Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 2e-37
seq1101 132 1e-25
seq1212 113 1e-19
seq768 87.8 5e-12
seq702 87.8 5e-12
seq448 87.8 5e-12
>seq1
Length=3593316
Score = 172 bits (190), Expect = 2e-37
Identities = 539/824 (65%), Gaps = 17/824 (2%)
Strand=Plus/Minus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
||||| ||||| || || || || |||| ||||| || || | ||| | || ||
Sbjct 3537252 TATTCCACAATTTCGGTACAAAGATTCGAACATTTGATTGTACCGAGATTTTGTTGATTT 3537193
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
||||| | |||||| ||| ||||| | |||||||| ||||| || || || ||||
Sbjct 3537192 GATTTTCGATTACAATGATCTTTGTAAACCATGTATGGTGTTCCAGTTTCGATTTGTGAT 3537133
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCGA 155809
|| ||||| | ||| || |||| ||| | ||| | | | |||| |||
Sbjct 3537132 TCAAGAATAGCAAACCAAAGAACACGAGCACGACATTG-TGATCGATATCGTTTTTCATT 3537074
Query 155810 CTCATAT--TTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||||| |||||| | | || | || ||||| |||||||| | || ||
Sbjct 3537073 TTCATAACCTTCATAAA--GTTTTTCAAATTCTTCACCCCAACAATCAAATAACCCGGGA 3537016
Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATAC 155926
|| | || || || | || ||||| ||| || ||| ||| || | ||| ||||
Sbjct 3537015 CATTCATGCGGACACATCAATGACCACATTCCATCTT-GATCTACGCGTTTCATGAATAA 3536957
Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986
|||| ||| | |||||| || | || | ||| | ||||| ||| |||
Sbjct 3536956 ATCAGGAATCCATAGAGCATAAAATAAATCACGTGCACGTAGTTCCTCCGAACCGGTATT 3536897
Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046
|| || || || || || ||||||| ||| ||| |||||||| || |||||
Sbjct 3536896 TTTGCGAAGACTTAGAAAATCAAAGATATCAGAATGCCATGGTTCCAGATAGATGGCAAA 3536837
Query 156047 ACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103
||| | ||| ||||| ||||| ||||| |||||||| |||||| | || |
Sbjct 3536836 TGCTCCAGGACGTTTGTTACCACCTTGATCAACATATCGAGCAGTATTATTGTATACGCG 3536777
Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163
|||||||||||| | ||||| || | ||||| || ||| ||||| |||||| ||
Sbjct 3536776 TAGCATAGGAATCAAGCCATTAGAGATTCCATTTGTACCGGCAATATAACTACCAGAAGA 3536717
Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223
|| | | |||||||| || ||||| ||||| | |||| || || || ||||
Sbjct 3536716 TCGGATACAATGAATATTAAGACCAATGCCACCAGCTGATTTTGAGATGATGGCACATTG 3536657
Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283
|| | |||| | ||||||||||| |||||| ||| | || ||| | || ||
Sbjct 3536656 TTTAAGCGTATCATATATACCTTCAATGCTATCATCACTCATAGTGAGCAGAAAACATGA 3536597
Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343
|||||| || ||| |||||| || ||||| | ||||||| |||||| |||| |
Sbjct 3536596 TGATAATTGCGGCCGTTTTGTTCCGGCATTGAACAACGTAGGTGATGCATGTGTAAACCA 3536537
Query 156344 CTTATTAGACATATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAAT 156400
|| | || || ||| ||||| || ||| | | |||| || | | |||||
Sbjct 3536536 ATTTTCCGATATCAAATTATATGTTTC---AATGGCAGCATCAATATCATCACGATGAAT 3536480
Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444
|| |||| | |||| ||||||||||||| | |||||||
Sbjct 3536479 ACCAATAGCACAACGCATCAACATATGCTGAGGTCTTTCTACAA 3536436
Score = 132 bits (146), Expect = 1e-25
Identities = 378/572 (66%), Gaps = 12/572 (2%)
Strand=Plus/Plus
Query 133070 AATAGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAG 133129
||| | |||||| |||| |||||| | | | || |||||| ||||| ||||||
Sbjct 929237 AATCGTTTTGTTTTGTTTCCAATTCAATATCATGATATTTGGACAATGTACAAAAAAGCT 929296
Query 133130 CAAGATTTATTTTGGAC--TTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGG 133187
||| | ||||||||| || || ||||||||| || | | || | | || |||
Sbjct 929297 GAAGCATCATTTTGGACAGTTGAA--GAAGTAGATCTAAGCCATGATCTTGTACATTGGA 929354
Query 133188 AAGCCCTTACTGGGGATGAAAAACATTTTATTTC-TATGATTTTAGCGTTTTTTGCTGCG 133246
| | | | | ||||||||||||| ||||| ||| | || || |||||||||||
Sbjct 929355 ATAAATTAAATTCGAATGAAAAACATTTCATTTCACATG-TATTGGCTTTTTTTGCTGCA 929413
Query 133247 AGTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCC 133306
||||||||||||||| ||||||||||| ||| ||||| | || || ||| | |
Sbjct 929414 AGTGATGGTATTGTTAATGAAAATTTAGCTGAACGTTTTATTCGTGATGTACAAATACCA 929473
Query 133307 GAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366
||||| ||| |||||||| | || ||||| || |||||| | ||||| | |||
Sbjct 929474 GAAGCACGTTGTTTTTATGGATTTCAAATTGCTATCGAAAATGTTCATTCAGAAATGTAT 929533
Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACA--AACTATTCAACG 133424
|| | ||| |||| || | ||| ||| ||| | | |||||||| |
Sbjct 929534 TCATTATTGATTAATACCTATGTATCGGAT--CGTAATGAACAAGATTTTCTATTCAATG 929591
Query 133425 CCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484
| || | | | |||||| | | || ||| || | |||||||| |||| || |
Sbjct 929592 CTATACGTAATCTACCTTGTGTAGAGAAAAAAGCTAAATGGGCTATACGTTGGACACAAG 929651
Query 133485 ACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544
| | | | ||||| ||| | |||| ||||||| || || || || ||||
Sbjct 929652 ATGATTCGGTTACATTTGCCGAACGTTTAATTGCATTTGCTGCTGTTGAAGGAATATTTT 929711
Query 133545 tCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603
| ||| | || ||| | ||||||||||| ||||| ||||| | | ||||| ||
Sbjct 929712 TTTCCGGTTCATT-TGCAGCAATTTTTTGGCTAAAAAAACGTGGCCTAATGCCTGGTCTT 929770
Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGA 133635
||||| || ||| | |||||| | || ||
Sbjct 929771 ACCTTTTCAAATGAATTGATTTCACGTGATGA 929802
>seq1101
Length=1082900
Score = 132 bits (146), Expect = 1e-25
Identities = 282/419 (67%), Gaps = 3/419 (1%)
Strand=Plus/Minus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| |||| |||||||| || ||| ||||||||||| |||||| ||| ||||
Sbjct 175396 TCTTCATGTCCGTGATTTTTTTTTAGTTCTAAGAATTCGAAAATATCCAAATGCCATGGC 175337
Query 156030 TCCAGATACATAGCAAA-ACTACCATTCCTCTT--GCCACCCTGATCTACATACCGAGCA 156086
|||||||| | ||||| | || ||| |||| ||||| || || ||||| || ||
Sbjct 175336 TCCAGATATACTGCAAAGCCGCCCTTTCGTCTTCCACCACCTTGGTCGACATAACGGGCG 175277
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| | |||||| || |||||||| |||| ||| ||| | | ||||| || || ||
Sbjct 175276 GTTTCATTGAAAACTTTGAGCATAGGTATAACACCGTTGCTAATACCATTTGTACCTTGA 175217
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206
|| | | || || || | ||||| ||| ||| |||| ||||||| |||||
Sbjct 175216 ATTTCAGTCCCGTGTGCCCGTATTTTATGTATAGCTAGCCCAACTCCACCTGCGTATTTA 175157
Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266
||| ||||||| || | ||||| |||| || ||||| ||||| || ||||
Sbjct 175156 CTAATAATTGCGCATTGTTTCAACGTATTATAAATTCCGTCAATTGAATCCGATTGCATT 175097
Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326
| | ||| || ||| | |||||| | ||| | || || || ||||| ||
Sbjct 175096 TGCAACAAATAACAGCTACTCATTTGAGGAAAGCGAGTTGCGGCATTAAACAGTGTGGGA 175037
Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
||||| ||||| || || || | | ||| ||||||||| ||||||| |||||
Sbjct 175036 GTTGCGTGAATGAAGTATTTCTGGCTGAGTAAATTGTATGTCTCAATAATCTTGTCAAG 174978
>seq1212
Length=1133891
Score = 113 bits (124), Expect = 1e-19
Identities = 218/318 (69%), Gaps = 8/318 (3%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
||||||||||| ||||| ||||| || | | || |||| ||||| | || ||||||
Sbjct 870044 CCAACAGCATCGATTTCATCAATAAATAAAATGCATGGAGCATTTTTACGTGCCATTGCA 870103
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| | |||| ||||| || | |||| ||||||| ||||||||| ||| || ||| |
Sbjct 870104 AACATATCTCGAACACGTGAAGGACCAACACCAACAAACATTTCTAGAAACTCGGAACCA 870163
Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209
||||| ||||| | || || ||||| || ||| ||| | |||| | || ||
Sbjct 870164 GATACAGTGATGAAAGGCACTTTAGCTTCACCGGCTGTTGCTTTGGCCAACAAAGTTTTG 870223
Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT- 289268
|| || ||||||||||| || || | || ||||| | ||| || || | ||
Sbjct 870224 CCAGTACCAGGTGGTCCAGTTAGAAGTGCGCCTTTTGGAATTTTAGCACC----TAATTC 870279
Query 289269 -ATATTTC-TCAGGGCTCTTTAA-AAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325
| | || | | || | ||||| ||| | |||| |||| | ||| |||| |||||
Sbjct 870280 GGTGTATCGTGATGGATTTTTAAGAAAATTAACAAATTCCATTATTTCCAATTTAGCCTC 870339
Query 289326 ATCACATCCTGCTACATC 289343
||||| || || |||||
Sbjct 870340 TTCACAACCAGCCACATC 870357
>seq768
Length=1243675
Score = 87.8 bits (96), Expect = 5e-12
Identities = 174/258 (67%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 251403 GGCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAG 251462
||||| ||| || || || | || || || | |||| || || || ||| | ||
Sbjct 334857 GGCGAAAAGGCCGCAGTTGTCGCAGACGTGCGCAGTGTACGCGTCGGACAAGTCGAAGAG 334798
Query 251463 CCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACC 251522
|| | ||| || ||||| || ||||| |||||||| || || ||||||||||| ||
Sbjct 334797 GCGCTCTTTGAGGATGCGAGCGGCTCCGTGCGAAATCATGCAGTCGCGCTCCATTTCGCC 334738
Query 251523 GAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCAT 251582
||| || || || || |||| || || || ||||| || || || | | ||
Sbjct 334737 GAAGCGCAGCCCGCCCGCGCGCAGCCGGCCTTCCATGGGCTGCCGCGTAAGCGCAGCAAT 334678
Query 251583 AGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAA 251642
|| ||| | |||||| || ||| || | ||||| |||||||| || |||||| |
Sbjct 334677 GGGGCCGCGCGCGCGGCTGTGCACCTTGTCGTCGACCATGTGCTTGAGCCGTTGGTAGTA 334618
Query 251643 TGCGGGACCGATGAAGAT 251660
| || |||| ||||||
Sbjct 334617 CGTAGGCCCGAAGAAGAT 334600
>seq702
Length=289099
Score = 87.8 bits (96), Expect = 5e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 233263 AAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACC 233322
|||| || |||||| || ||||| ||||||||||||||||||||||| ||| |||||
Sbjct 55467 AAATTGTGCAGCACCATGTGCAATTTGACAATCACGTTCCATTTCACCAAAACGAAGACC 55408
Query 233323 ACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTA-AAACAGTTCTTGGACCCTGAG 233381
||||||| | | ||| | | || ||||||| | || | | | || || | |
Sbjct 55407 ACCATCACGAGCACGACCTTCCATTGGTTGACGAACAAGAATCTGAAC-CGGTCCACGTG 55349
Query 233382 CACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGGACCAA 233441
|||| ||| ||||||||| | ||||||||| || | || |||||| |||||||
Sbjct 55348 CACGTGAATGAATTTTATCATCAACCATATGTTTTAATCGTTGATAATAGGTTGGACCAA 55289
>seq448
Length=62000
Score = 87.8 bits (96), Expect = 5e-12
Identities = 253/384 (66%), Gaps = 4/384 (1%)
Strand=Plus/Plus
Query 288963 TTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCt 289022
|||||| | ||||||||| |||| || ||| ||| | | || | |||| |
Sbjct 22484 TTGATTTAATGTTTGTTCTTCTTCACCACTTGTACCACCAGCCATACGTTCACCGCTACG 22543
Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082
|||| |||| | ||||| ||||| ||||| ||| | ||| || ||| || ||| ||
Sbjct 22544 TTTTCTACCGATCGCATCGATTTCATCAATATAAACAATACAAGGTGAACGTTTTCTTGC 22603
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
|||||||| |||| ||||| | ||| || |||||| || |||||| | ||||||
Sbjct 22604 TTCGGCAAATAAATCTCGCACACGAGCTGCACCTAGACCACCAATCATTTCAATAAATTC 22663
Query 289143 AGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201
||| | || | | | ||| | ||| |||||| ||| || || | |||| |
Sbjct 22664 CGAACCAT-TAATCGCTAGGAAAGGTACCGATGCTTCAGTTGCAACAGCTTTAGCCAACA 22722
Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCA 289260
|| ||||| |||||||||||| | || || || |||||| ||| || ||||
Sbjct 22723 TAGTTTTACCACATCCAGGTGGTCCTAAAAGTAATACGCCTCTTGGTATTTTAGCTCCCA 22782
Query 289261 GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320
|| ||| || | || || || | | | || |||| |||| | |||| ||||
Sbjct 22783 ACA-TTTTAAATCTTTCCGGTGATTTAAGATAATCAACAAATTCCATTATTTCAACTTTT 22841
Query 289321 GCCTCATCACATCCTGCTACATCA 289344
|| || | | || || ||||||
Sbjct 22842 GCTTCTTTTAAACCGGCAACATCA 22865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471792670169514
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