||| ||||| || | || || || |||
Sbjct 1031885 GATAAGGTACGGCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGCTGATCTGGT 1031944
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| |||||||| || || ||||||||| || ||||| || | ||
Sbjct 1031945 GGAATACCTTCCTTATCTTGAATCTTGGCTTTTACATTTTCGATTGTATCCGATGGCTCG 1032004
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||| || ||||||||||||| || || | ||| || |||||
Sbjct 1032005 ACTTCCAAAGTGATCGTTTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1032054
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | | ||| ||||| | ||| | || | ||||| ||| || |||||
Sbjct 1032509 ATACCACCACGTAATCGCAATACGAGATGAAGTGTCGATTCTTTTTGAATGTTGTAATCC 1032568
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | ||| | || || | ||||| ||||| ||||| || | || ||||| |||
Sbjct 1032569 GACAATGTTCGGCCATCTTCAAGCTGTTTGCCAGCGAAAATCAAACGTTGCTGGTCTGGT 1032628
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| ||||||||||| ||||| |||||| || ||||| || ||||| || | |||
Sbjct 1032629 GGAATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATGGTATCCGAGGGTTCC 1032688
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| | ||||||||||||||||| || ||||| | || ||||||||
Sbjct 1032689 ACTTCCAATGTAATGGTTTTACCAGTCAAAGTTTTGACAAAAATCTGCAT 1032738
>seq391
Length=841353
Score = 163 bits (180), Expect = 5e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||| |||||||| |||| ||||| ||||| || | ||||| ||||| || |||
Sbjct 251387 ATACCTCCTCTAAGCCGTAGCACTAAGTGTAACGTCGATTCTTTCTGGATATTGTAGTCT 251446
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || || || |||||||| |||||||||||||||| ||||| |||||
Sbjct 251447 GACAAAGTTCTAGAATCTTCTAATTGTTTTCCAGCAAAAATTAATCGTTGTTGATCAGGC 251506
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| |||||||| ||||| || ||||| |||| ||||| || || || | | ||||
Sbjct 251507 GGAATTCCTTCCTTATCCTGAATTTTCGTTTTCACATTTTCAATTGTGTCAGTGGGTTCT 251566
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || || | ||| ||||||| ||||||||||| | |||||||||||
Sbjct 251567 ACCTCAAGCGAAATATTTTTACCTGTTAATGTTTTTACAAATATCTGCAT 251616
Score = 127 bits (140), Expect = 4e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||||||||| | ||||| ||||| || | ||||| ||||| || |||
Sbjct 251159 ATACCACCTCTAAGTCGAAGCACTAAGTGTAATGTGGATTCTTTCTGGATATTGTAGTCT 251218
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || || || || ||||| |||||||||||||||| ||||||||| ||
Sbjct 251219 GACAAAGTTCTAGAATCTTCTAACTGTTTTCCAGCAAAAATTAATCGCTGTTGGTCTGGC 251278
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| || || ||||| | |||||| | ||||| || | |||
Sbjct 251279 GGAATCCCTTCTTTGTCCTGAATTTTCATCTTTACACTCTCAATAGTGTCGTTGGGTTCG 251338
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
||||| | || || |||| || ||||| || ||
Sbjct 251339 ACTTCCAAAGATATATTTTTTCCTGTTAAGGTCTT 251373
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||| |||||||| || | |||||||| | || | ||||| || || || || ||
Sbjct 730825 ACCTCCTCTAAGACGAAGCACTAAATGAATTGTGGATTCTTTCTGGATGTTGTAGTCGGA 730884
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
||||| || | ||| || | ||| |||||||||||||| | ||| || || || || ||
Sbjct 730885 TAAAGTGCGGTTGTCGTCTAGTTGCTTACCAGCAAAAATAAGTCTTTGCTGATCCGGGGG 730944
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
||||||||||| ||||| ||||| |||| | ||||| || | ||| ||
Sbjct 730945 AATTCCTTCTTTGTCTTGGATTTTGGTTTTGATGGACTCAATAGTGTCATTTGGTTCCAC 731004
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || |||||| | || || ||||||||||| | ||| ||||||||
Sbjct 731005 CTCCAGGGTAATGTTCTTCCCTGTTAATGTTTTCACGAAAATCTGCAT 731052
Score = 104 bits (114), Expect = 4e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902
|| ||||| | || || || | ||| ||||| | || || ||| || ||||||||
Sbjct 250934 CCTCCTCTCAACCGCAACACCAGATGCAAAGTTGATTCCTTTTGAATGTTGTAATCTGAC 250993
Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962
|| | || || || | ||| || |||||||||||||| | |||||| ||||| ||
Sbjct 250994 AATGTCCGCGAATCGTCAAGTTGCTTTCCAGCAAAAATTAACCGCTGTTGATCAGGCGGA 251053
Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022
|| ||||||||||| || ||||| |||| || | || ||||| | ||||||
Sbjct 251054 ATCCCTTCTTTATCCTGAATTTTCGTTTTCACGCTTTCAATGGTATCGTTTGGCTCTACT 251113
Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||| ||| |||| || || || ||||| | || || |||||
Sbjct 251114 TCGAGAGAAATATTTTTTCCTGTCAAAGTTTTTACAAAAATTTGCAT 251160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905121042627600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |